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EBI Dbfetch

ID   ABBA01015383; SV 1; linear; genomic DNA; WGS; HUM; 8634 BP.
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AC   ABBA01015383;
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PR   Project:PRJNA19621;
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DT   05-JUN-2007 (Rel. 92, Created)
DT   23-AUG-2014 (Rel. 121, Last updated, Version 4)
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DE   Homo sapiens CTG_1103276990107, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-8634
RX   PUBMED; 17803354.
RA   Levy S., Sutton G., Ng P.C., Feuk L., Halpern A.L., Walenz B.P.,
RA   Axelrod N., Huang J., Kirkness E.F., Denisov G., Lin Y., Macdonald J.R.,
RA   Pang A.W., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D.A., Beeson K.Y., McIntosh T.C., Remington K.A.,
RA   Abril J.F., Gill J., Borman J., Rogers Y.H., Frazier M.E., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   "The Diploid Genome Sequence of an Individual Human";
RL   PLoS Biol. 5(10):E254-E254(2007).
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RN   [2]
RP   1-8634
RA   Levy S., Sutton G., Ng P., Feuk L., Halpern A.L., Walenz B., Axelrod N.,
RA   Huang J., Kirkness E.F., Denisov G., Lin Y., MacDonald J.R., Wing A.,
RA   Pang C., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D., Beeson K.Y., McIntosh T.C., Remington K., Gill J.,
RA   Borman J., Johnson J., Resnick A., Rogers Y.-H., Frazier M., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   ;
RL   Submitted (18-MAY-2007) to the INSDC.
RL   J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850,
RL   USA
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DR   MD5; 2c2241df03868698437be7bfe28ba745.
DR   ENA; ABBA010000000; SET.
DR   ENA; ABBA000000000; SET.
DR   ENA-CON; KI270435.
DR   ENA-CON; DS486580.
DR   ENA-CON; GJ212157.
DR   ENA-CON; GJ212120.
DR   ENA-CON; GJ211957.
DR   ENA-CON; GJ211994.
DR   BioSample; SAMN02981236.
DR   Ensembl-Scaffolds; ABBA01015383.1:1-8634; homo_sapiens.
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CC   DNA Donor Name: J. Craig Venter | Date of Birth: October 14, 1946 |
CC   Sex: Male | Ethnicity: Caucasian | Descent: European - England
CC   This WGS project represents a composite haploid version of the
CC   genome where the highest scoring allele contained is represented in
CC   the consensus sequence.  The number of contigs may differ from
CC   those in the PLoS Biol. paper (PloS Biology 2007 5: e254) because
CC   some short sequences were found to be foreign and thus were
CC   suppressed. Scaffolds DS486015-DS490530 represent the 4528
CC   scaffolds that are discussed in the paper.  There are fewer than
CC   listed in the paper because 12 of the original were determined to
CC   be foreign, so were omitted here.  Scaffolds DS490531-DS490620 are
CC   the remaining multi-component scaffolds, not in the set of 4528.
CC   The chromosomes are records CM000462-CM000485, assembled from the
CC   scaffolds.
