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EBI Dbfetch

ID   ABBA01037334; SV 1; linear; genomic DNA; WGS; HUM; 3130 BP.
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AC   ABBA01037334;
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PR   Project:PRJNA19621;
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DT   05-JUN-2007 (Rel. 92, Created)
DT   23-AUG-2014 (Rel. 121, Last updated, Version 4)
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DE   Homo sapiens CTG_1103276983557, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-3130
RX   PUBMED; 17803354.
RA   Levy S., Sutton G., Ng P.C., Feuk L., Halpern A.L., Walenz B.P.,
RA   Axelrod N., Huang J., Kirkness E.F., Denisov G., Lin Y., Macdonald J.R.,
RA   Pang A.W., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D.A., Beeson K.Y., McIntosh T.C., Remington K.A.,
RA   Abril J.F., Gill J., Borman J., Rogers Y.H., Frazier M.E., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   "The Diploid Genome Sequence of an Individual Human";
RL   PLoS Biol. 5(10):E254-E254(2007).
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RN   [2]
RP   1-3130
RA   Levy S., Sutton G., Ng P., Feuk L., Halpern A.L., Walenz B., Axelrod N.,
RA   Huang J., Kirkness E.F., Denisov G., Lin Y., MacDonald J.R., Wing A.,
RA   Pang C., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D., Beeson K.Y., McIntosh T.C., Remington K., Gill J.,
RA   Borman J., Johnson J., Resnick A., Rogers Y.-H., Frazier M., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   ;
RL   Submitted (18-MAY-2007) to the INSDC.
RL   J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850,
RL   USA
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DR   MD5; cb38f5f438c2d8c9b8db6a20c41f80c7.
DR   ENA; ABBA010000000; SET.
DR   ENA; ABBA000000000; SET.
DR   ENA-CON; KI270442.
DR   ENA-CON; DS486450.
DR   ENA-CON; GJ212115.
DR   ENA-CON; GJ212001.
DR   ENA-CON; GJ212127.
DR   ENA-CON; GJ212164.
DR   ENA-CON; GJ211964.
DR   BioSample; SAMN02981236.
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CC   DNA Donor Name: J. Craig Venter | Date of Birth: October 14, 1946 |
CC   Sex: Male | Ethnicity: Caucasian | Descent: European - England
CC   This WGS project represents a composite haploid version of the
CC   genome where the highest scoring allele contained is represented in
CC   the consensus sequence.  The number of contigs may differ from
CC   those in the PLoS Biol. paper (PloS Biology 2007 5: e254) because
CC   some short sequences were found to be foreign and thus were
CC   suppressed. Scaffolds DS486015-DS490530 represent the 4528
CC   scaffolds that are discussed in the paper.  There are fewer than
CC   listed in the paper because 12 of the original were determined to
CC   be foreign, so were omitted here.  Scaffolds DS490531-DS490620 are
CC   the remaining multi-component scaffolds, not in the set of 4528.
CC   The chromosomes are records CM000462-CM000485, assembled from the
CC   scaffolds.
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FH   Key             Location/Qualifiers
FH
FT   source          1..3130
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 3130 BP; 1187 A; 195 C; 1121 G; 627 T; 0 other;
     aatggaaggg aatggaatgg aatggaatgg aatggaatgg aagggaatgg aatggaatgg        60
     aagggattgg aatggaatgg aatggaagtg aatggaatgg aatggagtgc aatggaatgg       120
     aatggaatgg aatggaatgc aaagcaatgg aatagaatgg aatggaatgg aagggaaggg       180
     aatagaatgg aatagaatgg aagggaatgg aacggaatgg aatggaatgg aatggaatgg       240
     aatggaatgg aatgcaatgg aatggaaaga aatggaatcg aatggaatgg gatcgaatgg       300
     aatggaatca aatggaatgg aatcaaacgg aatgaaatca aatggaaaca aatggattcg       360
     aatggaatgc agtgaagcgg agtggaatag agtggaatgg attggaatgt agtgcggaga       420
