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EBI Dbfetch

ID   AUXG01000407; SV 1; linear; genomic DNA; WGS; HUM; 3163 BP.
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AC   AUXG01000407;
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PR   Project:PRJNA213624;
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DT   01-AUG-2013 (Rel. 117, Created)
DT   01-AUG-2013 (Rel. 117, Last updated, Version 1)
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DE   Homo sapiens scaf00972_reg01_ctg17, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-3163
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   "Sequencing the RPCI-11 Genome";
RL   Unpublished.
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RN   [2]
RP   1-3163
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   ;
RL   Submitted (30-JUL-2013) to the INSDC.
RL   Roche, 16 Commercial St, Branford, CT 06405, USA
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DR   MD5; 64e98cb301bd6a51aa5cf1c98b3ede09.
DR   ENA; AUXG010000000; SET.
DR   ENA; AUXG000000000; SET.
DR   ENA-CON; KE557395.
DR   ENA-CON; KI270730.
DR   BioSample; SAMN02258483.
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CC   This is a subset of the whole genome assembly of RPCI-11 containing
CC   novel regions that do not exist in the GRCh37.p11 reference
CC   assembly, GCA_000001405.12.
CC   ##Genome-Assembly-Data-START##
CC   Assembly Method       :: Newbler v. 06/07/2013
CC   Assembly Name         :: RP11_1.0_unmatched_regions
CC   Long Assembly Name    :: RP11_1.0 regions unmatched to GRCh37p11
CC   Genome Coverage       :: 39.0x
CC   Sequencing Technology :: 454; Illumina MiSeq
CC   ##Genome-Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..3163
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="RPCI-11"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 3163 BP; 1086 A; 425 C; 771 G; 881 T; 0 other;
     tagtttaatc aaatggaatt gaatggaatg gaatcgaatg gcatcgaatg gaatcgattg        60
     gaatgcagtg aagtggagtg gaatggagtg gaatgaagtg gaatggaatg gggtagaatg       120
     gaattgaatg gagtggactg gattgaagtg gaaggtagtg gagtggaatg taatggggag       180
     gaatggaatt gtacggagtg gagtggagtg gaatggaatg caatgcaata gcatggaatg       240
     gaatggtgaa aagaaatgtg agctgagatt gtgcactgca ctccagcctg ggtgacagag       300
     tgaaatcctg tcgaaagaaa ggaagagaat ggaaaggatt tataatggaa tggaatggaa       360
     tggatttata atggaatgta atgcaatgta gtggagtgga gtggagtgga ttggagtgga       420
     gtggaatgga gtggaatgga attgagtgga gtggaatgga gtggagtgga atggagtgga       480
     atggaattga gaggagtgga atggaatgga atggaatgga gtgcaattga atggaatgga       540
     atggaatgga atggaatgga atggaatgga atggagtgca atggaatgga atggaatgga       600
     gtggaatgga gtggaatgga gtggagtggt atggagtgga gtgcagtgga atgaagtgga       660
     ttggagtgga atggaatgga gtggaatgga gtggagtgga gtggaatgga atggagtgga       720
     atggaatgga atgcggtgaa gtggagtgca gtggagtgga atgaagtgga atggaatggg       780
     gtggaatgga attgaatagc gtggagtgga gtgggtggaa tggactgtag tggaatggaa       840
     tttcgccgta gataaaaact agtatttccg cctaccattg agtttactta tagctaacca       900
     aaacggcact ctgtctcggg aatacagatt tgcctagagg tatcctattg cagtcaaaga       960
     aagagcaatg aggggtagaa aagtttagtg atggagacac caaagctgca ttttacaaaa      1020
     cacagtgtaa aaactttacg gattcgttct gctaacttac tacagtttac attcctctca      1080
     ggtggcagaa ttgttgagtt ttttcttaag atagaaaagc aattcagata atctgaaatc      1140
     tccacaagaa ggttaagaag cagaacagaa attattctag gcaggaagtc aatcctttaa      1200
     actgtctgtg ctccatagaa acaattgtct gcactgggag tcatatgcgg tacagacaac      1260
     agccagacct ctgatcctct catttgtgat ttcagaagaa attaccagtc aactgagtaa      1320
     ttcactgact aaagtataca tttggcactg aaagaggtta gacggataac tatttgtatc      1380
     actatattca tgaagctgga atattttcca ttactcgtat cacatccgaa tggaagattt      1440
     taaaagctct ctcatcttgt aagatggata tgaaagaaca ttgtctgaga aatgaaatta      1500
     ttaacacacc tgcgaggtgg atggaagaga aaaaaagaat aatcagcttg agttcttctc      1560
     cttgataaga caactcacta aaaacataga gagaaaaata caagtttaaa ataattaacc      1620
     agaagaagac aactccagag tttttaaatg gctgataaga ttttaatttg ctgcaagttg      1680
     aaaataacta tattgcttgt gttttaaggc acataatgag caattatatc acacatgata      1740
     ggttcagcag taaaatatta tccgttaaca gctggtactc ataaaagcat agcacaatgt      1800
     gaagatggaa ttttctaaaa taaaccatct tctgaaaact actattctgt aaatttaaaa      1860
     acaaagttta tatgttattt gtcttattta ataggtctgt gaaaaaatga gatatttgaa      1920
     aagtaggtgc taccttaatt agttctttat attagacagc tggttacagt aatgcacagt      1980
     aaggtactac atacaaatgt ggctaaattt tctgcatata ctatgtattt agcttaaatt      2040
     atttgaaatt ttatagttaa agtaacaaat gtatatttaa atgttttgac acaaattgca      2100
     aatatacctt taaaaagcat cttacactct aaatattatt tgtcacctat atatttgtct      2160
     tttctctgta ggaaatttta aatatttccc ttgaagcttt aattatttca gtctataaaa      2220
     caaactgata atgttcaaat taacaggaaa aaaaggttta cagatatgtg cacaagtatg      2280
     cacttggagt ttacataata tatataaata tatatacaaa tatttttata ttatacatag      2340
     atatacaaat atatactata tatataaaaa ctccaggaaa ggcaaggtag tcaacacgcc      2400
     tatgttgtct tgaggttaca gaaaacacag acctgtacgt tggtcaatca gtctttgcgg      2460
     aagacaagag acgacaaaga agacggagta gcctggcagc agaggtggtc ttgttacacg      2520
     gatgaaacct cacagggagc agacctcctc ttgggaagta tagttaggaa atgattttta      2580
     aaaatgtaaa cgtgccagac tcagttaatc tttcctaaac acagacaagg gagtatctca      2640
     gggaaagcct gtctatatca atgcagattt tctctacaaa tgcaaatctc cccaacaaac      2700
     acaacttttc agctattctt gtagaagaag ctatttccag tcttccgagt agccatcttg      2760
     aaataagtca aaaagttggc caggctcacg cctgtaatct cagcattttg cgaggctgaa      2820
     gtgggtagat cacctgaagt caggagttcg agaccagcct gaacaacatg gtgaaacccc      2880
     gtctctacta aatacaaaaa attagccgag tgtggtggtg catgcctgta atctcagcta      2940
     cttgggaggc tgagctagga gaattacttg accctgggag gctgaggttg cagtgagcca      3000
     agattgtgcc attgcactcc accctgggca ataaaagcaa aactccatct caaaaaaaaa      3060
     gtattttagg gtaatatttt gagtatcttt acctccatat gtacaataaa tattattgtg      3120
     atttttaatc tttactcttc tgtggagaaa acacaggtgt gat                        3163
//


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