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FH   Key             Location/Qualifiers
FH
FT   source          1..8634
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 8634 BP; 2900 A; 1533 C; 1732 G; 2469 T; 0 other;
     agaatgcttc tgtctagttt atatgtgaag atattattgt ttcactatag gcctcaaagc        60
     actcagaaat atccctttgc actttgtata aaaaattctt tccaaactgc tcaatgaaaa       120
     gaaagattca tctctgtgag atgaatgcac acataaaata tacgtttctc agaatgcttc       180
     tgtctagttt aatgtgaaga tatttccttt ttcaccatag gccttaaact gctcacaaat       240
     atccctctgc agatactaca aaaagactgt ttccaaactg ctccaagaaa agaaaggttc       300
     aaatctgtga ggtgaatgca cacatcacaa aggagtttct cagaatgatt ctatctactt       360
     tttatgtgaa gataattctt tttcaccata ggcatcaaac ggctcaaaaa tatctctttg       420
     cagattgtac aaaaggatgg tttccaatct gctcaatcaa aagaaaggat cagctctgtg       480
     atatgagtcc acgcatcaca aataagtttc tcagaaagct tctttttagt gtttttgtga       540
     agatatttcc tttttctcca taggcctaaa agcactgcaa atatccattt gcagattcta       600
     caaaaaggct gtttccaaac tgctcaatca aaagaaaatt tcacctctgt gagattaaag       660
     cacacatcac aaagcatttt ctcagaaaga ttctgtctag tttttatgtg aaggaatttc       720
     ctatttcacc ttaggctgca aagggctcac aaatatccgt ttgcatattc aaaaaaaaag       780
     actgtttcca aactgttcac acaaaagaaa gattcaactc tgtgagatga atgcacacat       840
     cagaaagaga tttctcagaa tgcttctgtc tagtttttat gtgaagatat ttctttttca       900
     ccatcagcca caaacggctc agaaatatcc ctttgcagat cttacaaaaa gactgtttcc       960
     aacctgctca atcaaaagaa agtttcaatg ctgatagacg aatgcacaca tcaaaaagaa      1020
     ggttctcaga acacttctgt tttgctttta tttgaagata tttccttttt caccatagga      1080
     ctcagtgggc tcataaatat ctctttgcag attctacaaa aggactgttt agaaaactgc      1140
     tgaatccaaa gaattattca accctgtgag atgaatgcac acatcacaaa gaggttttgc      1200
     agaatgcatc tgtctagttt ttatgtgaag atatttcttt tttcaccata ggcctcaaag      1260
     cgctccaaat acccatttgt agattctaca aaaagagtgt ttccaatctg ctctatcaaa      1320
     aagaaaggtt caatcctgtg acacggaagt aaacatcaca aagaagtttc tcggaaagct      1380
     tctgtctagt ttatatgtga agatatttcc tattttacca tgggccatat agggctcaca      1440
     aatatttttt gcaaattcta caaaaagact gtttccaaac tgctcaatcc aaagaaagtt      1500
     tcaacacttt gagatgaatg ggcacaccac aaaaaagttt atcagaatgc ttctatctag      1560
     tttttatgtg aagatatttc tttttcaccc taggcttcaa tgggctcaga aatatccctt      1620
     tgcagattct acgaaaggac tgtttccaaa cttctcaatc aaagaaaggt tcaactctat      1680
     aagatgaatg tacacatcac atggatgttt ctctcaatcc ttctgtatat ttttttatgt      1740
     gaaggtattt cctttttcag catgggcctc aaagtgctca aaatatccat ttgctgattc      1800
     cacagaaaga ctgtttccaa actcctcaat cgaagaagga ttcaactgta tgagatgaat      1860
     gcacacatca cagagatgtt tcttacaatg cttctgtcta ttttttatgt gaaggtattt      1920
     actttttcac caaaggcctc aaagcgctcc aaacatccat ttgctgattc cgcaaaaaga      1980
     ctgtttccaa actgctcaat caaaagaaag ctacaactcc gtgtgttgaa agcacacatc      2040
