Dbfetch

ID   ABBA01141747; SV 1; linear; genomic DNA; WGS; HUM; 8320 BP.
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AC   ABBA01141747;
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PR   Project:PRJNA19621;
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DT   05-JUN-2007 (Rel. 92, Created)
DT   23-AUG-2014 (Rel. 121, Last updated, Version 4)
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DE   Homo sapiens CTG_1103276828445, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-8320
RX   PUBMED; 17803354.
RA   Levy S., Sutton G., Ng P.C., Feuk L., Halpern A.L., Walenz B.P.,
RA   Axelrod N., Huang J., Kirkness E.F., Denisov G., Lin Y., Macdonald J.R.,
RA   Pang A.W., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D.A., Beeson K.Y., McIntosh T.C., Remington K.A.,
RA   Abril J.F., Gill J., Borman J., Rogers Y.H., Frazier M.E., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   "The Diploid Genome Sequence of an Individual Human";
RL   PLoS Biol. 5(10):E254-E254(2007).
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RN   [2]
RP   1-8320
RA   Levy S., Sutton G., Ng P., Feuk L., Halpern A.L., Walenz B., Axelrod N.,
RA   Huang J., Kirkness E.F., Denisov G., Lin Y., MacDonald J.R., Wing A.,
RA   Pang C., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D., Beeson K.Y., McIntosh T.C., Remington K., Gill J.,
RA   Borman J., Johnson J., Resnick A., Rogers Y.-H., Frazier M., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   ;
RL   Submitted (18-MAY-2007) to the INSDC.
RL   J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850,
RL   USA
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DR   MD5; 44a0b65b7ba6bcff37eca202e7d966ea.
DR   ENA; ABBA010000000; SET.
DR   ENA; ABBA000000000; SET.
DR   ENA-CON; KI270366.
DR   ENA-CON; GJ211905.
DR   ENA-CON; GJ212076.
DR   ENA-CON; DS487738.
DR   BioSample; SAMN02981236.
DR   Ensembl-Scaffolds; ABBA01141747.1:1-8320; homo_sapiens.
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CC   DNA Donor Name: J. Craig Venter | Date of Birth: October 14, 1946 |
CC   Sex: Male | Ethnicity: Caucasian | Descent: European - England
CC   This WGS project represents a composite haploid version of the
CC   genome where the highest scoring allele contained is represented in
CC   the consensus sequence.  The number of contigs may differ from
CC   those in the PLoS Biol. paper (PloS Biology 2007 5: e254) because
CC   some short sequences were found to be foreign and thus were
CC   suppressed. Scaffolds DS486015-DS490530 represent the 4528
CC   scaffolds that are discussed in the paper.  There are fewer than
CC   listed in the paper because 12 of the original were determined to
CC   be foreign, so were omitted here.  Scaffolds DS490531-DS490620 are
CC   the remaining multi-component scaffolds, not in the set of 4528.
CC   The chromosomes are records CM000462-CM000485, assembled from the
CC   scaffolds.
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FH   Key             Location/Qualifiers
FH
FT   source          1..8320
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 8320 BP; 2703 A; 1627 C; 1380 G; 2610 T; 0 other;
     cgaaagcctc aagcggtcaa gacatccact tgcagatcct acaaaaagag tgtttcggaa        60
     ctgctctatc aaaagaaatg ttcaaccctg tgagttgaat gcaaaagtca caaaacgttt       120
     ctcagaatgc ttcggtatag tttttatatg tatatgtttc cttttccatt atagccctca       180
     atatgctaaa aaggtacact tgtagattct aaaaaaagag tgtttcaaaa ctgctctatc       240
     caaagaaagg ttaaactctg tgaattgaat gcacacatca caaagtagtt tctgaaaatg       300
     cttctgtcta gtttttatat gaagatattt ccttttctat cataggcctg aaagcactcc       360
