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EBI Dbfetch

ID   AL732361; SV 6; linear; genomic DNA; STD; MUS; 5827 BP.
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AC   AL732361;
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DT   05-MAY-2002 (Rel. 71, Created)
DT   03-MAY-2008 (Rel. 95, Last updated, Version 17)
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DE   Mouse DNA sequence from clone RP23-141E23 on chromosome 13
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KW   HTG.
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OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Mus; Mus.
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RN   [1]
RP   1-5827
RA   Smith M.;
RT   ;
RL   Submitted (30-APR-2008) to the INSDC.
RL   Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, CB10 1SA, UK.
RL   E-mail enquiries: vega@sanger.ac.uk Clone requests: Geneservice
RL   (http://www.geneservice.co.uk/) and BACPAC Resources
RL   (http://bacpac.chori.org/)
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DR   MD5; 106249d30b64221c60a00dcbe8563948.
DR   EuropePMC; PMC524412; 15364904.
DR   RFAM; RF00005; tRNA.
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CC   -------------- Genome Center
CC   Center: UK Medical Research Council
CC   Center code: UK-MRC
CC   Web site: http://mrcseq.har.mrc.ac.uk
CC   --------------
CC   
CC   This sequence was finished as follows unless otherwise noted: all regions
CC   were either double-stranded or sequenced with an alternate chemistry or
CC   covered by high quality data (i.e., phred quality >= 30); an attempt was
CC   made to resolve all sequencing problems, such as compressions and repeats;
CC   all regions were covered by at least one subclone; and the assembly was
CC   confirmed by restriction digest, except on the rare occasion of the clone
CC   being a YAC.
CC   
CC   The following abbreviations are used to associate primary accession
CC   numbers given in the feature table with their source databases:
CC   Em:, EMBL; Sw:, SWISSPROT; Tr:, TREMBL; Wp:, WORMPEP;
CC   Information on the WORMPEP database can be found at
CC   http://www.sanger.ac.uk/Projects/C_elegans/wormpep
CC   
CC   Sequence from the Mouse Genome Sequencing Consortium whole genome shotgun
CC   may have been used to confirm this sequence.  Sequence data from the whole
CC   genome shotgun alone has only been used where it has a phred quality of at
CC   least 30.
CC   
CC   RP23-141E23 is from the RPCI-23 Mouse BAC Library
CC   constructed by the group of Pieter de Jong.
CC   For further details see http://bacpac.chori.org/
CC   VECTOR: pBACe3.6
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FH   Key             Location/Qualifiers
FH
FT   source          1..5827
FT                   /organism="Mus musculus"
FT                   /chromosome="13"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="RPCI-23"
FT                   /clone="RP23-141E23"
FT                   /db_xref="taxon:10090"
FT   misc_feature    1828
FT                   /note="Clone_left_end: RP23-283N14"
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SQ   Sequence 5827 BP; 1643 A; 1201 C; 1085 G; 1898 T; 0 other;
     ttctgttgac tccagtacga cttctagtga ccacatctga caaggatatt taaccatatt        60
     taatgactct aatatttgaa atgttaggtt ctgcctaatg tatttctata gggtattgac       120
     tcaaagatta aaaaaattga gactagtcag gcatagtggc acacttttta tccagtcctc       180
     aggaggcaga ggcagctcca tttctgtgag ttccaggcca gatggagcaa tgcagtgaga       240
     ctttgtttaa acaaacaaac aaacaaacaa acaaacagaa aaccaaccaa acaacgaccc       300
     caagcaaaca aacaagatcc tgccaggtag cactcattaa ccctgggaga atctgaggca       360
     agggcctata tgtgtagttt aggccaggtt tgaaccttga tagctgagga tgaccttgac       420
