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EBI Dbfetch

ID   AUXG01000287; SV 1; linear; genomic DNA; WGS; HUM; 3691 BP.
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AC   AUXG01000287;
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PR   Project:PRJNA213624;
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DT   01-AUG-2013 (Rel. 117, Created)
DT   01-AUG-2013 (Rel. 117, Last updated, Version 1)
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DE   Homo sapiens scaf00753_reg02_ctg06, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-3691
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   "Sequencing the RPCI-11 Genome";
RL   Unpublished.
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RN   [2]
RP   1-3691
RA   Knight J., DeJong P., Ratan A., Kim H., Miller W., Sisco D., LaRochelle W.,
RA   Schuster S.;
RT   ;
RL   Submitted (30-JUL-2013) to the INSDC.
RL   Roche, 16 Commercial St, Branford, CT 06405, USA
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DR   MD5; 40ced5564cd24fbe7769e93f96692c64.
DR   ENA; AUXG010000000; SET.
DR   ENA; AUXG000000000; SET.
DR   ENA-CON; KI270738.
DR   ENA-CON; KE557382.
DR   BioSample; SAMN02258483.
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CC   This is a subset of the whole genome assembly of RPCI-11 containing
CC   novel regions that do not exist in the GRCh37.p11 reference
CC   assembly, GCA_000001405.12.
CC   ##Genome-Assembly-Data-START##
CC   Assembly Method       :: Newbler v. 06/07/2013
CC   Assembly Name         :: RP11_1.0_unmatched_regions
CC   Long Assembly Name    :: RP11_1.0 regions unmatched to GRCh37p11
CC   Genome Coverage       :: 39.0x
CC   Sequencing Technology :: 454; Illumina MiSeq
CC   ##Genome-Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..3691
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="RPCI-11"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 3691 BP; 1299 A; 787 C; 775 G; 830 T; 0 other;
     tgtgaggata tttccttttc cacagtaggc atcaaagctc tccaaatgtc cagttgcaga        60
     ttctacaaaa agagtgtttc aaaaccgatc tatcaaaaga aagggtcaac tctgtgagtt       120
     gaatgcacac atcacaaaga agtttctgag aataattctg tctagtgttt atgtgatgat       180
     attccagctt ccaatgaagt cctcgaagca cttcaaatat ccacttgcag attctacgaa       240
     aagagtgttt caaaactgct ctatcaaaaa aaggttcaac tctgtcagtt gaatgtaaac       300
     atcacaaaga aacttctgag aatgcttctg tctagttttt atgtgaagat atttcctttc       360
     ccaccttagg cctcaaagct ctccaaattt ccacttgaag attctacaaa atgatggttt       420
     caaaactgct ctatgataag gtatgttcaa ctctgtcagt tgaaggcaaa catcacaaag       480
     gtgtttctga gaattcttct ctctagtttt tatgggaaga tatttccttt tccaccacag       540
     gcctcaaagc tttccaaaag tccacttgca gattctacaa aaagagtttt tcaaacctgc       600
     tctatcaaaa gaaaggttca actctgtgag ttgaatgcac acatcacgta gaagtttctg       660
     agaatgtttc tgtctggttt tcatgtgaag atatttcctt ttccaccata agcctcaaag       720
     ttcagaaatg tctacttgca aattctacaa aaagagtgtt tcaaaacttc cctatcaaaa       780
     gaaatgttca actctgtgag ttgaatgcac acatcaaaaa gaagtttctg agaatgtttc       840
     tgtctagttt tatatgaaga tattcccatt tccaacgaat gcctcaaagc agtccaaata       900
     tccactagca gattctacaa aaagagcatt tcaaaactgc tctatgacaa attatgttca       960
     actctgtaag tagttgaatg caaacatcac aaagaagttt ctgagaatgc ttctgtccag      1020
     tgtttatgtg aagatattcc cgtttcaaac gaagacctca aagcagtaca aatatccact      1080
     tgcagatact aaaaaaagag tgtttcaaac ctgctctatc aaaagaaagt ttcaactctg      1140