     acaaagaagt ttctgagaag gattctgtct agtttttctg tgaggacatt tcctgtttca      2100
     ccatgggcca taaagggctc aaaaatattt ttcgcagatt ctacaaaaag actgtttcca      2160
     aacttctcaa tccaaagaaa ggttcaactc tgtgagatga atggacacaa gacaaagaag      2220
     tttctcagaa tacttctgtc tagggtttat gtgagatatt tcctttttca ccataggcct      2280
     caaagcactc caaatatcca tttgcagatt ccacaaaaag actgtttcca aattgctcaa      2340
     tgaaaagaga gtttcaactc tgtgaggtga aagcacacat cacaaagaag tttctcagaa      2400
     tgtatctttc tagttttttt gtgaagatat tttctttttc accataggcc tcaaagcact      2460
     ccaactatcc atttgcagat tctaccaaaa gactgtttac aaactgctaa atcaaaagaa      2520
     aatttcagct ctgtgatatg aatgcaggca tcacaaagaa gtttctcaga aagcttctgt      2580
     ttagtgttta tctgaagata tttccttttt caccataggc ctcaaagctc tccaaataag      2640
     catttccaga ttctataaaa agtctgtttc aaaactgctc aatgaaaaga aaggttcaac      2700
     tctgtgagat gaaagcacat atcacaaaga agtttctcag aatgtttctt tctagttttt      2760
     ttgtgaagat atttcctttt tcaccattgg cctcaaagca ctccaaatat ccatttgcag      2820
     attctacaaa aagactgttt acaaactgct caatcaaaac agggtttcaa cgttgtgaga      2880
     tgaatgcacg cattacaaag tagtttctca gaacgcttct gtttagtttt tatgtgaaga      2940
     tatttgcttt tccaccatag gcctcaaaac tctccaatta tccatttgca gattatgcaa      3000
     aaagagtgtt tccaaactgc tcagtcaaaa gaaatgctta actctttgag atgaaagcac      3060
     tcattaaaaa taagtttctc agaaagtttc tgtctagctt ttatgggaag atatttccta      3120
     tatcaccaaa ggcctcaatc ggctgagaaa tacccctttg gtgattctac aataggaatg      3180
     tttccaaact gctctagcaa aggaaaggtt caaatctgtg agatgaatgc acagatcaca      3240
     aaatgtttct cagaaagttt ctgtgtagtt tttatgtgaa gatatttcct agttcaccat      3300
     aggcctcaaa gggttcacaa ttatcccttt gtagatttta caaaaagact gtttccaaat      3360
     attcaatcaa agaaatgttc agctgtgtga gaagactgca agcttcaaaa agaagtttct      3420
     cagaattctt ctgtcgaatt tttatgtgat gatatttcct tttttaccac aagcctcaaa      3480
     gcgctccaaa tatccatttg cagattctac aaaaagagtg tttccaaact gatcaaccaa      3540
     aagaaaagtt caactctgtg agatggaagc acacatcaca aagaagtttc ttagaaatct      3600
     tctgtctagt ttttatggga aaatatatca tatttcacca tagacctcaa tgggctcaga      3660
     aatatacctt tgaagattct acaaaaggat tgtttccaaa ctgctcaatc caaagaaagg      3720
     ttcaacactg tcagatgaat tcacacatca caaagaagtt tctcagaaag cttctgtcta      3780
     gtttttatgt gaatatattt ccttgttcac cataggcctc aaattcgcgc aaacatccct      3840
     ctacagatac tacaaaaaga cagtttccaa actgtttaat ataaagaagg gttcaactct      3900
     gtgtgataaa tgcacacatc accaagaagt ttctcagaat gcttctgtct agtttttatg      3960
     tgaagatgtt tcctttctca agaaggcctc acaccgctcc aaatatccat ttgcagattc      4020
     tacaaaaaga tggtttccaa actgctcaat gaataggaag gttcaactct gtgagatgaa      4080
     agcacacgta acaaagtaga ttcatagaat gttgctttct agtttttatg tgaagatatt      4140
     tcctttttca ccatagtact caaactgctc caaatatcca tttgcagatt ctagagaaag      4200
     tgtgtttcca aactgctcca tcaaaagaaa ggttctactc tgtgagatga aagcacacat      4260
