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EBI Dbfetch

ID   ABBA01118748; SV 1; linear; genomic DNA; WGS; HUM; 1361 BP.
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AC   ABBA01118748;
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PR   Project:PRJNA19621;
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DT   05-JUN-2007 (Rel. 92, Created)
DT   23-AUG-2014 (Rel. 121, Last updated, Version 4)
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DE   Homo sapiens CTG_1103276795888, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-1361
RX   PUBMED; 17803354.
RA   Levy S., Sutton G., Ng P.C., Feuk L., Halpern A.L., Walenz B.P.,
RA   Axelrod N., Huang J., Kirkness E.F., Denisov G., Lin Y., Macdonald J.R.,
RA   Pang A.W., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D.A., Beeson K.Y., McIntosh T.C., Remington K.A.,
RA   Abril J.F., Gill J., Borman J., Rogers Y.H., Frazier M.E., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   "The Diploid Genome Sequence of an Individual Human";
RL   PLoS Biol. 5(10):E254-E254(2007).
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RN   [2]
RP   1-1361
RA   Levy S., Sutton G., Ng P., Feuk L., Halpern A.L., Walenz B., Axelrod N.,
RA   Huang J., Kirkness E.F., Denisov G., Lin Y., MacDonald J.R., Wing A.,
RA   Pang C., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D., Beeson K.Y., McIntosh T.C., Remington K., Gill J.,
RA   Borman J., Johnson J., Resnick A., Rogers Y.-H., Frazier M., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   ;
RL   Submitted (18-MAY-2007) to the INSDC.
RL   J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850,
RL   USA
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DR   MD5; ee8962dbef9396884f649e566b78bf06.
DR   ENA; ABBA010000000; SET.
DR   ENA; ABBA000000000; SET.
DR   ENA-CON; GJ211951.
DR   ENA-CON; KI270429.
DR   BioSample; SAMN02981236.
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CC   DNA Donor Name: J. Craig Venter | Date of Birth: October 14, 1946 |
CC   Sex: Male | Ethnicity: Caucasian | Descent: European - England
CC   This WGS project represents a composite haploid version of the
CC   genome where the highest scoring allele contained is represented in
CC   the consensus sequence.  The number of contigs may differ from
CC   those in the PLoS Biol. paper (PloS Biology 2007 5: e254) because
CC   some short sequences were found to be foreign and thus were
CC   suppressed. Scaffolds DS486015-DS490530 represent the 4528
CC   scaffolds that are discussed in the paper.  There are fewer than
CC   listed in the paper because 12 of the original were determined to
CC   be foreign, so were omitted here.  Scaffolds DS490531-DS490620 are
CC   the remaining multi-component scaffolds, not in the set of 4528.
CC   The chromosomes are records CM000462-CM000485, assembled from the
CC   scaffolds.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1361
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 1361 BP; 384 A; 229 C; 273 G; 475 T; 0 other;
     cgttcactca cagattttaa cctttctttt catagagcag tctggaaaca ctctgtttgt        60
     aaagtctgca agaggatatt tggacctctt tgagcccttc tttggaaacg ggatttcttc       120
     atatactgct agacagaata aatcttaata acttccttgg gttgtgtgta ttcaactcat       180
     agagttgaaa cttcctttag agagagcaga tgtgcaatac tcttttttgt gatatttgca       240
     cgtggagatt tctagcgctt ttaggccaaa aatagaaaag gaaatacctt tgtacaaaaa       300
     ctatacagaa tcattctgag aatctacttt gtgatgtgtg cattcaattc acagagttta       360
     acctttcctt tgattgtgca gtttggaaac cctctctttg taaattctgc aagtggatat       420
     atggacctct ttttggcctt cgttggaaaa ggtatttctt cattgaatgt tagacagaag       480
     aattctcagt accttatatg tgttgtgtgc tttcaactca cagtgttgaa ccttccttta       540
     cataaagcag atttgaaaca ttctttttgt ggatttccca ggtggagatt tcaatcgcct       600
     cgaggccaat ggtagaaaag gtaatatctt catataaaaa caagacaaaa tcgttctctg       660
     aaactacttt gtgatgtgtg cgttcaactc acagagttta atctttcttt tcatagagca       720
     gtttggaaac actctgtttg taatgtctgc aagtggatat tttgatctat ttgaggcctt       780
     cgttggaaac gggatttttt catgtaatgc tagaaagaag aatcctcagt aacttctttg       840
     tgttgcatgt attcaactca cagaggtgaa ccatccttta gacggagaag atgtgaaaca       900
     ctctttttgt taaatttgca ggtggagatt tcaagcgatt tgaggccaac ggtaggaaag       960
     gaattatctt cgtataaaag gtagacagaa tcattctcag aaactatttt gtgatgtgtg      1020
     cattcaactc acagagttta aattttcttt tcatagagca gttcggaaat actctgtttg      1080
     taaggtgtgc aagtggatat ttggacctct ttgagccctt ctttggcaac gggatttctt      1140
     cttatattgc ttgacagaag aattctcagt aactttttgt gttgtgtgta ttccactcac      1200
     agacttgaac cttcctttag agagaggaga tttgacacac tctttttgtg gaatttccag      1260
     atggaatttt cagttgcttt gaggccaatg acagaaaagg aaatattttc gtataaaaac      1320
     tagacagaat ctttctgaga aactactttg tgatgtgtgc a                          1361
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