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EBI Dbfetch

ID   AUXG01000292; SV 1; linear; genomic DNA; WGS; HUM; 3449 BP.
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AC   AUXG01000292;
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PR   Project:PRJNA213624;
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DT   01-AUG-2013 (Rel. 117, Created)
DT   01-AUG-2013 (Rel. 117, Last updated, Version 1)
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DE   Homo sapiens scaf00753_reg03_ctg03, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-3449
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   "Sequencing the RPCI-11 Genome";
RL   Unpublished.
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RN   [2]
RP   1-3449
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   ;
RL   Submitted (30-JUL-2013) to the INSDC.
RL   Roche, 16 Commercial St, Branford, CT 06405, USA
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DR   MD5; 9fb21a57e30d90586750944c7ebf0a67.
DR   ENA; AUXG010000000; SET.
DR   ENA; AUXG000000000; SET.
DR   ENA-CON; KI270739.
DR   ENA-CON; KE557383.
DR   BioSample; SAMN02258483.
DR   Ensembl-Scaffolds; AUXG01000292.1:1-3449; homo_sapiens.
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CC   This is a subset of the whole genome assembly of RPCI-11 containing
CC   novel regions that do not exist in the GRCh37.p11 reference
CC   assembly, GCA_000001405.12.
CC   ##Genome-Assembly-Data-START##
CC   Assembly Method       :: Newbler v. 06/07/2013
CC   Assembly Name         :: RP11_1.0_unmatched_regions
CC   Long Assembly Name    :: RP11_1.0 regions unmatched to GRCh37p11
CC   Genome Coverage       :: 39.0x
CC   Sequencing Technology :: 454; Illumina MiSeq
CC   ##Genome-Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..3449
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="RPCI-11"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 3449 BP; 1442 A; 742 C; 575 G; 690 T; 0 other;
     ccatcgagac taggaagaaa ctgcatcaac taacgagcaa aataaccagc taacatccta        60
     atgacaggat ccaattcacc cataacaata ttaactttaa atgtaaatgg actaaacgct       120
     ccaattaaaa gacacagact ggcaaattgg ataaagagtc aagacccatc agtgtgctgt       180
     gtttaggaaa cccatctcac atgcagagac acacataggc tcaaaataaa aggatggagg       240
     aagatctacc aagcaaatgg aaaacaaaaa aagcaggagt tgcaatccta gtctctgata       300
     aagcagactt taaaccaaca aagatcaaaa gagacaaaga aggccattac ataatggtaa       360
     agggatcaat tcaacaagaa gagctaacta tcctaaacgt atatgcaccc aatacaggag       420
     cacccagatt cataaagcaa gtcctgagtg acctacaaag agacttagac tcccacacat       480
     taataatggg agactttaac accccactgt caacattaga cagatcaatg agacagaaag       540
     tcaacaagga tacccaggaa ttgaactcag ctctgcacca agcggaccta attgacatct       600
     acagaactct ccaccccaaa tcaacagaat atacattttt ttcagcacca caccacacct       660
     attccaaaat tgaccacata tttggaagta aagctctcct cagcaaatgt ataataacag       720
     agattataac aaactatctc tcagatcaca gtgcaatcaa actagaactc aggattaaca       780
     atctcactca aaaccactca actacatgga aactgaacaa cctgctcctg aatgactact       840
     gggtacataa cgaaatgaag gcagaaataa agatcttctt tgaaaccaac aagaacaaag       900
     acacaacata ccagaatctc tgggacgcat tcaaagcagt gtgtagaggg aaatttatag       960
     ctctaaattc ccacaagaga aagcaggaaa aatccaaaac tgacacccta acatcacaat      1020
