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EBI Dbfetch

ID   ABBA01178344; SV 1; linear; genomic DNA; WGS; HUM; 1045 BP.
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AC   ABBA01178344;
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PR   Project:PRJNA19621;
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DT   05-JUN-2007 (Rel. 92, Created)
DT   23-AUG-2014 (Rel. 121, Last updated, Version 4)
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DE   Homo sapiens CTG_1103276880487, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-1045
RX   PUBMED; 17803354.
RA   Levy S., Sutton G., Ng P.C., Feuk L., Halpern A.L., Walenz B.P.,
RA   Axelrod N., Huang J., Kirkness E.F., Denisov G., Lin Y., Macdonald J.R.,
RA   Pang A.W., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D.A., Beeson K.Y., McIntosh T.C., Remington K.A.,
RA   Abril J.F., Gill J., Borman J., Rogers Y.H., Frazier M.E., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   "The Diploid Genome Sequence of an Individual Human";
RL   PLoS Biol. 5(10):E254-E254(2007).
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RN   [2]
RP   1-1045
RA   Levy S., Sutton G., Ng P., Feuk L., Halpern A.L., Walenz B., Axelrod N.,
RA   Huang J., Kirkness E.F., Denisov G., Lin Y., MacDonald J.R., Wing A.,
RA   Pang C., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D., Beeson K.Y., McIntosh T.C., Remington K., Gill J.,
RA   Borman J., Johnson J., Resnick A., Rogers Y.-H., Frazier M., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   ;
RL   Submitted (18-MAY-2007) to the INSDC.
RL   J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850,
RL   USA
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DR   MD5; 3218bef25946cd95de585dfc7750f63b.
DR   ENA; ABBA010000000; SET.
DR   ENA; ABBA000000000; SET.
DR   ENA-CON; GJ211911.
DR   ENA-CON; KI270379.
DR   BioSample; SAMN02981236.
DR   Ensembl-Scaffolds; ABBA01178344.1:1-1045; homo_sapiens.
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CC   DNA Donor Name: J. Craig Venter | Date of Birth: October 14, 1946 |
CC   Sex: Male | Ethnicity: Caucasian | Descent: European - England
CC   This WGS project represents a composite haploid version of the
CC   genome where the highest scoring allele contained is represented in
CC   the consensus sequence.  The number of contigs may differ from
CC   those in the PLoS Biol. paper (PloS Biology 2007 5: e254) because
CC   some short sequences were found to be foreign and thus were
CC   suppressed. Scaffolds DS486015-DS490530 represent the 4528
CC   scaffolds that are discussed in the paper.  There are fewer than
CC   listed in the paper because 12 of the original were determined to
CC   be foreign, so were omitted here.  Scaffolds DS490531-DS490620 are
CC   the remaining multi-component scaffolds, not in the set of 4528.
CC   The chromosomes are records CM000462-CM000485, assembled from the
CC   scaffolds.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1045
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 1045 BP; 442 A; 225 C; 171 G; 207 T; 0 other;
     agcaacttca gcaaagtgtc aggatacaaa atcaatgtac aaaaatcaca agcattctta        60
     tacaccaaca atagacaaac agagagccaa atcatgagtg aactcccatt cacaattgct       120
     tcaaagagaa taaaatacct aggaatccaa cttacaaggg atgtgaagga cctcttcaag       180
     gagaactaca aaccactgct caacgaaata aaagaggata caaacaaatg aaagaacatt       240
     ccatgctcat gggtaggaag aatcaatatc gtgaaaatgg ccatactgtc caaggtaatt       300
     tacagattca atgccatccc catcaagcta ccaatgactt tcttcacaga actggaaaaa       360
     actactttaa agttaatatg gaaccaaaaa agagcccgca tcgccaagtc aatcctaagc       420
     caaaagaaca aagctggagg catcgcacta cctgacttca aactatacta caaggctaca       480
     gtaaccaaaa cagcatggta ctggtaccaa aacagagata tagatcaatg gaacagaaca       540
     gagccctcag aaataacgcc acatatgtac aactatctga tctttgacaa acctgagaaa       600
     aacaagcaat ggggaaagga ttccctattt aataaatggt gctgggaaaa ctggctagcc       660
     atatgtagaa agctgaaact ggatcccttc cttacacctt atacaaaaat caattcaaca       720
     tggattcaag acttaaatgt tagacctaaa actataaaaa acctagaaga aaacctaggc       780
     aataccattc aggacgtagg catgggcaag gacttcatgt ctaaaacacc taaagcaatg       840
     gcaacaaaag ccaaaattga caaatgggat ctaattaaac taaagaactt ctgcacagca       900
     aaagaaacta ccatcagagt gaacaggcaa cctaaaaaat gggagaaatt ttcacaccta       960
     ctcatgtgac aaagggctaa tatccagaat ctacatgaac tcaaacaaat ttacaggaaa      1020
     aaaacaaaca accccatcaa aaagt                                            1045
//


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