     aaatatccac ctgcagattc tacaaaaaga gtgtttcaaa actgctctac caaaaggaag       420
     gttcaactct gtgggttgaa tgcacacatc acaaagaagt ttctgagaat gcttctgtct       480
     agtttttatg ttaagatatt cctgtttcca acgaaggctt caaagcactc caaatatcca       540
     gttgcagatt ctactaaaag agtgtttcaa aacgtctctc tcaaaaggaa ggttcaactc       600
     tgtgagttga atgcccacat cacaaagaag tttctgagaa tgtttctgtc tagtttttat       660
     gtgaagatat tcccgtttcc aacgaaagct tcaaagcact ctgaatatcc acttgcagac       720
     tctacaaaag agtgtttcca aactgctcta ccaaaaggaa agttcaactc tgtgagttga       780
     atggacacat cacaaagtag tttgtgagaa tgcgtctgtc tagcttttat gtgaagatat       840
     tcccgtttcc aacgaaggct tcaaaggact caaaatatag acttccagat tctacaaaaa       900
     gagtgtgtca aaactgctct accgaaagaa atgttcaaaa ctgtgagatg aatgcacaca       960
     tcagtaagta gtttctgaga atgcttcagt ctagttttta tgggaaaata tttccgtttc      1020
     caaagaaggc ctgaaagcag tccaaatatc cacttgcaga ttctacaaaa agattgtttc      1080
     aaaactgttc tatgaaaaga aatgttcaac tctgtgagtt gaatgagaac atcacaaaga      1140
     agtttctgag aatgcttctg tctagttttt atgtgaagat atttcctttt acaccacagc      1200
     cctccaagtg ctccaaatgt ccacttgcag attctacaaa aaaaaagtgt ttcaaaactg      1260
     ctctatcaaa aggaaggttc aactctctga gttggatgca ctcatcccaa agaagcttct      1320
     gagaatgctt ctgtctagtt tttatgtgaa gatattcccg tttccaaaga aggcttcaat      1380
     ctctccaaat atccactagc agattctaca aaaagagtgt ttcaaaactg ctccatcaaa      1440
     agcaaggttc aactctgtga gtagaatgca aacatcacaa agaagtttct gagaatgatt      1500
     ctgtctagtt tttatgtaaa gatattccct tttccaatga agacttcaaa gcactccaaa      1560
     aatccacttg cagatcctag aaaaagagaa tttcaatact gctctatcaa aaggaatgtt      1620
     caactctgtg agttgaatga gcacatcaga aagaagtttc tgagaatggt tcgatctagt      1680
     tttatgtgta gataaagtcg tttccaacga agttctcaaa ggggtacaat tatgcacttg      1740
     cagtttctac aaaaagagtg tttcaaaact gctctatgaa aagaaaggct caactctctg      1800
     agttgaatgc agaaatcaca gacatgtttc tgagaatact tctgtctaat ttttatgtaa      1860
     agatatatcc ttttccacca tagacctcaa agtgctccaa atgtccactt gcagatatta      1920
     caaaaagagt tttttgaaac tactctatca aaagaaaatt taaacacttt aggttgaatg      1980
     cagacgtcac aaagtagttt ctaagaatgc ttctttctaa tttttatatg aagacatttc      2040
     cttttctacc ataggcctca aagcattccc aaaatccact tgcagattac agaaaaggaa      2100
     tgtttcaaaa ccactctatc aaaaggaggg ttcaactccg tgagctgaat acacacattc      2160
     caaagaagtt tcttagaatg cttctgtcta gtttttatgt gaagatattc cagtttccaa      2220
     cgaaggctta aagcactcct aatatccact tgtggattct acaaaaagag tgtttcaaaa      2280
     ctgctctatc aaaagaaagg ttcaactctg tgagttgaat gcacacatca caaagtagtt      2340
     tctgagaatg cgtctgtcaa gtttttatgt gaagatactc ccattttcaa tgaaggcatc      2400
     aaatcagtcc aaatatccac ctgcagattc tacaaaaaga gtttttcaaa actgctctaa      2460
     caaaagaaag gttcaactct gtgagttgaa tgcacacatc aaaagaagtt tgtgagaatg      2520
     cttctgtcta gtttttatgt gaagatattt ccttttccac catagccttc aaagtgcttc      2580
     aaacatccac ttgcagattc tacaaaaaga gtgtttcaaa acttctctaa gaaaagaaag      2640
     gttaatctct gtgagttgaa tgcacacttc acaaagtagt ttctgagaat gcttctttct      2700
     agtttttata tgaatatatt tccttttcta ccataagcct caaagccctc aaactatcca      2760
     cttgcagatt ctgcaaaaag agtgtttcaa aactgctcta tcaaaaggaa ggctcaactc      2820
     tgtgagttga atgcacacat cacaaagtag tttctgagaa tgcgtctgtc aagtttttat      2880
     gtgaagatac tcccatttcc aatgaaggcc tcaaataagt ccaaatatcc acctgcagat      2940
     tgtacaaaaa gagtttttca aaactgctct aacaaaagaa aggttcaact ctgtgagttg      3000
