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EBI Dbfetch

ID   AL928759; SV 1; linear; genomic DNA; STD; HUM; 5908 BP.
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AC   AL928759;
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DT   12-SEP-2002 (Rel. 73, Created)
DT   13-DEC-2012 (Rel. 115, Last updated, Version 13)
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DE   Human DNA sequence from clone CH502-300D23 on chromosome 6
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KW   GAP_CLOSURE; HTG.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-5908
RG   Genome Reference Consortium
RA   Williams S.;
RT   ;
RL   Submitted (13-DEC-2012) to the INSDC.
RL   Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK.
RL   E-mail enquiries: grc-help@sanger.ac.uk Clone requests: Geneservice
RL   (http://www.geneservice.co.uk/) and BACPAC Resources
RL   (http://bacpac.chori.org/)
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DR   MD5; b0ecae21a0118f5fc011481ac0d529e0.
DR   ENA-CON; GL000251.
DR   Ensembl-Scaffolds; AL928759.1:1-5908; homo_sapiens.
DR   IMGT/HLA; DQA1*05:01:01:02; HLA06618.
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CC   -------------- Genome Center
CC   Center: Wellcome Trust Sanger Institute
CC   Center code: SC
CC   Web site: http://www.sanger.ac.uk
CC   Contact: grc-help@sanger.ac.uk
CC   --------------
CC   
CC   This sequence was finished as follows unless otherwise noted: all regions
CC   were either double-stranded or sequenced with an alternate chemistry or
CC   covered by high quality data (i.e., phred quality >= 30); an attempt was
CC   made to resolve all sequencing problems, such as compressions and repeats;
CC   all regions were covered by at least one subclone; and the assembly was
CC   confirmed by restriction digest, except on the rare occasion of the clone
CC   being a YAC.
CC   This sequence was generated from part of bacterial clone contigs
CC   constructed by the MHC Haplotype Consortium and collaborators.
CC   
CC   CH502-300D23 is from a CHORI-502 human bac - COX cell line library
CC   VECTOR: pTARBAC2.1
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FH   Key             Location/Qualifiers
FH
FT   source          1..5908
FT                   /organism="Homo sapiens"
FT                   /chromosome="6"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="CHORI-502"
FT                   /clone="CH502-300D23"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 5908 BP; 1834 A; 1176 C; 1215 G; 1683 T; 0 other;
     tcaagacacc tgctgtttct atcttgcaca ggagagcttt ccagcacctg tgataagcct        60
     cagcccccct gctggataat gagtccacat gaatggagac aggcccccta tatctgccaa       120
     acctattgat gctacagaga tgtgaggggg cccacctgag aaaagctgaa cctgcccagt       180
     acataaagac cactcaggtg ggttaagcac aatttgctgt cttacagaat cataaggaga       240
     tactaaacca ttatttgaag tcattaaatt ttggaatact ttgttacata gaaaatctga       300
     cagataaaac agccttcaaa aaaattgtgt ttttcagcaa tgtcttagtg cttctgtggc       360
     tcacaggctc ccacatgcct ggagtgctac ggggagaagg ttaaatgaat gaggaaaaat       420
     tgacaggctt tcccagccca aagcatgatg ttattatcat tatcattatt aatatttgtc       480
     tttatgtagc agctaccact tgggaataga tgctgtatgt cagacaccag attgtattta       540
     actttataat tgcacttatc tatcatttca ttttaccata ttaactatca cctaataatt       600
     ttccttctgt tttatagaaa ataaccttaa gactcaggta ttttgagtga cttgctcaag       660
     gtgctgcagc tgataaaatc aaaagcagca tggaatacat atttatctta ttacaaaacc       720
