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EBI Dbfetch

ID   ABBA01101603; SV 1; linear; genomic DNA; WGS; HUM; 1300 BP.
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AC   ABBA01101603;
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PR   Project:PRJNA19621;
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DT   05-JUN-2007 (Rel. 92, Created)
DT   23-AUG-2014 (Rel. 121, Last updated, Version 4)
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DE   Homo sapiens CTG_1103276935204, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-1300
RX   PUBMED; 17803354.
RA   Levy S., Sutton G., Ng P.C., Feuk L., Halpern A.L., Walenz B.P.,
RA   Axelrod N., Huang J., Kirkness E.F., Denisov G., Lin Y., Macdonald J.R.,
RA   Pang A.W., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D.A., Beeson K.Y., McIntosh T.C., Remington K.A.,
RA   Abril J.F., Gill J., Borman J., Rogers Y.H., Frazier M.E., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   "The Diploid Genome Sequence of an Individual Human";
RL   PLoS Biol. 5(10):E254-E254(2007).
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RN   [2]
RP   1-1300
RA   Levy S., Sutton G., Ng P., Feuk L., Halpern A.L., Walenz B., Axelrod N.,
RA   Huang J., Kirkness E.F., Denisov G., Lin Y., MacDonald J.R., Wing A.,
RA   Pang C., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D., Beeson K.Y., McIntosh T.C., Remington K., Gill J.,
RA   Borman J., Johnson J., Resnick A., Rogers Y.-H., Frazier M., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   ;
RL   Submitted (18-MAY-2007) to the INSDC.
RL   J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850,
RL   USA
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DR   MD5; 1cbaaafbbf016906a5bf5886f5a0ecb7.
DR   ENA; ABBA010000000; SET.
DR   ENA; ABBA000000000; SET.
DR   ENA-CON; KI270516.
DR   ENA-CON; GJ212038.
DR   BioSample; SAMN02981236.
DR   Ensembl-Scaffolds; ABBA01101603.1:1-1300; homo_sapiens.
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CC   DNA Donor Name: J. Craig Venter | Date of Birth: October 14, 1946 |
CC   Sex: Male | Ethnicity: Caucasian | Descent: European - England
CC   This WGS project represents a composite haploid version of the
CC   genome where the highest scoring allele contained is represented in
CC   the consensus sequence.  The number of contigs may differ from
CC   those in the PLoS Biol. paper (PloS Biology 2007 5: e254) because
CC   some short sequences were found to be foreign and thus were
CC   suppressed. Scaffolds DS486015-DS490530 represent the 4528
CC   scaffolds that are discussed in the paper.  There are fewer than
CC   listed in the paper because 12 of the original were determined to
CC   be foreign, so were omitted here.  Scaffolds DS490531-DS490620 are
CC   the remaining multi-component scaffolds, not in the set of 4528.
CC   The chromosomes are records CM000462-CM000485, assembled from the
CC   scaffolds.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1300
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 1300 BP; 409 A; 216 C; 256 G; 419 T; 0 other;
     aaataaaaaa tacacggaag cattctgaga aacttcattg ttttgtgtgc attcaactca        60
     cagagttgaa cctatctatt gattgagcag ttttgaaaac ctctttttta gaaactgcaa       120
     gtggatattt ggagcccttt gcgccctgtg gtggaaaagg aaatatcttc aaataaaaac       180
     tacacagaag cattcaaaga aacttccttg tgaagtgtgc attcatctgt gatgtgtgct       240
     ttcacttcac agaattgaac ctatcttttg attgagcagt tttgaaactc tctttttgtg       300
     gaatctgcaa gtggatattt ggaacccttt gcagcctatg gtggaaaagg aaatattttc       360
     aaataaataa tacacagaag cattcagaga aacttcttcg tggtgagtgc cttcatcaca       420
     gagagttgaa cctttccttt gattgagcag ttttgaaaca ctctttttgc aggatctgca       480
     ggtggatatt ttagtgtttt gaggccaaat gtggaaaatc aaatatcttc acataaaaac       540
     tacacagaag cattctggga aactacttag ggaggtgtgc attcaactca cagagttgaa       600
     cctatctttt cattgagcag cattgagtct ctctttctgt agaatctgca agtggatatt       660
     tggagagatt tgaggcctat tgtggaaaag gaaatatctt cacataaaaa ctacacaaaa       720
     gcattctgag aaaattcttt gtgaggtatg cattgaactc acataattga acctatcttt       780
     tgattgagcc gtttagatta tctctttttg tagaatctgc aagtggatat ttggagccct       840
     tagcagccta tggtggaaaa ggaaatatca tcaaataaaa actacacaga agcattctga       900
     gaaacatctt tatgatgttt ccattcatct cacagggtgg aacctgtctt ttgattgagt       960
     agtttagaat ctctcttttt gtagaatctg caagtggtta tttgagccct atttcaccca      1020
     atagtggaaa agcaaatatc ttcaaataaa aactacacag aatcattcag agaaactact      1080
     ttgtgatgag tgcattcatc acacagagtt gaacgtttgt tttgattgat cagttttgag      1140
     acattctttc cgtagaatct gaaagtgaat atttggaggg cttcgagtcc tattttggag      1200
     aaggagatat cgtcatataa aaactacaca gaagcattct gagaaacttc cttgtgaggt      1260
     gtgcattgaa ctcaaaaagt tgaatctatc ttttgattca                            1300
//


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