     cctgctgctg ttttacagcc catgtgatgg actacagggt tgtcccatca catcaagcta       480
     caagtacttt aacgccattg tagctaaagg attgtctatc taccgttttt ctcataaatt       540
     taactttttt gctctcctta ttaacacgag tttatctccc acagtttcat ttcagcagaa       600
     gaccccgaat gactgcttat tggcttgcac gcagcctttt ggggtggtta taaaatattt       660
     tgtactatgt gtccagtaac agtcttctac ccaagactca aaagcatgat tttggaaaag       720
     aaaattttca gtttatggat gccttccgat gaccaaagta gtcgacatcc ttcgccctca       780
     tgagagatcc tccatccagg taaaccgtcc ttaatatccg acccacataa tctttgggtt       840
     ttctttgcct tgcttgcctg gccttctctt gccaggccag ataggctctc acgatgtact       900
     tctggccagt ctggaactgc tatgtagacc gggggtggga tggggttgtg aggcgggctt       960
     tttagtctgg ggtgggtctg ggatgacagt gacagagatc tgtctgcctt tgtagtttcc      1020
     gtgctggaat agcagatgta agccaccaca cctaggttgt ttctaaaagt tttaattttt      1080
     actttttttt tctttaaaaa tttttatttt taagtttttt aaaaaaatga gcaccattta      1140
     aactttcttt tgtaagccag ctctttattc caattgttag aaataagtaa ttaagaacaa      1200
     agttaggtaa ctcgatcaag atttaagata tttctcatgc tcttcagatc tgtataccaa      1260
     atttaggact tagagaaatt tggtccagga aactgaaacg ttttctgctg tttcggtttc      1320
     ttgttttttc tttcttttgt tccctactcc agagcagcca atcatagcta ccaaaaacac      1380
     cttggaagac accatacttc tctgttctga agaacgaata ggatagacga gagggaccat      1440
     attgctggct ttcatttcat ttctttcagt gaaataaaaa ctctattttt gtttgagata      1500
     atctctattt tctaatcatc ttttaaaaat ggttgcgttg tcattttctg ggtattggct      1560
     tttttcccct tacaaactaa ccagatacaa ggatacctat gtaagaaaga aaaacgccag      1620
     tgtaacaagg agcattggtg gttcagtggt agaattctcg cctgccacgc gggaggcccg      1680
     ggttcgattc ccggccaatg cactctctca cttttaagta attcttttat gaaactacca      1740
     aaatgaaaca aaacaaaaca aacaaaagtt aaaacaaaac aaaaacccaa tcacaaacaa      1800
     acaaaaggtg aaaccgaaaa aaaaattgga ttcaaaacaa ggggtttggc aagttcaaag      1860
     cttctgcaag attggtatta aaagttctga cattaagtgt gccttttgcc ctgtaacccg      1920
     aaacaattct tgctgtgctc ccgagctcca gcttcagctt gaccgatttt cagcaggaaa      1980
     aattctaagt cggtgaattc gtcgttagct ttcacattct tgtaaaggtt tcaagttact      2040
     ttttatataa tgcagaatag gtaggaactg aacagctttg tctttagtaa agatttccaa      2100
     aacactataa gctgcgcgtc agcagagtgg cgcagcggaa gcgtgctggg cccataaccc      2160
     agaggtcgat ggatcgaaac catcctctgc taacttgtct tttggacagg tttcaaggaa      2220
     aagtttcaat taggaatatc agcatttaga gtaccgaact tttcgtataa gaaccacaag      2280
     gttaaatttt gtaataacta cttatgtatt cagtaaaggt cctgagactg tcatccaggt      2340
     tcctacattt gcgatcactt cgtcatgaag tgtctggaca gatcacatct gtccagagga      2400
     tgttcatatc agccagctgt tgggctataa ttcctgtttc cagtctccaa tcgcattgtt      2460
     tttagtacga cggtaagtag tctagatctg taattacatt acagaaatat tgtttgaaaa      2520
     atatttaggg aattacttct catgggaata tatcctgtca ctgcacgcgc tcttgtagtc      2580
     gtggccgagt ggttaaggcg atggacttga aatccattgg ggtttccccg cgcaggttcg      2640
     aatcctgccg actacgtgaa tgtattttct tgacatgtag aaacttgtcc ctaccgtcag      2700
     cgtaaacatt gaaacactcc gttttctttg gttaagaact gcattttatt tcaattccat      2760
     tttcttctgt tgaatctagc aagatgtaag atcatgccgg tatgacattg aagtttgttt      2820
     cttgtctgaa ctccaaaacc tcgcctgtac atgcgtgtct actccagagt gtatttgatg      2880
     ttttgaaata aatacttcaa acaaaatttc gtttgccctg cctgtagatt gtttcggaag      2940
     acgaatttct gagtcaaaat agcagacaaa atttaaaact gttttttggc taagtttaat      3000
     taaaaaaaaa atactattgc tatttaaaat acccagagtt tctaacgcgt acagagattg      3060
     ctgtcgtaga gtaaaagtaa caaaataaaa tatataatta gcattatgtg atcaatcgat      3120
     tcattgtgac atgcggataa ggacaaatag gttaaatagg taaagcaatt tattttgtat      3180