     tatattcttt tcactgtgct actctagact ctgttattgt tgtgaagcac ctttaaccac       780
     tgcaagacag aagtcttggc cttcagagta aaactttacc agtgcataaa gtcagactaa       840
     aataatttga aaatatacag agtcttagag aacgttataa ctgtttatta gaactaacat       900
     aaattctacc taatttctta gagggctctt aatgatgtga attataatgg cacatcccat       960
     tgctatttta gttatggaat caatggcatg tcaataagtg ctttctgaga aaattgttgg      1020
     acaaagtact attttgaact ccaaatttta ttcccactat taatttatga agagaacctt      1080
     ttctctttct actagacaaa ggtaacaaat tagcttttgt taaaatggca tactgttctt      1140
     ctgagtttca tttacttatt actttacctt acattaaaat tatgacctga agacagaagg      1200
     aactggaaca atgttcactg tgttatggcc ggatgaagca ggaagaggag aagagacaaa      1260
     actaggttaa aggtagaaat gtcatctgtt gggccaggcg tggcctcacg cctgtaattc      1320
     cagcactttg ggaggccgag gcgggcggat catgtggtca ggaggtcgag accatcctgg      1380
     ctaacacggt gaaaccctgt ctctactaaa aatacaaaaa attagccagg cgtggtggca      1440
     ggtgcttgta gtcccagcta cttgcagtga gccgagatcg cgccactgcc ctccagcctg      1500
     ggcgacagag caagactctg tctcaaaaaa aaaaaaagaa aagaaaagaa gtgcatctat      1560
     aatctcttca atgactttgc cttggacttt cccttcaccc cacaggatgt gagatctgaa      1620
     actgcaccct caacttccca tccaagatgc aattctaatc ctacatttaa caccctaact      1680
     tcttaactgg agttgagtta tttaaactgt aattttaata ggtgaaattc tggactacca      1740
     tcccaaaaca ttttgttcat ttgccaaagt cctaaggaat ttccattaga tacaaagcag      1800
     gtaagtctgg atacaggaaa aaaaataaaa acatgttatt tgctacacag caaaaaggat      1860
     attgagtggt aaagggagca catctcaaat gggacctcaa aaaccctctt cattcacaat      1920
     ggcaggagct agaaagaata aagccaccta tagggtcaaa tatctctcct aatcatgtta      1980
     aggcactgga ttctgaattc gcacagaagg agactctcac ccatcactcc tcacaaggac      2040
     tcatggcttg ccccatagca tcacatctgt gctgcttacc agctgtgtga ccctgggaaa      2100
     agtccttcaa ctctctggga tttaatgtcc tccttggaaa atgagaatga tattaaaata      2160
     tgacaagtat atgtaaagag tccaggaatt tttcattcca agtacagtat atgtatattc      2220
     ctcacaactg cctaatgagg tacctcaatg cctccagcca aagaccagca ggagcatcca      2280
     agcaatgaac aagttgactt tattattcat tgcaatgatg gataaaactc accatgagaa      2340
     tcatgcagta agagattgtt ggaaccgaat aagtagaacc aggagaatac atatattaag      2400
     agaatgatgc aacgaattaa tttttgcatc tgtaggggtg ggctaggcaa atcagagatc      2460
     cactgggtgg tagttgtcag gaagggcagg ctggaactct cagcacaggc tgacacgctg      2520
     tccagagtgg aatttctttt tcctcagaga aacctcagct ctgctcttaa ggcttttcaa      2580
     cagcttagat taagctcacc cagtttttct aggataaatt cttaaagtca actgattatg      2640
     aatttcaatg acatctacaa aatatcttca cagcaacacc tagattatta gtgtttgatt      2700
     tgataactgg ggatcacagt ctagctgaca cataaaattg accataaatc aattgtaagg      2760
     tttgtgcttg ttttaggtga ttttggggag gatttaagaa tgagagattt tgcttttagt      2820
     tggattctga cagaaagtgg agggttgggg tggcaatgtt atgattgggt agcttcataa      2880
     atcctaccta gagggacaga agactatcct gaggctacag atgtgatggt aaagaagcag      2940
     taatcactcc cgagagagac atacctggtc atttttgtgg tttggacaat attcatgttt      3000
     tgtctgggtt cagacatgat gactgagcat tctggtattc tgtctcaatc cactgtgctc      3060
     acagaatcca ctgtgctcac agagtacttg tctgattctg atgttctgtg aaatccttta      3120
     tcttcaatag gagaaccaaa accacctggg agtgccagcc tagctcctag caaccccaag      3180
     gccttgttaa ttgcaaccag gcagctctca ggggtcagga catttttttt gtttcacctt      3240
     tttttttttt ttacagtctc tgccagtggg aggtaaaaca gtgttgagaa tctcagaagg      3300
     ccatttatca aggacagagt gattctaaat agatcttcca ttaacttacg gtttctatca      3360