     taaaagaact agaaaagcaa gagcaaacac attcaaaagc taacagaagg caagaaataa      1080
     ctaaaatcag agcagaactg aaggaaatag agacacaaaa aacccttcaa aaaaattaat      1140
     gaatccagga gctggttttt tgaaaagatc aacaaaattg atagaccgct agcaagacta      1200
     ataaagaaaa aaagggagaa gaatcaaata gacacaataa aaaatgataa aggggatatc      1260
     accaatgatt ccacagaaat acaaactacc atcagagaat actacaaaca cctctacgca      1320
     aataaactag aaaatctaga agaaatggat aaattcctgg acacatacac tctcccaaga      1380
     ctaaaccagg aagaagttga atctctgaat agaccaataa caggatctga aattgtggca      1440
     ataatcaata gcttaccaac caaaaagagt ccaggaccag atggattcac agccgaattc      1500
     taccagaggt acaaggagga actggtacca ttccttctga aactattcca atcaatagaa      1560
     aaagagggaa tcctccctaa ctcattttat gaggccagca tcattctgat accaaagcca      1620
     ggcagagaca caaccaaaaa agagaatttt agaccaatat ccttgatgaa cattgatgca      1680
     aaaatcctca ataaaatact ggcaaaacga atccagcagt acatcaaaaa gcttatccac      1740
     caagatcaag tgggcttcat ccctgggatg caaggctggt tcaatataca caaatcaata      1800
     aatgtaatcc agcatataaa cagagccaaa gacaaaaacc acatgattat ctcaatagat      1860
     gcagaaaaag cctttgacaa aattcaacaa tgcttcatgc taaaaactct caataaatta      1920
     ggtattgatg ggacacattt caaaataata agagctatct atgacaaacc cacagccaat      1980
     atcatactga atgggcaaaa actggaagca ttccctttga aaactggcac aagacaggga      2040
     tgccctctct caccactcct attcaacata gtgttggaag ttctgcccag ggcaattagg      2100
     caggagaagg agatacagtg tattcaatta ggaaaagagg aagtcaaatt gtccctgttt      2160
     gcagacgaca tgattgtata tctagaaaat cccattgtct cagcccaaaa gctccttaag      2220
     ctgataagca acttcagcaa agtctcagga tacaaaatca atgtacaaaa atcacaaaca      2280
     ttcttataca ccagcagaca aacagagagc caaatcgtga gtgaactccc attcacaatt      2340
     gcttcaaaga gaataaaata cctaggaatc caacttacaa gggatgtgaa ggacctcttc      2400
     aaggagaact acaaaccact gctcaaggaa ataaaagagg atacaaacta atggaagaac      2460
     attccatcat catggatagg aagaatcaat attgtgaaaa tggccatact gcccaaggta      2520
     atttacagat tcaatgccat ccccatcaag ctaccaatga ctttcttcac agaattggaa      2580
     aagactactt taaagttcat atggaaccaa aaaagagccc gcatcaccaa gtcgatcata      2640
     ggccaaaaga acaaagctgg aggcatcaca gtacctgact tcaaactata atacaaggct      2700
     acagtaacca aaacagcatg gtactggtac caaaacacag atatagatca atggaacaga      2760
     acagagccct cagaaataac gccacatatc tacaactatc tgatctttga caaacctgag      2820
     aaaaacaagc aatggggaaa ggattcccta tttaataaat ggtgctggga aaactggcta      2880
     gccatatgta gaaagctgaa actggatccc ttccttacac cttatacaaa aatcaattca      2940
     agatggatta aagacttaaa cgttcggcct aaaaccacaa aaaccctaga agaaaaccta      3000
     ggtattacca ttcaggacat aggcatgggc aaggacttca tgtctaaaac accaaaagca      3060
     atggcaacaa aagacaaaat tgacaaatgg gatctaatta aactaaagag cttctgcaca      3120
     gcaaaagaaa ctaccatcag agtgaagagg caacctacaa aatgggagaa aattttcaca      3180
     acctactcat ctgacaaagg gctaatatcc agaatctaca atgaactcaa acaaatttac      3240
     aagaaaaaaa caaccccatc aaaaagtggg tgaaggacgt gaacagacac ttttcaaaag      3300
     aagacattta tgcagccaaa aaacacatga aaaaatgctc atcatcactg gccatcagag      3360
     aaatgcaaat caaaaccact atgagatatc atctcacacc agttagaatg gcaatcatta      3420
     aaaagtcagg aaacaacagg tgctggaga                                        3449
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