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EBI Dbfetch

ID   ABBA01015877; SV 1; linear; genomic DNA; WGS; HUM; 1117 BP.
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AC   ABBA01015877;
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PR   Project:PRJNA19621;
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DT   05-JUN-2007 (Rel. 92, Created)
DT   23-AUG-2014 (Rel. 121, Last updated, Version 4)
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DE   Homo sapiens CTG_1103276914606, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-1117
RX   PUBMED; 17803354.
RA   Levy S., Sutton G., Ng P.C., Feuk L., Halpern A.L., Walenz B.P.,
RA   Axelrod N., Huang J., Kirkness E.F., Denisov G., Lin Y., Macdonald J.R.,
RA   Pang A.W., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D.A., Beeson K.Y., McIntosh T.C., Remington K.A.,
RA   Abril J.F., Gill J., Borman J., Rogers Y.H., Frazier M.E., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   "The Diploid Genome Sequence of an Individual Human";
RL   PLoS Biol. 5(10):E254-E254(2007).
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RN   [2]
RP   1-1117
RA   Levy S., Sutton G., Ng P., Feuk L., Halpern A.L., Walenz B., Axelrod N.,
RA   Huang J., Kirkness E.F., Denisov G., Lin Y., MacDonald J.R., Wing A.,
RA   Pang C., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D., Beeson K.Y., McIntosh T.C., Remington K., Gill J.,
RA   Borman J., Johnson J., Resnick A., Rogers Y.-H., Frazier M., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   ;
RL   Submitted (18-MAY-2007) to the INSDC.
RL   J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850,
RL   USA
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DR   MD5; 0bafaa589a23f6e2d2f97c7bc376a658.
DR   ENA; ABBA010000000; SET.
DR   ENA; ABBA000000000; SET.
DR   ENA-CON; GJ211996.
DR   ENA-CON; GL000198.
DR   ENA-CON; GJ212106.
DR   ENA-CON; GJ212159.
DR   ENA-CON; DS486459.
DR   ENA-CON; GJ211959.
DR   ENA-CON; GJ212122.
DR   BioSample; SAMN02981236.
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CC   DNA Donor Name: J. Craig Venter | Date of Birth: October 14, 1946 |
CC   Sex: Male | Ethnicity: Caucasian | Descent: European - England
CC   This WGS project represents a composite haploid version of the
CC   genome where the highest scoring allele contained is represented in
CC   the consensus sequence.  The number of contigs may differ from
CC   those in the PLoS Biol. paper (PloS Biology 2007 5: e254) because
CC   some short sequences were found to be foreign and thus were
CC   suppressed. Scaffolds DS486015-DS490530 represent the 4528
CC   scaffolds that are discussed in the paper.  There are fewer than
CC   listed in the paper because 12 of the original were determined to
CC   be foreign, so were omitted here.  Scaffolds DS490531-DS490620 are
CC   the remaining multi-component scaffolds, not in the set of 4528.
CC   The chromosomes are records CM000462-CM000485, assembled from the
CC   scaffolds.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1117
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 1117 BP; 347 A; 63 C; 450 G; 257 T; 0 other;
     atggaatgga acgtagtgta gtggagtgta gtgtagtgga gtggagtgca gtggagtgga        60
     atggagtgta atgaaatggg atataatcta atagaatgga gtggagtgga gtggactgga       120
     atggtgtgga atgagatggg atgcaatgga gtggagtgga gtggagtgga atgaaaggaa       180
     tgtagtggag tggagtggag tggaatggaa ggaaatggag tagaatggaa tggaatggaa       240
     tggtgaaatg aaatgtgagc tgagattgtg ccactgcact ccagcctgtt tgacagtgag       300
     atcctgtcga aagaaaggta tggaataaaa tggaatggaa tgaaatggaa tggagtggat       360
     tggagtagag tttagtggaa tgctgtggaa tggaatggga cggaatggaa tggaatggaa       420
     tgtcttggag tagagtggat tggagtggag tggagtggaa tggagtggaa tagaatggga       480
     ttcaatggaa tggagtggaa tggagtagag tggactggaa tggagtggaa tggaatgtaa       540
     cagaatggaa tggaatggaa tggaatggaa tggaatggaa aggattggag tggaatggaa       600
     tggaatggaa tggaatggtg aaatgaaatg tgagctgaga tactgctgct gcactccagc       660
     ctgggtgaca cagtgagatc ctgtcgaaag aaaggaatgg aatgaaatgg aatggaatag       720
     agtggagtgg agtggagtgg agaggaatag agtggaatgt aatgggatgg tttggaatgg       780
     agtggagtgg attggagggg tttatagtgg aatggagtgg atggaatgga atggagttga       840
     gtggagtgaa gtggagtgga gtgcagtgga atgttatgga atggaatgga atggaatgca       900
     atggaatgct gaagtgaaat atcagctgag attgctccac tgcactccag cctgggtgac       960
     agagtgagat cctgtcgaaa gaaaggagtg gaatggaatg gagtggtgtg gtatggaatg      1020
     gaatggaagg gagtgtagtt tagtctactg tactgtagtg gagtggagtg gagttgaatg      1080
     cgatgggatg gaatggaagg gagtggagtg gagtgga                               1117
//


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