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EBI Dbfetch

ID   ABBA01238506; SV 1; linear; genomic DNA; WGS; HUM; 998 BP.
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AC   ABBA01238506;
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PR   Project:PRJNA19621;
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DT   05-JUN-2007 (Rel. 92, Created)
DT   23-AUG-2014 (Rel. 121, Last updated, Version 4)
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DE   Homo sapiens CTG_1103276966282, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-998
RX   PUBMED; 17803354.
RA   Levy S., Sutton G., Ng P.C., Feuk L., Halpern A.L., Walenz B.P.,
RA   Axelrod N., Huang J., Kirkness E.F., Denisov G., Lin Y., Macdonald J.R.,
RA   Pang A.W., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D.A., Beeson K.Y., McIntosh T.C., Remington K.A.,
RA   Abril J.F., Gill J., Borman J., Rogers Y.H., Frazier M.E., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   "The Diploid Genome Sequence of an Individual Human";
RL   PLoS Biol. 5(10):E254-E254(2007).
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RN   [2]
RP   1-998
RA   Levy S., Sutton G., Ng P., Feuk L., Halpern A.L., Walenz B., Axelrod N.,
RA   Huang J., Kirkness E.F., Denisov G., Lin Y., MacDonald J.R., Wing A.,
RA   Pang C., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D., Beeson K.Y., McIntosh T.C., Remington K., Gill J.,
RA   Borman J., Johnson J., Resnick A., Rogers Y.-H., Frazier M., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   ;
RL   Submitted (18-MAY-2007) to the INSDC.
RL   J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850,
RL   USA
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DR   MD5; 26499f2fe4c65621fd8f4ecafbad31d7.
DR   ENA; ABBA010000000; SET.
DR   ENA; ABBA000000000; SET.
DR   ENA-CON; KI270312.
DR   ENA-CON; GJ212016.
DR   ENA-CON; GJ211979.
DR   ENA-CON; GJ211895.
DR   ENA-CON; GJ211848.
DR   ENA-CON; GJ212179.
DR   ENA-CON; GJ212084.
DR   ENA-CON; GJ212142.
DR   BioSample; SAMN02981236.
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CC   DNA Donor Name: J. Craig Venter | Date of Birth: October 14, 1946 |
CC   Sex: Male | Ethnicity: Caucasian | Descent: European - England
CC   This WGS project represents a composite haploid version of the
CC   genome where the highest scoring allele contained is represented in
CC   the consensus sequence.  The number of contigs may differ from
CC   those in the PLoS Biol. paper (PloS Biology 2007 5: e254) because
CC   some short sequences were found to be foreign and thus were
CC   suppressed. Scaffolds DS486015-DS490530 represent the 4528
CC   scaffolds that are discussed in the paper.  There are fewer than
CC   listed in the paper because 12 of the original were determined to
CC   be foreign, so were omitted here.  Scaffolds DS490531-DS490620 are
CC   the remaining multi-component scaffolds, not in the set of 4528.
CC   The chromosomes are records CM000462-CM000485, assembled from the
CC   scaffolds.
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FH   Key             Location/Qualifiers
FH
FT   source          1..998
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 998 BP; 336 A; 200 C; 171 G; 291 T; 0 other;
     ggagtttctg agaatcattc tgtctaattt ttatatgaag atatttcctt ttctatcatt        60
     gacatcaaag cggaggaaat ctccacttgc aaataccaca aaaagagtgt ttcaaatctg       120
     ctctgtgtaa atgaaagttc aactctgtca gttgaataca cacaacacaa ggaagttact       180
     gagaattctt ctgtctagcc ttacatgaaa aaaaacccgt ttccaacgaa ggcctcaaag       240
     aggtgaaaat atgcacttgc agactttaca aacagagtgt ttcctaactg ctttatgaaa       300
     agaaaggtta aactctgtga gttgaacacc cacatcacaa aggagtttct gagaatcatt       360
     ctgtctaatt tttatatgaa gatatttcct tttctatcat tgacatcaaa gcggctgaaa       420
     tctccacttg caaataccac aaaaagagtg tttcaaatct gctctgtgta aatgaaagtt       480
     caactctgtc agttgaatac acacaacaaa aggaagttac tgacaattct tctgtctagc       540
     cttacatgaa aaaaacccgt ttccaacgaa ggcctcaaag aggttaaaat acccacttgc       600
     agactctaca gagtgtttcc taacagctct atgaaaagaa agttaaactc tgtgagttga       660
     acacccacat cacaaaggag tttctgagaa tcattctgtc taatttttat atgaagatat       720
     ttccttttca accattgacc tcaaagtggc tgaaatctcc atttgcaaat tccacaaaaa       780
     gagtgtttca agtctgctct gtgtaaaggt tcgttcaact ctgtgagttg aatacacaca       840
     acacgaggaa gttactgaga attcttctgt ctagcagaat atgaggaaat cccgttccaa       900
     cgatggcctc aaagaggtct gattatccac ttgcagaatt acaaacagag tgtttcctaa       960
     ctgctctatg aaagaaagtt aaactctgtg agttgacg                               998
//


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