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EBI Dbfetch

ID   ABBA01101115; SV 1; linear; genomic DNA; WGS; HUM; 1121 BP.
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AC   ABBA01101115;
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PR   Project:PRJNA19621;
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DT   05-JUN-2007 (Rel. 92, Created)
DT   23-AUG-2014 (Rel. 121, Last updated, Version 4)
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DE   Homo sapiens CTG_1103276932142, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-1121
RX   PUBMED; 17803354.
RA   Levy S., Sutton G., Ng P.C., Feuk L., Halpern A.L., Walenz B.P.,
RA   Axelrod N., Huang J., Kirkness E.F., Denisov G., Lin Y., Macdonald J.R.,
RA   Pang A.W., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D.A., Beeson K.Y., McIntosh T.C., Remington K.A.,
RA   Abril J.F., Gill J., Borman J., Rogers Y.H., Frazier M.E., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   "The Diploid Genome Sequence of an Individual Human";
RL   PLoS Biol. 5(10):E254-E254(2007).
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RN   [2]
RP   1-1121
RA   Levy S., Sutton G., Ng P., Feuk L., Halpern A.L., Walenz B., Axelrod N.,
RA   Huang J., Kirkness E.F., Denisov G., Lin Y., MacDonald J.R., Wing A.,
RA   Pang C., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D., Beeson K.Y., McIntosh T.C., Remington K., Gill J.,
RA   Borman J., Johnson J., Resnick A., Rogers Y.-H., Frazier M., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   ;
RL   Submitted (18-MAY-2007) to the INSDC.
RL   J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850,
RL   USA
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DR   MD5; 16fc8d71a2662a6cfec7bdeec3d810c6.
DR   ENA; ABBA010000000; SET.
DR   ENA; ABBA000000000; SET.
DR   ENA-CON; KI270337.
DR   ENA-CON; GJ211876.
DR   BioSample; SAMN02981236.
DR   Ensembl-Scaffolds; ABBA01101115.1:1-1121; homo_sapiens.
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CC   DNA Donor Name: J. Craig Venter | Date of Birth: October 14, 1946 |
CC   Sex: Male | Ethnicity: Caucasian | Descent: European - England
CC   This WGS project represents a composite haploid version of the
CC   genome where the highest scoring allele contained is represented in
CC   the consensus sequence.  The number of contigs may differ from
CC   those in the PLoS Biol. paper (PloS Biology 2007 5: e254) because
CC   some short sequences were found to be foreign and thus were
CC   suppressed. Scaffolds DS486015-DS490530 represent the 4528
CC   scaffolds that are discussed in the paper.  There are fewer than
CC   listed in the paper because 12 of the original were determined to
CC   be foreign, so were omitted here.  Scaffolds DS490531-DS490620 are
CC   the remaining multi-component scaffolds, not in the set of 4528.
CC   The chromosomes are records CM000462-CM000485, assembled from the
CC   scaffolds.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1121
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 1121 BP; 496 A; 175 C; 111 G; 339 T; 0 other;
     ccaaagtatg tattataagc tgtagataaa atatcaaagt acccaaacta tatattatat        60
     actgtacata aaatatgaaa gtacccaaag tatgtattat atactgtaca tagaatatca       120
     aagtacccaa agtgtgtatt atatactgta cataaaatat caaagtaccc aaagtatgca       180
     ttacatactg tacataaaac atgaaagtac ccaaagtatg cattatatac tgtacataaa       240
     atatcaaagt acccaaagta tgtattatat actgtacata aaatatcaaa gtacccaaag       300
     tatgtatagt atactgtaca taaaatatca aagtgctcaa agtatgtatt atatactgta       360
     cataaaatat gaaagtatcc aaacctttat agtaaagtgt acataaaata tccatgtact       420
     ccaactatat actatacata aaatatcaaa ctaccaaaac tatatattct atactggaca       480
     taaaatatca aagtactcaa agtatatatt gtatactgta cataaaatat caaagtaccc       540
     aaagcatgta ttatataccg tacataaaat atcaaagtac ccaaagtatg tattatatac       600
     tgtaattaaa atatcacagt acccaaagta tgtattatct actgtacata aaataccaat       660
     gtactcaatg tatgtattat acactgtaca taaaatatca aagtacacaa agtatgtatt       720
     atgtactgta cacgaaatat caaagtaccc aaagtatgta ttatatactg tacataaaat       780
     atcaaagtac ccaaagtatg tattatatac tgtacataaa atatcaaagt acccaaagta       840
     tgtattatgt actgtacata aaatatcaaa gtacccaaac tatatattat atcctgtaca       900
     taaaatatca aagtacccaa agtatgcatt atatactgta cataaaatgt caaactaccc       960
     taagtatgta ttatatactg tacataatat atcaaagtac ccaaaatatg tattatgtac      1020
     cgtacataaa atatcaaagt acccaaagta tgtattatat actgtacata caatatcaaa      1080
     gtacccaaag tatgtattat atactgcacc taaaataaaa g                          1121
//


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