Dbfetch

ID   ABBA01016546; SV 1; linear; genomic DNA; WGS; HUM; 640 BP.
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AC   ABBA01016546;
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PR   Project:PRJNA19621;
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DT   05-JUN-2007 (Rel. 92, Created)
DT   23-AUG-2014 (Rel. 121, Last updated, Version 4)
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DE   Homo sapiens CTG_1103276977484, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-640
RX   PUBMED; 17803354.
RA   Levy S., Sutton G., Ng P.C., Feuk L., Halpern A.L., Walenz B.P.,
RA   Axelrod N., Huang J., Kirkness E.F., Denisov G., Lin Y., Macdonald J.R.,
RA   Pang A.W., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D.A., Beeson K.Y., McIntosh T.C., Remington K.A.,
RA   Abril J.F., Gill J., Borman J., Rogers Y.H., Frazier M.E., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   "The Diploid Genome Sequence of an Individual Human";
RL   PLoS Biol. 5(10):E254-E254(2007).
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RN   [2]
RP   1-640
RA   Levy S., Sutton G., Ng P., Feuk L., Halpern A.L., Walenz B., Axelrod N.,
RA   Huang J., Kirkness E.F., Denisov G., Lin Y., MacDonald J.R., Wing A.,
RA   Pang C., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D., Beeson K.Y., McIntosh T.C., Remington K., Gill J.,
RA   Borman J., Johnson J., Resnick A., Rogers Y.-H., Frazier M., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   ;
RL   Submitted (18-MAY-2007) to the INSDC.
RL   J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850,
RL   USA
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DR   MD5; cb5d40bc9d34177c40a3bffe25a61085.
DR   ENA; ABBA010000000; SET.
DR   ENA; ABBA000000000; SET.
DR   ENA-CON; KI270438.
DR   ENA-CON; GJ212160.
DR   ENA-CON; GJ211997.
DR   ENA-CON; GJ212123.
DR   ENA-CON; DS486572.
DR   ENA-CON; GJ211960.
DR   BioSample; SAMN02981236.
DR   Ensembl-Scaffolds; ABBA01016546.1:1-640; homo_sapiens.
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CC   DNA Donor Name: J. Craig Venter | Date of Birth: October 14, 1946 |
CC   Sex: Male | Ethnicity: Caucasian | Descent: European - England
CC   This WGS project represents a composite haploid version of the
CC   genome where the highest scoring allele contained is represented in
CC   the consensus sequence.  The number of contigs may differ from
CC   those in the PLoS Biol. paper (PloS Biology 2007 5: e254) because
CC   some short sequences were found to be foreign and thus were
CC   suppressed. Scaffolds DS486015-DS490530 represent the 4528
CC   scaffolds that are discussed in the paper.  There are fewer than
CC   listed in the paper because 12 of the original were determined to
CC   be foreign, so were omitted here.  Scaffolds DS490531-DS490620 are
CC   the remaining multi-component scaffolds, not in the set of 4528.
CC   The chromosomes are records CM000462-CM000485, assembled from the
CC   scaffolds.
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FH   Key             Location/Qualifiers
FH
FT   source          1..640
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 640 BP; 138 A; 250 C; 37 G; 215 T; 0 other;
     aatcgagtcc attccattcc agtccattcc attcaattcc aatccattcc actcttttcc        60
     attcttttcc attccattcc attgcattct attccattcc agtccattcc actgcactcc       120
     actccactcc tctctgctca attcaattcc atcccattcc attccattcc tctccgttcc       180
     actgcactcc actccactcc actccattca attccatttc atcccattcc attccactcc       240
     actccactaa acttctctgc attcaattcg attccattcg atgccattcg attcaattcc       300
     attcaattcc atttcaatct attccattct attcgtttcc attccattca agtccaatct       360
     attcgagtcc ttcccattcc agttgattcc attccattgc attccatttg agtccattcc       420
     atttttggcc attcaattgg agtccattcc aatccagtcc attgcattgc agtacattcc       480
     attccactcc actccactgc actccaccac attccatgcc actctacaca actccgctgc       540
     actccactcc actccattcc attccactcc tctacacccc actccactcc attccactcc       600
     actccaatcc attccattcc attccactgc attccactcc                             640
//