     aatgcacaca tcaaaagaag tttgtgagaa tgcttctgtc tagtttttat gtgaagatat      3060
     ttccttttcc accatagccc tcaaagtgct tcaaatatcc acttgcagat tctacaaaaa      3120
     gagtatttca aaacttctct aaggaaagaa aggttaacct ctgtgagttg aatgcacact      3180
     tcacaatgta gtttctgaga atgcttcttt ctagttttta tatgaatata tttccttttc      3240
     taccgtaagc ctcaaagccc tcaaaatatc cacttgcaga ttctgcaaaa agtgtttcaa      3300
     aactgcttta ttaaaaggaa ggttcaaatc tgtgagctga atgcactcat cacaataagt      3360
     ttctgagaat gcttctgtct agtttttatg tgaaggaatt tccttttcca ccactgccct      3420
     cagagtgctc caaatgtcca catgcagaca ctacaaaaag agtgtttcaa aacttctcta      3480
     tcaaaagaaa ggttaaactc tgtgaattga atgtacacat cacaaagcag tttctgagaa      3540
     tgcttctttc tagtttttat gtgaagatat ttccttttct ccatagccct caaagggttc      3600
     caaatatcca cttccagatt ctacaaaaag agtgtttcaa aactgctcaa tcaaaagagg      3660
     ggttcacctc tcgaagttga atggacgcat cacaaatgtt tctgtgaatg cttctgtcta      3720
     gtttttatgt gaagatatta ctgtttccat tgaaggcttc aaagcactct aactatccac      3780
     ttgtagattc tacaaaaaca gggtttcaaa tctgctctat caaaaggaag gttcaaatct      3840
     gtgtgttgaa tgcacacatc acaaagaagt ttctgagaat gtttctgtct agtttttatc      3900
     tgaggatatt cccgtttcca acggaggcct gaaagcagtc caaaaatcaa cttgcagatt      3960
     ctacaaaaag agtgtttcaa aactgctcca tgaaaagaaa tgttcaactc tgttagttaa      4020
     atgcaaacat cacaaagacg tttctgagaa tgcttcattc tagtttttat gtgaatttat      4080
     ttccttttcc aacttagcct tcaaagtgct ccaaatatcc acttgaagat tctacaaaaa      4140
     gagtgttgta agactgctat atcaaaagaa acgttaaact ctgtgagttg agtgcacaca      4200
     tcccatagta gtttctgaga atgcttcttt ctagttttta tatgaagata tttccttttc      4260
     taccataggc ctcaaagggc tgcaaatacc cacttgcaga ttctaaaaaa gagtgtttca      4320
     aaaccgagct atcaaagtag tgttcacttc tatgagttga atgcattcat cacaaagaag      4380
     tttctgagaa tgcttctatc tagtttttct gtgaagatat ttccttttcc accatagccc      4440
     tcaatgtgct ccaaaagtcc actttcagaa tctacaaaaa tattgtttca aaactgctct      4500
     atcaaaagaa aagttaaact ccgtgagata aatgcacaca tcacaaagta gtttctgaga      4560
     atgcttctgt ctagttttta tatgtagata tttccttttc taccataggc ctctaagcac      4620
     cccaattatc caattgcgga ttctgcaaaa agagtgtttc aaaattgctc tctcaaaaga      4680
     aagtttaact ctgtgagttg taagcacaca tcaaaaagta gtttctgaga ctgcttcttt      4740
     ctagttttta tatgaagata tttccttttc tactgtattc ctcaaagcgc tccaaatatc      4800
     caattgcaga ttctacaaaa agagtgtttc aaaactgctc tatcaaaagg aaagttcaac      4860
     tcagtgagtt gaatgcacac atcacaaaga agtttctgag aatgcttctg tctagttttt      4920
     aggtaaagat attcccgttt ccaacgatgg cctcaaagca gtccaaatat ccacttgcaa      4980
     attctacaaa aagagtgttt caaaactgct caatgaaaag gatggttcaa ctccgtgggt      5040
     tgaatgcaaa caacacaaag aagtttcgga gaatgcttct gtctagtttt tatgtgaaga      5100
     tctttccttt tccacgatag ccctcacgtg ctccaaatgt ccacatgcag atgctacaaa      5160
     agagagtttc aacactgctc tgtcaaaaga aacattcaac tctgtgagtc gaatgcacac      5220
     atcacaacta gtttctgaga atgcttcttt ctagttttta tatcaagata tttccttttg      5280
     tacaataggc ctcaaagggc tccaaatatg cactttcaga tcctacaaaa acagtgtttc      5340
     aaaacttctg tatcaaaacg agtgttcaac tctgtgagtt gaatgcacac ataacaaagt      5400
     actttctgag aatgcttctg tctcgttttt atgtgaagat attcccgttt ccaacaaagg      5460
     cctcaaagca gtccaaatat ccacttgcag attcttcaaa aagtgtgttt caaaactgct      5520
     ctatcaaaag aaaggttgaa cactgtgagt tgaatgcaaa aatcacaaag aagtttctga      5580
     gaatgcctct gtcttgtttt tatgtgatga tacttctttt ttcaccatag ccctcaaagt      5640
     gctccatatg tccacttgca gattccacaa agagagtgtt tcaaaacttc tctaccaaaa      5700