     cacaaagaag tttctccgaa atcttctgac tagtttttat gtgaagatat ttcctatttc      4320
     accataggcc tcaaagggct cacaaatatc cctttgcaga ttctacaaaa ggactgtttt      4380
     gaaactgctc aatcagaaga aaggttaaac tctgtgagat gagtgcatac atcacaaaga      4440
     agtttctcag aatgcttctg tctagttttc aggtgaagat atttcttttt tcaccatagg      4500
     cctcaaagtg ctccaaatat ccatttccat attctacaaa aaggccgttt ccaaactcct      4560
     caatcaaaag agaggttcaa ctctgtgtga tgaaagcaca cttcatgaag aagtttctca      4620
     gaatgcctct gtctagtttt tatgtgaaga tatttcctat ttcaccttaa gccataaagg      4680
     gctcacaaat atccctctgc agattctaga aaaggactct ttccaaactg ctaaataaaa      4740
     agaaaagttc aactctgtga gatgaatgca cacatcgcaa ataagtttct ctgaaagctt      4800
     ctgtccactt tttatgtgaa gatatttccc ttttcaccat acctatcaaa gcgctcaaaa      4860
     tgtccctttg caaattctct gaaaagactg tttccaaact tctcaatcaa aagaatggtt      4920
     caactctgtg agatgaatgc acgtatcaca aagaagtttc tctgaaacct tctgtgtagt      4980
     ttttatgtga agatatttcc tttttcacca taggcctcaa gccactcaca aatatccctt      5040
     tgcatatttt acaagaacag agtttccaga ctcatcaaag aatagaaaat tttttgtctc      5100
     tgagatgagt gcacaccttg caaaacagct tctcagaaac attctttata gtttttattg      5160
     aagatatttc ctttttcacc ataggcctca taaagctgac aaatatccct ttgaagattc      5220
     tacaaaaagt ctgtttacaa actgctcaat caaaagaatg gttcaactct gtgagatgaa      5280
     tgcacacacc acaaagaggt ttctcagaaa tcttctgtct agtttttatg tgaagatatt      5340
     ttctttctca acataggcct caaagggctc acaattatcc ctttgcagat tctacaaatg      5400
     gacagttttc aaactgctca gtcaaaagac tgtttcaact atgtgagatg aatgtacaca      5460
     tgacagagag gtttctcaga gaacttctgt ctatttatta tgtgaaggta tttccttttt      5520
     caccaaaggc ctcaaagcgc tcacaaatat ctccttgcag attctacaag aacagaatac      5580
     ccaaactgat taatcagaag aatgctacac ataaaatctc tggaagaaaa cctaggcaaa      5640
     accattcagg acataggcat gggcaaggac ttcatgtcta aaacacctaa agcaatggca      5700
     acaaaagcca caattgacaa atgggatcta attaaactaa ggagcttctg cacagcaaaa      5760
     gaaaccacca tcagagtgaa caggaatcct acagaatggg agaatacttt tgcaacctac      5820
     tcatctgaca aagggctaat atcaggaatc tacaatgaac tcagactaat ttacaggaaa      5880
     aaaacaaaca accccatcaa aaagtgggtg aagtatatga acagacattt ctcaaaagaa      5940
     gacatttatg cagccaatga acaaatgaaa aaatgcttat cttcactggc catcagagaa      6000
     atgcaagtca aaaccacaat gagataccat ctcacaccag ttagaatggc gatcattaaa      6060
     aagtcaggaa acaacaggtg ctggagagga tgtgagaaat aggaacactt ttgtgctgtc      6120
     ggttgcagtg taaactagtt caaccattgt ggaagtcggt atggtgattc ctcagggatc      6180
     tagaactaga aataccattt gacctagcca tcccattact gggtatatac ccaaaggatt      6240
     ataaatcatg ctgctataaa gacacataca cacgtatgtt tatagtggca ctattcacaa      6300
     tagcaaagac ttggaaccaa tgtaaatgtc caacaacgat agactgaatg aagaaaatgt      6360
     ggcacatata catcatggaa cactatgcgg ccataaaaaa tgatgacttc atgtcctttg      6420
     tagggacatg gatgaagctg gaaaccatca ttctcagcga actatcacaa ggacaaaaaa      6480
