Dbfetch

ID   ABBA01171814; SV 1; linear; genomic DNA; WGS; HUM; 1428 BP.
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AC   ABBA01171814;
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PR   Project:PRJNA19621;
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DT   05-JUN-2007 (Rel. 92, Created)
DT   23-AUG-2014 (Rel. 121, Last updated, Version 4)
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DE   Homo sapiens CTG_1103276871406, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-1428
RX   PUBMED; 17803354.
RA   Levy S., Sutton G., Ng P.C., Feuk L., Halpern A.L., Walenz B.P.,
RA   Axelrod N., Huang J., Kirkness E.F., Denisov G., Lin Y., Macdonald J.R.,
RA   Pang A.W., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D.A., Beeson K.Y., McIntosh T.C., Remington K.A.,
RA   Abril J.F., Gill J., Borman J., Rogers Y.H., Frazier M.E., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   "The Diploid Genome Sequence of an Individual Human";
RL   PLoS Biol. 5(10):E254-E254(2007).
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RN   [2]
RP   1-1428
RA   Levy S., Sutton G., Ng P., Feuk L., Halpern A.L., Walenz B., Axelrod N.,
RA   Huang J., Kirkness E.F., Denisov G., Lin Y., MacDonald J.R., Wing A.,
RA   Pang C., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D., Beeson K.Y., McIntosh T.C., Remington K., Gill J.,
RA   Borman J., Johnson J., Resnick A., Rogers Y.-H., Frazier M., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   ;
RL   Submitted (18-MAY-2007) to the INSDC.
RL   J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850,
RL   USA
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DR   MD5; 56b462bac20d385cdfcde0155fe4c3a1.
DR   ENA; ABBA01000000; SET.
DR   ENA; ABBA00000000; SET.
DR   ENA-CON; KI270340.
DR   ENA-CON; GJ211879.
DR   BioSample; SAMN02981236.
DR   Ensembl-Scaffolds; ABBA01171814.1:1-1428; homo_sapiens.
DR   PubMed; 17803354.
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CC   DNA Donor Name: J. Craig Venter | Date of Birth: October 14, 1946 |
CC   Sex: Male | Ethnicity: Caucasian | Descent: European - England
CC   This WGS project represents a composite haploid version of the
CC   genome where the highest scoring allele contained is represented in
CC   the consensus sequence.  The number of contigs may differ from
CC   those in the PLoS Biol. paper (PloS Biology 2007 5: e254) because
CC   some short sequences were found to be foreign and thus were
CC   suppressed. Scaffolds DS486015-DS490530 represent the 4528
CC   scaffolds that are discussed in the paper.  There are fewer than
CC   listed in the paper because 12 of the original were determined to
CC   be foreign, so were omitted here.  Scaffolds DS490531-DS490620 are
CC   the remaining multi-component scaffolds, not in the set of 4528.
CC   The chromosomes are records CM000462-CM000485, assembled from the
CC   scaffolds.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1428
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 1428 BP; 412 A; 250 C; 326 G; 440 T; 0 other;
     cttttgatag agcagtcttg aaatactgct tttgtagaat ctgcttgagg atatttggag        60
     ctcttgagga attcgttgta aacggggtat ctgcacatac aaactggacg gaagcattct       120
     cagaaacttt tttgtgatgt ctgcattcaa ctcacagagt tgaaccttcc tttgggagag       180
     cagctctgaa acagtgtttt tgcagtatca ggaagtggat atttggagcg atatgaggcc       240
     tatggtggaa aaggagatac cttcacatgg aagctacaca gaagcattct cagaaactgc       300
     tttgggatgt gtgcattcaa ctcacagagg tgaacgcttt ctttgataga gcagttgtga       360
     aacattcttg ttgcagtatc tgcaagtgtt cttttggagc gcttcgaaac ctgcggtgga       420
     aatggtaata tcgtcacata aaaactagac ggaagtttgc tcagacagtt ccttgtgatg       480
     tgcgcattga actcaaagag ttgaaccttc cttttgagaa agcagttttg aaacagtgtt       540
     ttcttacgat ctacaagtgg atatttggag cgatttgagg cctatggtgg aaaaggaaat       600
     atcttcggat aaaaactaca cagaagcatt ctcagaaact gctctgtgtt gtgttcattg       660
     aagtcaaagg gttgaactcc gtctttgata gagcagtttt gaaacattct ttttgtagaa       720
     tctgcaagtg ttcatttgga gcgctttgaa gcctagggtg caaaaggaaa tatcttcaca       780
     gaaaaaccgg acagaagcat tctcagaaac tgctttgtga tgtgtccatt gaactcacag       840
     agtccaacct ttcttttgat agagcagatt tgaggcattc tctgtgcata atctgcaagt       900
     gttcctttgg agcgctttga aggcttatgg tggaaagcaa aatatcttca cataaaaact       960
     aaacagaagc attctcagaa actgctttgg gatgtgtgca ttcaactcac agagttgaac      1020
     gctttctttg atacagcagt ttagaagcat tctttttgta gaatctgcaa gtgttcattt      1080
     ggagcgcttt gaagcctacg gtggaaaagg aaatatcttc acataaaagc tagacagaag      1140
     tattctcaga cagttctttg tgatatgtcc attcaactca cagagttgaa tctttccttt      1200
     gatagagaag attggaaaca ttctttctgc atactctgca agtgttcatt tggagcgctt      1260
     agaggctcat ggtggaaagt gaaatatctt cacatataaa ctagacagaa gcattctcag      1320
     aaacatttag ggatgtgtga actcaactca cagagttcaa ctttcctttt gatagagctg      1380
     tcttgaaatc ctgcttttgc agaatctgct tgaggatatt tggagctc                   1428
//