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EBI Dbfetch

ID   AUXG01000410; SV 1; linear; genomic DNA; WGS; HUM; 6279 BP.
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AC   AUXG01000410;
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PR   Project:PRJNA213624;
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DT   01-AUG-2013 (Rel. 117, Created)
DT   01-AUG-2013 (Rel. 117, Last updated, Version 1)
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DE   Homo sapiens scaf00977_reg01_ctg03, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-6279
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   "Sequencing the RPCI-11 Genome";
RL   Unpublished.
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RN   [2]
RP   1-6279
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   ;
RL   Submitted (30-JUL-2013) to the INSDC.
RL   Roche, 16 Commercial St, Branford, CT 06405, USA
XX
DR   MD5; bd8f8e681ea01ad5d59c8335ffa79035.
DR   ENA; AUXG010000000; SET.
DR   ENA; AUXG000000000; SET.
DR   ENA-CON; KE557396.
DR   ENA-CON; GL000185.
DR   BioSample; SAMN02258483.
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CC   This is a subset of the whole genome assembly of RPCI-11 containing
CC   novel regions that do not exist in the GRCh37.p11 reference
CC   assembly, GCA_000001405.12.
CC   ##Genome-Assembly-Data-START##
CC   Assembly Method       :: Newbler v. 06/07/2013
CC   Assembly Name         :: RP11_1.0_unmatched_regions
CC   Long Assembly Name    :: RP11_1.0 regions unmatched to GRCh37p11
CC   Genome Coverage       :: 39.0x
CC   Sequencing Technology :: 454; Illumina MiSeq
CC   ##Genome-Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..6279
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="RPCI-11"
FT                   /db_xref="taxon:9606"
XX
SQ   Sequence 6279 BP; 1309 A; 2491 C; 320 G; 2159 T; 0 other;
     ccattccact ccattccatt caactccaat ccaccccacc ccactcttct ccattccatt        60
     ccactccagt ccactccatt gcattccgtt ccattccatt ccattccatt ccagtgcact       120
     cctatccact ccactcaact ccatgatact ccactgcgtt tctttcgatt ctgttccatt       180
     ccattccatt ccattccatt ccactccttt ccattccact tcactccatt ccatttcatt       240
     ccattccact gctttccatt ccatttcact ctattccact ccattccact caactgcagt       300
     gcattccact ccattccatt ccactccact ccactccttt ctactcccgt cgattctatt       360
     ccactccatt ccattcaact ccaaaccact ccactccact ccattctgtt ccattccact       420
     ccacttcact ccattccaat tcattccatt caattactct ccattccatt ccattccgtt       480
     aaaatccatt ccactccatt ccattcctta aaatccattc cactccattc cactgcactc       540
     cattccactc cattccattc cactccattc aattctattg agttctcttc cattccattg       600
     cactctggtg cactccattc aactccattc cactcttctc ctttcctttc ctttcctttc       660
     cattccattg cattccactc caatccattc caatccattc cactccactg cattccattc       720
     ctctccattc ctttgcattt cactccattt cacttcattc ccctcctctc cactccactc       780
     cactccattc cattccattc cattacattc ctctcacttc cattctattc cactccattc       840
     cattcaactc caatccactc cactccactc cattccgttc cactccactc ctttccattc       900
     caatacatta cattcaatta ctctccattc cattccattc cattccactc cactccactt       960
     cattccacta cattcctttc cactccactc cactccattt cataacttgc aactccgttc      1020
     cattcaattc ccttattttt actggatctc actttgtcat cagattgaag ttcattggca      1080
     caatcttagc tcacatttta tttcaccatt ccatttcttt ccattccatt ccactacatt      1140
     gctttccatt ccaatgcact ccgatccact cctctcaagt ctgctccact cccgtccatt      1200