     gaaatgttca actctgtgag ttgaatgcac ccatcacaaa gaagtttctg agaatgcttc      5760
     tgtctagttt ttatgtgaag atatttcctt ttccaccata taccttaaac ttctacaaat      5820
     gtccacttgc agattctaca aaaagagtgt ttcaaaagtg ctctatcaaa agaaagttta      5880
     actctgtgag ttgaatgcaa acatcagaaa gaagtttctg agaatgcttc tgtctagaat      5940
     ttatgtgaag atatttcttt ttccaccata gcccacaaag tgttccaaat gtacagtttc      6000
     agattctaca aaaagagtgt ttctaactgc tctgtcaaaa gaaaggttaa actctgtgag      6060
     atgaatgcac acatcacaaa ttagtttcta agaatgcttc tttctagctt ttatatgaag      6120
     atatttcctt ttttaccata ggcctcaaag tgctccaaat attcacttgc agattctaca      6180
     aaaagagggt ttcaatacag ctctatcaaa aggaggttta aactctgtga gttgaacgca      6240
     cacatcacaa tgaagtttct aataatgcat ctgtctagtt tttatgtgaa gatattcccg      6300
     tttccaacga aggcttcaaa ttagtccaat tatccacttg cagattctat aaaaagagtg      6360
     tttcaaaact gctcaataaa aaggaatgtc taaatctgtg agatgaatgc acacatcgca      6420
     aggaagtttc tgagaatgct tctgtctagt ttttatgtga agatattccg gtttccaatg      6480
     aaggcctgaa agcactccaa atatctactt gcagattcta caaaaagagt gtatcaaaac      6540
     ttctctatga aaaggaaggt tcaactctgt gagttaaatg cacacattac aagaagtttc      6600
     tgagaatgct tctgtctggt ttttatgtga agatactttc ttttccacca aagacctcaa      6660
     agagcacgac atgtccactt gcagattcta caaaaagagt gtttcaaaac tgctctatca      6720
     ataggaaggt tcaactctgt gagctgaatg cacacatcac aaagaacttt ctgagaatgc      6780
     atctttctag tttttatgtg aagatatacc cgtttccaac gaagacttca aattactcca      6840
     attatccact tgcagattgt acaacaagtg tgttcaaaac tgctctatca ataggaatgt      6900
     tcaactctgt gagttgaatg tccacatcac aaagaagttt ctgagaatgc ttctgtctag      6960
     ttttcacgtg aagatattcc catttccaac gaaggcctca aagcagtcca aatgcccaat      7020
     gcagatgcta caaaaagagt gtttcaaaac tgctctatca aaagaaaggt gaattatgtg      7080
     aattgtgagc acacatcaca aaatagtttc tgagaatgca tctgtctagt ttttatgtga      7140
     agatataccc gtttccaacg aagacttcaa attactccaa ttatccactt gcagattgta      7200
     caagtgtgtt caaaactgct ctatcaatag gaatgttcaa ctctgtgagt tgaatgtcca      7260
     catcacaaag aagtttctga gaatgcttct gtctagtttt caagtgaaga tattcccatt      7320
     tccaacgaag gcctcaaagc agtccaaatg tccaatgcag attctacaaa gagtgtctca      7380
     aaactgctct atcaaaagaa aggtgaatta tgtgaattgt gagcacacat cacaaagtag      7440
     tttctgagaa tgcttctgtc tagtttttat atgtagatat ttccttttct accataggcc      7500
     tctaagcacc ccaattatcc aattgcggat tctgcaaaaa gagtgtttca aaattgctct      7560
     atcaaaagaa agatttaact ctgtgtgttg aatgcacaca tcacaaataa gtttctgaga      7620
     atgcttctgt ctagattgta tgtgaagata ttcccgttta caaggaaggc ctcaaagcag      7680
     tccaaatatc cacttgcaga ttctacaaaa agagtgtttc aaatctgctc tatgaaaaga      7740
     aacgttcaac tctgtgagtt gaatgcaaat ctcagaaaga agtttctgag aatgcttatg      7800
     tctagttttt atgtgaaggt atttcctttt ccaccatagc cctcaaagtt ctccaaatat      7860
     ctacttgcat attctacaaa aagagtgtta caaaactgct gtatctaaag aaaggttaaa      7920
     ctctgtgagg tgaatgcaca catcacgaag tagtttccga gaatgcttct ttctagtttt      7980
     cctatgaaga tatttccttt tctaccatag ggctcaaaag tttccaaata tccacttgca      8040
     gattctacaa aaagagtgtt tcaaaactgc tctatcaaaa gaaattttaa attctttgag      8100
     ttgaatgcac acatccaaaa gtagtttctg agaatgcatc cgtctagttt ttttttttct      8160
     ccccagaaaa tgggttgttt ttttttattt taattttttt aattctttta tttttttatt      8220
     atactttaaa ttttaagggt acatgtgcac attgtgcagg gtagttacat atgtatacat      8280
     gtggcatgct ggggcgctgc acccctaact cgtcatctag                            8320
//