     taaaacacca catgatctca ctcatagttg ggaattgatc aaagaacaca tggacacaga      6540
     aagagaacca tcacacacca caaaccagag agtgtagtcc ggtgtgggga gggggaggga      6600
     tagacttagg agatatacct aatgcataca aacatggcaa atgtatacat atgtaacaaa      6660
     cctacacgtt gtacacatgt tccctaaaac ataaagtata ataataataa aagtaaataa      6720
     ataattaaac agagagctcc aaaaaaaata agaatggttc aactctatga gatgaatgca      6780
     cacatcacaa ataagttttc agaaagtttc tgtctacatt ttatatgaag atatttcctt      6840
     tttcaccata ggcctcaaag cactcacaaa tatccctttg cagattctac aagaaaagat      6900
     tttcccatct gctcaatgaa aagaaatgtt tacctctgtg agatgaatgc atacattaca      6960
     aagcagtttc tcagaaacct tctgtctagt ttttatgtga agatatttac tttttcccca      7020
     taggcctcaa agcgctcaca aatatccttt gttgattcta caaaaagact gtttccaaac      7080
     tgctcaatca aaagaatggc tcaactgatt cagatgagtg cacacataac acagaagtgt      7140
     cccagaaagc ttctgtctag ttttcttgtg aagatatttc cttttccacc attggcccac      7200
     aagtgttcac aaataatcct ttgcaaattc tacaaaaaga cggtttccaa tacactcaat      7260
     caatagaaag gttcaattct gtgagatgaa ttcacacatc aaaaaacagt ttctcagaaa      7320
     ccttttttct agtttttctg tgaagatatt tgctttttca ccataggctt caaagcgctc      7380
     acaaatgtcc ttttgcagat tctacaaaaa gactgtgacc aaactcctca atcaatagaa      7440
     tggatcgact ctgtgaaatg aatgaacaca tcacaaaaaa gtttctcaga atgtttctgt      7500
     ctagttttca cgtgaagatt ggagtacagt ggaatggaat ggaatggagt gaagtggaat      7560
     ggaatggaat ggaatggaat ggaatggaat ggaatgaagt ggaatggaat ggaatggagt      7620
     ggagtggagt gatgtgtatt ggactggagt ggagtggagt ggaatggaat ggagtggatt      7680
     tgaaaggaat ggaatggaat ggaggggagt ggagtggagt ggaatggagt ggaatggaaa      7740
     ggagtggagt ggaatggaat ggagtggagt ggagtggaat ggagtggagt ggaatggaat      7800
     ggagtggaat agaatggagt ggagtggaat ggattggagt ggagtgaagt ggagtggatt      7860
     ggagtggagt ggagtggagt tgaaagtagt ggaatggtat ggaatggaat tgaatggaat      7920
     ggagtggaat ggaatggaat gtagtggaat ggaatggagt ggagtggaga agagtggaat      7980
     gtagtggaat ggagtggagt gcagtggagt tgagtagagt ggattggaat gcagtggaat      8040
     ggaatggagt ggagtggatt ggagtggagt ggagaggaat ggagtggaat tgaatggagt      8100
     ggagtggaat ggaatggaat ggaatggaat ggaatggaat ggaatggaat ggaatggaat      8160
     gaaagggaaa ggaatggaat gcagcagaat ggaacagaaa gaagtacagt ggagtggagt      8220
     tgagtggaga gggtcggagt ggagtggaat ggaatggaat ggaatggaac ggaatagaat      8280
     ggaatggaat ggagtagagt ggaatggagt ggactggagg ggagtggagt ggagtggaat      8340
     ggaatggaat ggaatggcat ggaatggaat tgagtggagt ggaatggaat ggagtggaac      8400
     ggagtggaaa ggagtggagt ggaatggaag ggagtggagt ggaatggagt ggagtggagt      8460
     ggtgtagaat ggattggaat ggaatggaag ggcatggagt ggagtggaga ggagtggaat      8520
     ggagtggatt ggagtgaggt ggaatgcaat ggagtagaat ggaatggagt ggagtggagt      8580
     tgagtggagt ggatcggagt gcagtgcaat ggaatggaat ggagtggagt ggag            8634
//


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