     cctaaagtac tagtaaattc ttcgaatttt atacttagct ccttttttct tgtgtttgcc      3240
     acatgtccat atataccaag agatttctag gtgttgacac ttttttctct aaattccggt      3300
     gtagcaaatg ttgataactc tggtttggca aacacaaagt tctcattttg caaggagcag      3360
     ctagctatac ttcaaatatt ttgtagtaat acagcaactt tacaaatcca gattgcagaa      3420
     atatacatca gtcttctgac tcttggtcta atatctacca agggcattcg ttagcatagg      3480
     ccccatggtg taatggttag cactctggac tttgaatcca gcgatccgag ttcaaatctc      3540
     ggtgggacct catgacattt ttggcgcacc tccctcagaa tttatctgtg catctatagc      3600
     aagttcagaa gttagatagc aaccttagga agttacatgg catctgaaca ttttctcagc      3660
     tcatctaaac ccttccaagc tgtaaaatca gatgttttac gtctgtattt acctttcttt      3720
     tctaaagttt taccaggaac cacttttgtt ggaaactgca gattctaaac tggccaagtt      3780
     ttgtgcagac gcgaggatta gggattcgtt ttgtttatgc tggagccgaa ttcctttgta      3840
     aaggatcact gattattgtt tgaacgtcag tagattttat acatgaattt ggttctaaca      3900
     agacagaaca cgtgagatat tttttgtact ttctttctga agtaaacttg tcaagaatta      3960
     aaatctaatc cacatgctga gatcaaaatg tatgtaaata tacttcaagt attttgttat      4020
     ggacaatatt gcgtcgtact cggccccatg gtgtaatggt tagcactctg gactttgaat      4080
     ccagcgatcc gagttcaaat ctcggtggga ccttctttcc ttttgccgtt ctaccagtta      4140
     ctggatcatc ttgcttacat ttcttccagt ggctggatcc tccttctcaa ttctggtctc      4200
     tgctaagtaa gtatacgggt ggttagagag ttagctgtta gagtgtccat atttttccgc      4260
     agcaatcttt tctctggaat ctcttcaaaa tatattttcg aatgcaaaaa gaaatgttag      4320
     caataagcta acattagtta ttaggagata ttcagtgact gtttaagagt aatatggtat      4380
     agtggatttt atgctacact ttaaaatgtg ttctgtccat gttctgcttc tccttcctct      4440
     gcatccatcc acacctcatc tccttaatca cccgttagct caccttcacc tagttacaag      4500
     tgcttccctt tttaaaattt cagtttttcc ttccttttct tcaaagttac tcaaagtgaa      4560
     attgttagca tggactctgt cttggaaagg tttggggtgc agtggtgcag tgtgcttatc      4620
     ttagggttcc tcttgtttgg gacatccccc aagcccctac actcacgtgt tgacattatt      4680
     tagaagatta gctgtctatt gaaagtgcaa gcgggacttt cagtacttac ctagctgaag      4740
     gcactcagga tataccacat ctagcacttg gatttcaagc ctcagatctg tctctgtttg      4800
     gtgtcttggc ttttcatttt tgcccaaact aggaatatac ccagcatgca tagatacaca      4860
     cacctttaga cttacactct ctcttctcaa atcctacctc cttgagtaaa ggaagccctg      4920
     gcaacatcac ccacttttct tatttttctt attcattctt attaaaacac acactcccct      4980
     cccccaattg cattgggtac agaagaaaaa tggaagcata ttctctggtg tccagagaca      5040
     ggcttggatg ttagttagga tctagcctga gactcagagt ttgtccctag ggtttgtctt      5100
     ttgatgctgt gtaacctcac agcttctcca cagcacactg acgtctttga tttcaatgga      5160
     atgaggtaga aacttgatca aacaacaaga catttcacat cttgattagt atgacaatta      5220
     aagagtcact ggatatctcc tgataactaa taatgatagg tcacaggtgt tacggccttt      5280
     ctttccactg tgaccttcta catcaagtct actctgatgt acaaacacca ttgtattcta      5340
     tcttttcttt ttgtaatgaa ccaatgttct ttcttagtgt atcagttatg ccttttactg      5400
     attaggtatc tgaacagttc acctggtagc atccacctag aatgaaacct cgctcttgtt      5460
     ccttcctcca aatcacgcag cccacgtgca agtgccgcaa agccctttct tacaccttct      5520
     tgctgagtct tcccaagttt cttcttatga tgtactctta cttgcagagc aacaattcca      5580
     gttcatctga ctgcagatgt gttcttggtg atctttgctt ggtttggtgt agaaatagac      5640
     aacaataagg aatatatcaa gagaaaatac caaatgacca gttttgtcac atttttctct      5700
     ataaactaaa caaaacaaag tcctctcaga tatcccagca agtctgtttc tcaatgttca      5760
     tgctctgtta agaaccaata ataatttaac atatcccacc tgggatcctt ggagtctagg      5820
     attatgc                                                                5827
//


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