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EBI Dbfetch

ID   ABBA01219595; SV 1; linear; genomic DNA; WGS; HUM; 990 BP.
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AC   ABBA01219595;
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PR   Project:PRJNA19621;
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DT   05-JUN-2007 (Rel. 92, Created)
DT   23-AUG-2014 (Rel. 121, Last updated, Version 4)
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DE   Homo sapiens CTG_1103276938941, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-990
RX   PUBMED; 17803354.
RA   Levy S., Sutton G., Ng P.C., Feuk L., Halpern A.L., Walenz B.P.,
RA   Axelrod N., Huang J., Kirkness E.F., Denisov G., Lin Y., Macdonald J.R.,
RA   Pang A.W., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D.A., Beeson K.Y., McIntosh T.C., Remington K.A.,
RA   Abril J.F., Gill J., Borman J., Rogers Y.H., Frazier M.E., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   "The Diploid Genome Sequence of an Individual Human";
RL   PLoS Biol. 5(10):E254-E254(2007).
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RN   [2]
RP   1-990
RA   Levy S., Sutton G., Ng P., Feuk L., Halpern A.L., Walenz B., Axelrod N.,
RA   Huang J., Kirkness E.F., Denisov G., Lin Y., MacDonald J.R., Wing A.,
RA   Pang C., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D., Beeson K.Y., McIntosh T.C., Remington K., Gill J.,
RA   Borman J., Johnson J., Resnick A., Rogers Y.-H., Frazier M., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   ;
RL   Submitted (18-MAY-2007) to the INSDC.
RL   J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850,
RL   USA
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DR   MD5; 112a8b1df94ef0498a0bfe2d2ea5cc23.
DR   ENA; ABBA010000000; SET.
DR   ENA; ABBA000000000; SET.
DR   ENA-CON; KI270385.
DR   ENA-CON; GJ211923.
DR   BioSample; SAMN02981236.
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CC   DNA Donor Name: J. Craig Venter | Date of Birth: October 14, 1946 |
CC   Sex: Male | Ethnicity: Caucasian | Descent: European - England
CC   This WGS project represents a composite haploid version of the
CC   genome where the highest scoring allele contained is represented in
CC   the consensus sequence.  The number of contigs may differ from
CC   those in the PLoS Biol. paper (PloS Biology 2007 5: e254) because
CC   some short sequences were found to be foreign and thus were
CC   suppressed. Scaffolds DS486015-DS490530 represent the 4528
CC   scaffolds that are discussed in the paper.  There are fewer than
CC   listed in the paper because 12 of the original were determined to
CC   be foreign, so were omitted here.  Scaffolds DS490531-DS490620 are
CC   the remaining multi-component scaffolds, not in the set of 4528.
CC   The chromosomes are records CM000462-CM000485, assembled from the
CC   scaffolds.
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FH   Key             Location/Qualifiers
FH
FT   source          1..990
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 990 BP; 306 A; 169 C; 197 G; 318 T; 0 other;
     tttcatagag catgtttgaa acactctttc tgtagtatct gaaaacggac atttcaagcg        60
     ctttcaggcc tatggtaaga aaggaaatat cttcaaataa aaactagaga gaagcattct       120
     cagaaactta tttgcgatgt gtgtcctcaa ctaacagagt tgaacctttg ttctgataca       180
     acattttgga aacactcttt ttgtagaatc tgcaagtgga taattggata gctttgaagg       240
     tttcgttgga aacgggaata tcttcatata aaatcaagac agaagcattc tcagaaactt       300
     ctctgtgatg tttgcattca actcatagag ttgaacactt cccttcatag agcaggtttg       360
     aaacactctt tttgtaatat ttggaagtgg acatttgcag cgctttgagg cctatgttga       420
     aaaaggaaat atcttctcct gaaaaccaga cagaagcatt ctcagaaact tccttgtgat       480
     gtgtgtactc aagtaacaga gttgaacctt acttttgaca gagccgtttt gaaacagtct       540
     ttttgtagaa tctggaagta gatatttgga cacctttgag gatttctttg gaaacgggat       600
     atcttcatat aaaatctaga cagaagcatt ctcagaaact tctttgtgct gtatgtcctc       660
     aattagcaga gttgaacctt tgtgtggata cagcattttg gaaacacccc tttagtagga       720
     tatgcaagtt gatatttaga taactaggaa gatttccttg gaaacggaat atcttcatat       780
     aaatctagac ggaagcattc tcagaaagtg ctttgtgatg tttgcattca agtcacagag       840
     ttgatattcc cttttataga gcaggtttga aacactcttt ctgcacttac ctgaagaaga       900
     cttttgcagc gctttgaggc ctatgttgaa aaaggaatat cttcccataa aactaaacag       960
     agcattctca gaaacttgtt gtgatgtgtg                                        990
//


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