     ttagttgaat gtacacatca caaaaaattt cttagaatcc tgctgtctag tttttatgtg      1200
     aagatattcc cgtttccagt gaaggcctct aagcggtcca aatatccact tgcagattct      1260
     tctaaaagag ttttttggag ggaggaccca agatggccga ataggaacag ctctggtcta      1320
     cagctcccag cctgagtgac gcagaaaatg ggtgacttct gcatttccat ctgaggtacc      1380
     aggttcacct cactagggag tgccagacag tgggcgcagg tcagtgggtg cgctcaccat      1440
     gcacgagctg aagcagggcg aggcattgcc tcacttggga agtgcaaggg gtcagggagt      1500
     gtcctttctg agtcaaagaa aggggtgatg gatgcacctg gaaaatcggg tcactcccac      1560
     ccaaatattg cacttttcgg actggcttaa aaaatggcgc accacgagat tatatcccgc      1620
     acctggctcg gagggtccta tgcccatgga gtctcgctga ttgctagcac agcagtctga      1680
     gatcaaactg caaggcagca gtgaggctgg gggaggggca ccccccattg cccaggcttg      1740
     cttaggtaaa cgaagcagtc aggaagctcg aactgggtgg agcccaccac agctcaagga      1800
     ggcctgcctg cctctgtagg ctccacctct gggggcaggg cacagacaaa caaaaagaca      1860
     gcagtaacct ctgcagactt aaatgtccct gtctgacagc tttgaagaga gcagtggttc      1920
     tcccagaaca cagctggaga tctgagaacg ggcagactgc ctcctcaagt gggtccctga      1980
     cccctgaccc ccgagcagcc taactgggag gcaccccaca gcaggggcac actgacacct      2040
     cacacggcag ggtattctaa cagacctgta gctgagggtc cagtctggta gaaggaaaac      2100
     taacaaacag aaaggacatc cacaccaaaa acccatctgt acatcaccat catcaaagac      2160
     caaaagtaga taaaaccaca aagatgggga aaaaacagaa tggaaaaact ggaaactcta      2220
     aaacacagag cacctctcct cctccaaagg aacgcagctc ctcaccagca atgggacaaa      2280
     gctggatgga gaatgacttt gacgaggtga gagaagaagt cttcagacga tcaaattact      2340
     ctgagctaag ggaggacatt caaaccaaag acaaagaagt tgaaaaagtt gaaaaaaatt      2400
     tagaagaatg taaaactaga ataaccaata caaagaagtg cttaaaggag ctgatggagc      2460
     tgaaaaccaa ggctcgagaa ctatgtgaag aatgcagaag cttcaggagc cgatgcaatc      2520
     aaatggaaga aagggtatca gcaatggaag atgaaatgaa tgaaatgaag tgagaaggga      2580
     agtttagaga aaaaagaata aaaagaaatg agcaaagcct ccaagaaata tgggactatg      2640
     tgaaaagacc aaatctaagt ctgattggtg tacctgaaag tgatggggag aatgcaacca      2700
     agttggaaaa catgctgcag gatattatcc aggagaactt ccccaatcta gcaaggcagg      2760
     ccaacattca gattcaggaa atacagagaa caacacaaag atactcctcg agaagagcaa      2820
     ctccaagaca catacttgtc agattcacca aagttgaaat gaaggaaaaa atgttaaggg      2880
     caaccagaga gaaaggtcgg gttaccctca aagggaagcc catcagacta acagcagatc      2940
     tctcggcaga aacccttgaa gccagaagag agtgggggcc aatattcaac attcttaaag      3000
     aaaagaattt tcaacccaga atttcatatc cagccaaact aagcttcata agtgaaggag      3060
     aaataaaata ctttacagac aagcaaatgc tgagagattt tgtcaccacc aggcctgccc      3120
     taaaagagct cctgaaggaa gtgctaaaca tggaaaggaa caactggtac cagccactgc      3180
     aaaatcatgc caaaatgtaa agaacatcga gactaggaag aaactgcatc aactaacgag      3240
     caaaatcacc agctaacatc ataatgacag gatcaaattc acacataaca atattaactt      3300
     taaatgtaaa tggattaaat gctccaatta aaagacacag actgacaaat tggataaaga      3360
     gtcaagaccc atcagtgtgc tgtattcagg aaacctgtct cactggcaga gacacatata      3420
     ggctcaaaat aaaaggatgg aggaagatct accaagcaaa cggaaaacaa aaaaaggcag      3480
     gggttgcaat cctagtctct gataaaacag actttaaacc aacaaagatc aaaagagaca      3540
     aagaaggcca ttacataatg gtaaagagat caattcaaca agaagagcta actatcctaa      3600
     atatacatgc acccaataca ggagcaccca gattcataaa gcaagtcctg agtgacctac      3660
     aaagagactt agactcccac acattaataa t                                     3691
//


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