     ccattccttt ccactccgtt cgattccact acattccatt ccattccact ccattccact      1260
     ccactgcgtt ccactccact ctactgaact ccaagctatt cctttccatt ccactccttt      1320
     ccatgatgtt ccattccact ccattccact ccactcgatt ccactcgtac ccaaacaact      1380
     ccactcctct ccattccact gcattccatt ccactccaat tcattacatt ccattctact      1440
     ccaatccatt ccattccatt ctttatttcg actgaatctc acagtgtctc cccaagtgga      1500
     gtgccatagc ccgatcttag ctcacatttc attaaccatt cgattgcatt ccattccatt      1560
     ccattcaatt tcgttcaatt ccattccatt gtatttcatt ccgttccatt gcactctctt      1620
     tcactgctct gaactacact ccactccgtt ttattctttt ccatcccgtt ctattccatt      1680
     acattaaata cctctctact ccactccatt ccattccatt ccacctcatc ccaatccaat      1740
     ccactccact tcactccatt cccctcaact ccactccatt ccattccatt ccattccatt      1800
     ccgttccatt ccactccatt ccattccttt ccaatgcaga ccattctatt ccactctact      1860
     ccattccatt cctttttttt ctatgggttc tcattctgtc accaagatag gagtgcggtg      1920
     gccttcatca actattccat tccattccat tccattccat tccattccat tccattccat      1980
     tccattccat gctgttgcat tcccttccat tccgttgcac tccgatccac tccattcaaa      2040
     tccacgccac tcttctccat tccgttccat tccgttccat tccattgtct tctattccat      2100
     tccactccac accattccat tccactctat tcttctgcat ttcactgcat tccacttcat      2160
     tccaccccac tccacaccac tacactccat tccattgcat tcaattcccc ttcactccaa      2220
     tctactccac tcaacttcac tacactccac tccattccat tgcattccat tctttaccat      2280
     tccactctat tccatttcac ccttctccat tctactccac tccattccaa tccattcttc      2340
     tccgttccat tcctttattt tgacgggatc tcactctgtc acccagacag gaatgcagtg      2400
     gcccaatgtt agctcacatt tcatttcacc aatccattct atctcattga ataccacacc      2460
     attccattgc actccactcc attccattct actgcactcc acgccactcc tctccaatcc      2520
     attccactcc actctactgc aatccactcc actccactgc actccactcc actccattcc      2580
     attccatttc attccactac tctctgatcc accgcactca actttactcc cctccactcc      2640
     actgtgttcc attccgttcc ccacgactcc attccattcc actccactcc actacactcc      2700
     attccattcc actccagtcc actccactgc attcagttcc attccattcc gttccactgt      2760
     actccggtcc actccactca actccatgcc actccattcc gtttctttcc attcctttgc      2820
     attacattcc attccgattc attccattcc acttcactcc attccactcc attccttttc      2880
     actgcattcc actcctttcc actccattgc acttcatttc tctccattcc atttcattcc      2940
     cctccactcc actccattac attcccctcc attctattcc actccactcc atcacctcca      3000
     atccactcca ctcactccac tccattctgt tccactccac tccattccaa tccattccat      3060
     tcaattactc tgctttccat tccattccat tacactacat tccattccat tccacgccac      3120
     tccattccac ttcattccac tccattccac ttcactccac tccattccac tcaattccat      3180
     tgcattccac tccactccac tccattcgat atcatgcaac tccgtttcat tatattcctt      3240
     catttcgact ggatctcact ttgtcaccag actgaagtgc agtggcggaa tcttagctca      3300
     catttctatt caccattcca ttacattcca gtccatttca gtgcattcca ttctacaata      3360
     ttccattcaa ttccactgca cttcgatcca ctccactcaa ctgtgctcca gtccattcca      3420
     ttccattcca ttccattcca ctccattcga ttacactaca ttctcttcca ttccttttca      3480
     tttcactcca ctgtattccc ctccactcca ttccactcca ctccactgca ctccatgcca      3540
     ttcctttcca ttccactcct tttcatgatt ttccattcca ctccattcca ctctattcca      3600
     ctcctctcga ttccactcga atccagtcaa ctccactcct ctcaattcca ctgcattcca      3660
     ttccactcca atccattaca ttccactata ctgtattaca ttctattact ttatatcgag      3720
     tgattctcac tctgtcaccc atactggagt gctgtgtcca atcttagctc acatttcctt      3780