     tatacagaaa gtagatgtat ctgaaaaaaa taataagttt tgttctaatg actaacttta      3420
     gctcaatccc tagtcccttg caaatatttg gaattttagt gtggtaggat aacaaatttt      3480
     aaaagatctg gtagtttaag aaaagaaaac catttttcta agtcagtgca attcttattc      3540
     taccctcaac ttttgacttg acattcttaa ttaaaaaaaa aaattcttag agtaattgag      3600
     ccagccaaat tttaaatgta atcaatgtcc ctaaatttcc tttaaacata tgcaagaagc      3660
     accaaaacac agaacgtaaa gattactcaa tgtaaagaaa aactgtataa aatctcatac      3720
     agttactgta gacagcacca tctggcatta taaccttttt ttattgccgt ggccaaaacc      3780
     acctggatct tttgagagct tgagaataac ttaccaaact ggatttatac aagtagaaaa      3840
     ggcaaaggtg ttgatcggct accaccagca gagatcccta ggtaggtggg gtcaacttaa      3900
     catttggaga attccatatg cactatggaa gcaaaaagaa aaagcaacta acccacatac      3960
     agaagccaga gaaaggggag gggatgggga ctgccaggga gggaaatcga ctcagggaaa      4020
     aattcctgga ggttgtaact cagaaaatcc tgaaggatgc cgtataattg atgatgtcat      4080
     ctatccacga ggctgctcag aaatgcccac ccctggccag ggcggtggct catgcctgta      4140
     atctgagcac tttgggaggc tgagatgggc agatcacgaa ttcaggagtt cgagaccagc      4200
     ctggccaaca tagtgaaact ctgtctctac taaaaataca aaaattagcc gggcgtggtg      4260
     gcaggtgcct gtaatcccag ctacttggga gggtgagaca ggagaatcac ttgaacccgg      4320
     gagtcaaagt ttgcagtgag ccgagaccat gccattgcac ctcagcctgg gtgacagagt      4380
     gagactacat ctcaaaaaaa aaaaaaaaga aagaaagaaa aaaagaaaag aaatgcccac      4440
     ccctcttgcc actggcagac atgcacacac cagagaagat tccgatttcg tgtcctccct      4500
     ctattcacag aacatttcct caagtccact ctgagtggag gctgcatcac aacaagggga      4560
     ttgccctgtc tccttccagg gctcttaata caaactcttc aactagtaac tgaggtgtca      4620
     tcatagggga tttttctaat tagccaaaac ctgacttggc agggtttggt ttgggtgtct      4680
     tcagattgcc ttgtctcgag gtcctcacaa ttgctctaca actcagaaca gcaactgcta      4740
     aggctgcctt gggaagagga tgatcctaaa caaagctctg atgctggggg cccttgccct      4800
     gaccaccgtg atgagcccct gtggaggtga agacattgtg ggtgagtgta tgagtgaggg      4860
     atgttctctg gagctggaag agaggaaatt gaagcaaaag agagaaagcg atttgcagag      4920
     aaattgtaga gatttcctaa gggtcccttc agtattaaga gatttaaaaa ttatggctgt      4980
     tcctccttca ggaaaccaga gtcccaacct actctttttg ttatctatgc tgttggcgtt      5040
     cactaaggat gctattctgt ttatattgta ttcagtgact atagcctgga ggtctctatg      5100
     tcattccatc atgattgcct caaaaattag tgaggtttcc atcaatggat aattttttat      5160
     tattaaaaat ttgtgaagta tcattctcaa atttccctga acaacttttg aagcttttcg      5220
     gatgtctcct gtagtagcgc ttggggtaaa tgattccatc aattatatac tctatagata      5280
     ttaagaaaga tgcccttttc tttctctcag acttactaac atttccacgt gggaactggc      5340
     acaggtgggg agtgggtaaa ggagtccagc aggctgaatg ccttcaacaa tcattttacc      5400
     acatggtcct catttactct cagctgcctc atatgtgtca cctcacaaat aatcaaataa      5460
     aattggcatg tagctaagct ttgtaaatag tgaaaacatg aatgtcaatt ttatttttac      5520
     atatttctat tataggtata gcttcacatt tcttttcttt tgcaaaataa ggtatccttt      5580
     tattttaaaa ttgagaattt atagtagaaa aacttggtaa attaaatcat tttattctca      5640
     aattatcaac ccaaattacc tgttcttcaa ctcatctaat gaagtcctat aaaaagaaaa      5700
     gtgggccaga catggtggct catgcctgta atcccagcac tttgggaggc cgaggcagga      5760
     ggatcctttg agcccaggag ttgagaccag cctgggcaac atagcaagac ctcatctcta      5820
     caaaaaataa aaattagcca ggtgtggtgg tgcatgcctg tggtgccagc tactcagaag      5880
     gctgcagtgg gaggactgct tgagtcca                                         5908
//


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