     aatggaattg ataggaatgg agtggagtgg agcagaatgg aggagaatat tatgcaatat       480
     gaatgaatgg aattgaacag agtggagtgc agtggagtgg agtggagtgg attgtaatgg       540
     aatgcactgc aatgtgatgc aatggaatgg agtggattgg aatcaaatgc agtggaatgg       600
     aatggaatga attggaatgg aatggaatgg agtggaatgg aatggagtgt aatggaatgg       660
     aatggaatgt actcgagtgg attgcacttg aatggagtgg acttgaatct gatggaatgg       720
     aatggaatgg aaagatatcg aattgaatag aatggaatgc aagggaatgg aataaaatgg       780
     tatggtatgg aatggaatgg actcaaatgt aattgactgg gatggaatgg actcgtatgg       840
     aacggaatcg aatggagcgg actcgaaagg tattgactcg aatgcaatgg aatcaattgg       900
     aatagaatcg aattgaatgc aatcaaatgg aagggaattg aaaggaaagt aatagaaagg       960
     aatggactgg aacgcaatgg actggaaatg aatggaatcg aatggaatgg actgaaatgg      1020
     aaaggattcg aatggaatga aaaagaacgg aatggaatgg aatggaatgg aatggaatgg      1080
     aatggaacgg aacagaatgg aatggaatgg aatggaaccg aatggaatgg aaagaaatga      1140
     aatgcaatgg aatggattgg actccaatgt aatgaactcg aatggaaaac attcaaatgg      1200
     aatggaatca aatggactgg aattgaatgg aatgggattg aatggagtgg gatcgaatgg      1260
     agtggaatcg aagggagtgg aatggaatgg aatggaatgg aataaaatgg aatggaatgg      1320
     aatggagtgg aatacaatgg actacaatgg aaaggactca aaaggaatgg aaacaatagg      1380
     aattgaattg aatgaatgga atcaaatgga atgggatcga atggaatgga accgaatgga      1440
     atggagtgga gtgcagtgga atggagcaga atggaatgga atgagaagga aaggatttga      1500
     atggagggga gtggaacgga gaggagtaga gtgaagcgga atggaatgga gtggagtgga      1560
     taggaatgta gtggagtgaa gtggaatgga gtggagtggt atggagtgga atggaatgga      1620
     agaggaaaga gtggaatgga acggagtgga gtggattgga gtggatttga atggaatgca      1680
     atggaatgga atggaatgga gaggaatgga ctggaatgta gtggaataca atgagtatgg      1740
     caggaatgga agggagtgga gtggagtgta atggaatgga atggactcga tcacaatgga      1800
     cttgaatgga atggactcga atgtaatgga atggaatgca gtggaaagat atcgaatggg      1860
     atggaatgga atggaaagga atggaatgga gtggagtgga atggaatgga atggaatgga      1920
     ctcgatcaca atggacttga atggaatgga ctcgaatgta atggaatgga atgcagtgga      1980
     aagatatcga atgggatgga atggaatgga aaggaatgga atggagtgga gtggaatgga      2040
     atggaatgga atggactcga tcacaatgga cttgaatgga atggactcga atgtaatgga      2100
     atggaatgca gtggaaagat atcgaatggg atggaatgga atggaaagga atggaatgga      2160
     aagcattgga gtgcaatcga atggaatgga atcgaacgga atggaattga atggaatcaa      2220
     atggaataga ttggaatgga atggaatgga atgaggtgga aacgaatgga agggaatgga      2280
     atcaaatgga atggaatgca atggactaca atggaaagga ctaaaatgga aggaaacgaa      2340
     aggaattgaa tagaatggaa tggaatcgaa tggaatggaa ctgaacggaa tggaatggat      2400
     tggagtgcaa tggaatggtc tcgaatggaa tggaatcaaa tggaatggat tctaatagaa      2460
     gggaatcgat tggaatggaa ccgaatggaa tggaagagaa tggcatcgaa tggaaccgaa      2520
     agaaatgcgg tgaaatggag tggagtggag tggaatggag gggaaaggaa tggggtgaaa      2580
     tggaattgaa tggagtgggg ttgagttgag tctaaagcag tgcaatgtaa tggaatgtga      2640
     aggaatggaa ttgtatgtag tgaagtggat tggagtggag tggaatggaa tgcaacagaa      2700
     tggaatggag tggagtggaa ggtaatggag aggagcgcag ggtaatggta tggactggac      2760
     tggaatggaa tggagtggaa tggaatggac tcgagtggaa tagactcgaa ttgaatggac      2820
     tcgagttgaa tggaatcaaa tcaaatggaa tggaatggaa tggaatggac tcgaatggaa      2880
     tggaatcgag tggaatggac tcgagtcgac tggaattgaa tggaatggac tctattggaa      2940
     tggactagaa tggaatgggc tcgaagggaa tggactcgaa tcaaacagaa tcaaatagaa      3000
     agaagtggaa tggaatgggc tcgaatggat tcgacaggaa tggaatggga tcaaatgaaa      3060
     cggaatcgaa tggaaagcaa tcaaatgaaa agtaatggaa tggaatggag tgaaatggaa      3120
     tggactcaag                                                             3130
//


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