     aaccattcaa ttgcattcca ttccattcca ttccatttca taccattcca ctgcattcca      3840
     ttccattcca ctgcattcct acccactcca ctgaattcga ctccactcca ctccagtcca      3900
     ctgcactcca ttctattctg ttccattctg ttccattccg ttatgttcca ttccactcca      3960
     ctccattcta ttccattccc atctattcca ttccattcca ttccattcca ttccattcca      4020
     ttccattcca ttccattcca atgcacacca ttacattcca ttctactcca ttccattcca      4080
     gtcttttatt tcgacgggat ctctctctgt ccccaagaca ggagtgcagt ggcccaatct      4140
     tagctctcat ttcattaacc attccattct attccattcc tttcctttgc attcctttcc      4200
     attccattct tttgcattat cttccattcc acagcactcc tatctactcc attcaactcc      4260
     actcctctct tctctactct gttccgttcc tttccacttc attccattcc atcccattct      4320
     actccattcc attccattcc attccactcg actccattcc attccactcc attcctctca      4380
     atttcacccc attccacttc attccactcc actcccctcc actccattcc attccactcc      4440
     attccattcc ccagcactcc aatccactgc actcaacttc actccatgcc actccattcc      4500
     actacattct attctactcc attccactcc actccattcc attccactcc atttcactcc      4560
     acttcaatcc attccactct tctctactcc acttcattag attctattcc actccactcc      4620
     actccactcc attccattcc attccactcc attgcattcc actctactcc attccactcc      4680
     actcctttcc attacattct attccatgct gttccattcc ttaatttcga ttggatctca      4740
     cactgtcacc cagactggag tgctgcagca aaatctcagt tcaaatttca tttcaccatt      4800
     ccattgcatt ccaatccatt ccactccact ccactccact gcatttcatt ccactccact      4860
     ccactccatt ccattccatt ccattttact gcactccaat ccaatccact gaactccact      4920
     ccactccatg gcactccact ccgttccttt cccttctgtt ccactccatt ccattctaca      4980
     ccattgcatt ccattccttt attttcagtg gatctcactc tgtcactcag aatgaattgc      5040
     agtgccccaa ttttagctca catttcattc accattcaat tccattccgt tccatacaat      5100
     tcctttgaat tccattcatt ccactgaatt ctcatacagt ccaatcacct ccactccact      5160
     cctctctgtt ccattccttt ctgctccatt cacttccatt cttttccatt ccattccact      5220
     ccaatgcatt ccattccact ccattgcact acagtccact ccagtccact ccactgcact      5280
     ccattccatt ccattcaact acattttgat tcactctctt caactttact acactactct      5340
     ccactccacc caaatccact ccattccctc cactccacta aagtctactt cattcaaccg      5400
     cagtccactc cattccattc ctttccattc cattctattc cattccactc ccctgcagtc      5460
     ctctccactc aattcccttc cattccacta cagtcccctc ctttccattc cacagcacac      5520
     caatcccctc cactcaactc ttctccactc cactttgctc tactcacttc tgttactttc      5580
     cattccatta cattccattc tttccattac accagtccat tccactgcat tccattccat      5640
     tccattccat tccactgcac tccgatccac tccactcaac accatgacac tccattccac      5700
     ttgaatccat tacgctctgt tccatactat tccattacat accattccat tccactgcac      5760
     tccattctag tccactcaac tccattccaa tccattccac gcaattccac tccattactt      5820
     tccattccat tccacaccat tccactccat tccattccac cctattccaa tctattccac      5880
     tcccatccat tccactccac tccactcaat tccactcaag tccactccat tgcattccat      5940
     tcctttccat ttgactccac tgcattccga tccactccac tcaacttcaa tccattctac      6000
     tccactccac tctgttccat ttgattccat tccattcagt tccattccat tccattccat      6060
     tccattccat tccattccat tccatttcat tccatttaac tcgaatccat tccattctga      6120
     tccattccat tccactccac tccactgtac tccactgcat gccattccat tacattcaat      6180
     tccattccaa tgcattctga gccactccac tccactccac tccactccat tccattcctt      6240
     tcccttccat tccgttcctt tccattcctt tccactgca                             6279
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