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EBI Dbfetch

ID   ABBA01183396; SV 1; linear; genomic DNA; WGS; HUM; 1026 BP.
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AC   ABBA01183396;
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PR   Project:PRJNA19621;
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DT   05-JUN-2007 (Rel. 92, Created)
DT   23-AUG-2014 (Rel. 121, Last updated, Version 4)
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DE   Homo sapiens CTG_1103276887491, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-1026
RX   PUBMED; 17803354.
RA   Levy S., Sutton G., Ng P.C., Feuk L., Halpern A.L., Walenz B.P.,
RA   Axelrod N., Huang J., Kirkness E.F., Denisov G., Lin Y., Macdonald J.R.,
RA   Pang A.W., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D.A., Beeson K.Y., McIntosh T.C., Remington K.A.,
RA   Abril J.F., Gill J., Borman J., Rogers Y.H., Frazier M.E., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   "The Diploid Genome Sequence of an Individual Human";
RL   PLoS Biol. 5(10):E254-E254(2007).
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RN   [2]
RP   1-1026
RA   Levy S., Sutton G., Ng P., Feuk L., Halpern A.L., Walenz B., Axelrod N.,
RA   Huang J., Kirkness E.F., Denisov G., Lin Y., MacDonald J.R., Wing A.,
RA   Pang C., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D., Beeson K.Y., McIntosh T.C., Remington K., Gill J.,
RA   Borman J., Johnson J., Resnick A., Rogers Y.-H., Frazier M., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   ;
RL   Submitted (18-MAY-2007) to the INSDC.
RL   J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850,
RL   USA
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DR   MD5; 69ad2d85d870c8b0269434581e86e30e.
DR   ENA; ABBA010000000; SET.
DR   ENA; ABBA000000000; SET.
DR   ENA-CON; KI270336.
DR   ENA-CON; GJ211875.
DR   BioSample; SAMN02981236.
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CC   DNA Donor Name: J. Craig Venter | Date of Birth: October 14, 1946 |
CC   Sex: Male | Ethnicity: Caucasian | Descent: European - England
CC   This WGS project represents a composite haploid version of the
CC   genome where the highest scoring allele contained is represented in
CC   the consensus sequence.  The number of contigs may differ from
CC   those in the PLoS Biol. paper (PloS Biology 2007 5: e254) because
CC   some short sequences were found to be foreign and thus were
CC   suppressed. Scaffolds DS486015-DS490530 represent the 4528
CC   scaffolds that are discussed in the paper.  There are fewer than
CC   listed in the paper because 12 of the original were determined to
CC   be foreign, so were omitted here.  Scaffolds DS490531-DS490620 are
CC   the remaining multi-component scaffolds, not in the set of 4528.
CC   The chromosomes are records CM000462-CM000485, assembled from the
CC   scaffolds.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1026
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 1026 BP; 464 A; 151 C; 101 G; 310 T; 0 other;
     aactgtacat aaaatatcaa agtactcaaa ctatatcttg tacatgaaat atcaaagtac        60
     aaatactata tattgaatac cgtacataaa atatcaaagt acccaaacta tatatagtat       120
     actgtacata aaatatcaaa gtacccaaag tatgtattat atactgtaca taaaatatca       180
     aagtacccaa cgtatgcatt gtatactgta tataaaatat caaagtaccc aaagtatgta       240
     ttatatactg tacataaaat atcaaagtac ccaaagtatg tattgtatac tgtatataaa       300
     atatcaaagt gcccaaagta tgtattatat actgtccata aaatataaaa gtaaccaaag       360
     tatgtattat atactgtaca taaagtatca aggcaaccaa attatgtatt atatactgta       420
     cataaaataa caaagtaccc aaattatgta ttatatactg tacataatat atcaaagtac       480
     ccaaagtatg tactgtatac tatacacaaa atatcaaagt gcccaaagta tgtattatac       540
     actgtacata aaatatgaaa gtacccaaac atttataata aactgtataa aaaatatcaa       600
     agtactcaaa atatatactg tatataaaat atcaaagtac caaaactata tattttatag       660
     tggacataaa atatcaaagt actcaaagta tgtattgtat actgtacata aaatatcaaa       720
     gtacccaaag tatgcattat atactgtaca taaaatctca gagtacccca agtatgtatt       780
     gtatactgta cataaaatat caaagtaccc aaagtatgta ttgtatactg tacataaaat       840
     atcaaagtgc ccaaagtatg tattatatac tgtacataaa atataaaaat acccaaagta       900
     tgtattatat actgtacata aaatatcaaa gtacccaaag tatgtattat atactgtaca       960
     taaaatatca aagtacccaa ggtatgtatt acatattgta cataaaatat caacataccc      1020
     aaagta                                                                 1026
//


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