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EBI Dbfetch

ID   ABBA01179224; SV 1; linear; genomic DNA; WGS; HUM; 1750 BP.
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AC   ABBA01179224;
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PR   Project:PRJNA19621;
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DT   05-JUN-2007 (Rel. 92, Created)
DT   23-AUG-2014 (Rel. 121, Last updated, Version 4)
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DE   Homo sapiens CTG_1103276881714, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-1750
RX   PUBMED; 17803354.
RA   Levy S., Sutton G., Ng P.C., Feuk L., Halpern A.L., Walenz B.P.,
RA   Axelrod N., Huang J., Kirkness E.F., Denisov G., Lin Y., Macdonald J.R.,
RA   Pang A.W., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D.A., Beeson K.Y., McIntosh T.C., Remington K.A.,
RA   Abril J.F., Gill J., Borman J., Rogers Y.H., Frazier M.E., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   "The Diploid Genome Sequence of an Individual Human";
RL   PLoS Biol. 5(10):E254-E254(2007).
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RN   [2]
RP   1-1750
RA   Levy S., Sutton G., Ng P., Feuk L., Halpern A.L., Walenz B., Axelrod N.,
RA   Huang J., Kirkness E.F., Denisov G., Lin Y., MacDonald J.R., Wing A.,
RA   Pang C., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D., Beeson K.Y., McIntosh T.C., Remington K., Gill J.,
RA   Borman J., Johnson J., Resnick A., Rogers Y.-H., Frazier M., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   ;
RL   Submitted (18-MAY-2007) to the INSDC.
RL   J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850,
RL   USA
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DR   MD5; 694d75683e4a9554bcc1291edbcaee43.
DR   ENA; ABBA010000000; SET.
DR   ENA; ABBA000000000; SET.
DR   ENA-CON; GJ211925.
DR   ENA-CON; KI270383.
DR   BioSample; SAMN02981236.
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CC   DNA Donor Name: J. Craig Venter | Date of Birth: October 14, 1946 |
CC   Sex: Male | Ethnicity: Caucasian | Descent: European - England
CC   This WGS project represents a composite haploid version of the
CC   genome where the highest scoring allele contained is represented in
CC   the consensus sequence.  The number of contigs may differ from
CC   those in the PLoS Biol. paper (PloS Biology 2007 5: e254) because
CC   some short sequences were found to be foreign and thus were
CC   suppressed. Scaffolds DS486015-DS490530 represent the 4528
CC   scaffolds that are discussed in the paper.  There are fewer than
CC   listed in the paper because 12 of the original were determined to
CC   be foreign, so were omitted here.  Scaffolds DS490531-DS490620 are
CC   the remaining multi-component scaffolds, not in the set of 4528.
CC   The chromosomes are records CM000462-CM000485, assembled from the
CC   scaffolds.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1750
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 1750 BP; 567 A; 364 C; 297 G; 522 T; 0 other;
     ctatccaaat atccacctgt agatcctaca aaaagagtgt ttccaaatgc tgtatcaaaa        60
     caaagatcac tctgttagtt gagacacaca tggcaaataa gttctgagaa tgcttctgtc       120
     tagtttttac ttgaagatat ttcctttctc accataggcc tgaaagcgct tgaaacgtca       180
     gcttgcagat actacagaaa gagtgtttca aaccggctct atgaaaggga atgttcagtt       240
     ctgttacttg aatgcaaaca tcacaaagaa gttcctgaga atgcttctct ctagatttta       300
     tatgtaatcc cgtttccaac gaaatcctca aagctatcca aatatccact ttcagattcc       360
     acaaaaagag tgtttcaaaa ctgctctgta aaaagaaagg ttcatctctg ttagttgaat       420
     acacacatca caaagaagtt tctgagaatg cttctgtcta gtttttatgg gaagatattt       480
     cctttttcaa cataggcctc aaagcgctct aaatgtccac ctccaggtag tgcagaaaga       540
     gtgtttcaaa cctgctctat aaaagggaat attcaactct gtgacttgaa tgcaaacatc       600
     acaaagcact ttctgagaat gcttccgtct agattttatg tgaagatatt cccgtttcca       660
     aggaaatctt cctagctatc taaatatcaa cttgcagatt ctactaaagg aacgtttcca       720
     aaatgctgta tccaaacaaa ggttcaactc tgttaattga agacatacag cacaaagaag       780
     tttctgagaa tgcttctgtc tagattttat atgaagatat cccgtttcca aagaaatcct       840
     caaaggtatc gaaatatcta cttgcagatt ctacaaaaag agtgtttcaa aacggctctg       900
     taaaaagaaa ggttcatctc cgttagttga atacacacat cacaaacaag tttctgagaa       960
     tgcttctgtc tagtttttat gggaagatat ttcctttttc aacataggcc tcaaagcgct      1020
     ccaaatgtcc acttccaggt agtgcacaga gtgtttcaaa cctgctctat gaaaggaagt      1080
     gttcaactct atgagttgaa tgcaaacatc acagagaagt ttctgagaat gcttctgtct      1140
     tgattttata tgaagatatt cccgtttcca acgaaacctt aaaagctatc caaatatcca      1200
     cctgcagatc ctacaaaaag agtgtttcca aaatgctgta tcaaaacaaa ggttcaactc      1260
     tgttagttga ggacacacat cgcaaataag tttctgagaa tggttctgtc cagtttttat      1320
     gggaagatat ttcctttttc aacataggac tcaaagcgct ccaaatgtcc acctccaggt      1380
     agtgcagaaa gagtgtttca aacctgctct atgaaaggga atgttcagtt ctgtgacttg      1440
     aatgcaaaca tcacaaagaa gttcctgaga atgcttctct ctaggtttta tatgtaatcc      1500
     cgtttccaac gaaatcctca aagccatcca aatatccact ttcagattcc acaaaaagag      1560
     tgtttcaaaa ctgctctgta aaaagaaagg ttcatctctg ttagttgaat acacacatca      1620
     caaacaagtt tctgagaatg cttctgtcta gttttgatgg gaagatattt cctttttcaa      1680
     cataggcctc aaagcgcacc caatgtccac ttccaggtag tgcacagagt gttcaaacct      1740
     gctctataaa                                                             1750
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