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EBI Dbfetch

ID   ABBA01003716; SV 1; linear; genomic DNA; WGS; HUM; 2165 BP.
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AC   ABBA01003716;
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PR   Project:PRJNA19621;
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DT   05-JUN-2007 (Rel. 92, Created)
DT   23-AUG-2014 (Rel. 121, Last updated, Version 4)
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DE   Homo sapiens CTG_1103276829951, whole genome shotgun sequence.
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KW   WGS.
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-2165
RX   PUBMED; 17803354.
RA   Levy S., Sutton G., Ng P.C., Feuk L., Halpern A.L., Walenz B.P.,
RA   Axelrod N., Huang J., Kirkness E.F., Denisov G., Lin Y., Macdonald J.R.,
RA   Pang A.W., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D.A., Beeson K.Y., McIntosh T.C., Remington K.A.,
RA   Abril J.F., Gill J., Borman J., Rogers Y.H., Frazier M.E., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   "The Diploid Genome Sequence of an Individual Human";
RL   PLoS Biol. 5(10):E254-E254(2007).
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RN   [2]
RP   1-2165
RA   Levy S., Sutton G., Ng P., Feuk L., Halpern A.L., Walenz B., Axelrod N.,
RA   Huang J., Kirkness E.F., Denisov G., Lin Y., MacDonald J.R., Wing A.,
RA   Pang C., Shago M., Stockwell T.B., Tsiamouri A., Bafna V., Bansal V.,
RA   Kravitz S.A., Busam D., Beeson K.Y., McIntosh T.C., Remington K., Gill J.,
RA   Borman J., Johnson J., Resnick A., Rogers Y.-H., Frazier M., Scherer S.W.,
RA   Strausberg R.L., Venter J.C.;
RT   ;
RL   Submitted (18-MAY-2007) to the INSDC.
RL   J Craig Venter Institute, 9704 Medical Center Drive, Rockville, MD 20850,
RL   USA
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DR   MD5; 9423c1b46a48aa6331a77ab5c702ac9d.
DR   ENA; ABBA010000000; SET.
DR   ENA; ABBA000000000; SET.
DR   ENA-CON; GJ211840.
DR   ENA-CON; KI270304.
DR   BioSample; SAMN02981236.
DR   Ensembl-Scaffolds; ABBA01003716.1:1-2165; homo_sapiens.
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CC   DNA Donor Name: J. Craig Venter | Date of Birth: October 14, 1946 |
CC   Sex: Male | Ethnicity: Caucasian | Descent: European - England
CC   This WGS project represents a composite haploid version of the
CC   genome where the highest scoring allele contained is represented in
CC   the consensus sequence.  The number of contigs may differ from
CC   those in the PLoS Biol. paper (PloS Biology 2007 5: e254) because
CC   some short sequences were found to be foreign and thus were
CC   suppressed. Scaffolds DS486015-DS490530 represent the 4528
CC   scaffolds that are discussed in the paper.  There are fewer than
CC   listed in the paper because 12 of the original were determined to
CC   be foreign, so were omitted here.  Scaffolds DS490531-DS490620 are
CC   the remaining multi-component scaffolds, not in the set of 4528.
CC   The chromosomes are records CM000462-CM000485, assembled from the
CC   scaffolds.
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FH   Key             Location/Qualifiers
FH
FT   source          1..2165
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /db_xref="taxon:9606"
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SQ   Sequence 2165 BP; 706 A; 457 C; 392 G; 610 T; 0 other;
     tctgtgagtt gaacgaacac atcacaacgc agtttgaggg aatgattctg tctagttttg        60
     aaacgaagat atttcctttt ctgccattga cataaacgct tgaaatctac agttgccaat       120
     tgcacaaata gagtgtttca aatctgctct gtctaaggga acgttcaact ctgtgagttg       180
     aatgcacaca acacaaggaa gttactggga attcttctgt ctagcctgac aggaaaaaaa       240
     cccttttcca acgaaggcct ctaagtggtc caattatcca cgtgcagagt ttacaaacag       300
     agtgtttcaa actgctgaat gaaaagaaaa gttaaactct gagagttgaa cgcacacatc       360
     acagagcagt ttctgagaat gattctgtct agtttttata cgacgatatt tacttttctg       420
     cttttggccc caaagcgctt gaaatctcca cttgcaaatc caaaaaaaca gtgtttcaaa       480
     tctgctctct ctaaatgaaa gttcaactct gtcagttgaa tacacacaac acaaggaagt       540
     tactgagaat tcttctgtct agccttaaat gaaaaaaacc cgtttccaac gaaggcctca       600
     aagaagtcca aatatccacg tgcagacatt acaaacagag tgtttcctaa ctgctctatg       660
     aaaaaaaggt taaactctgt gagttgaatg cccacagcac aaaggagttt ctgagaatca       720
     ttctgtctag tttttatacg aagatatttc cttttctacc attgatctca aagcggctga       780
     aatctccact tgcaaattcc acaaaaagag tgtttcaagt ctgctctgtg taaaggatcg       840
     ttcaactctg tgagttgaac acacacaaaa caaggaagtt actgagaatt cttctgtcta       900
     gcagaatatg aagaaatccc gtttccaacg aaggcctcaa agaggtctga atatccactt       960
     gcagactttt cagaaagagt gtttcctaac tgctctatga aaagaaaggt taaactctgt      1020
     gagttgaacg cacacatcac aaaggagttt ctgagaatca ttctgtctag tttctatagg      1080
     aagatatttc ctattcaacc attgacctca aagcggctga aatctccacc tgcaaattcc      1140
     ataaaaagag tgtttcaagt ctgctctgtg taaaggatcg tacaactctg tgagttgaat      1200
     acacacaaca aaaagaagtt actgagaatt cttctgtcta gcagaatatg aagaaatccc      1260
     gcttccaacg aatgcctcaa agaggtctga atatccactt gcagactttt cagaaagagt      1320
     gtttcctaac tgctctatga aaagaaaggt taaactctgt gagttgaacg cacacatcac      1380
     aaaggagttt ctgagaatca ttctgtctag tttttatacg aagatatttc cttttctatc      1440
     attgacctca aagcggctga aatctccact tgcaaattcc acaaatagag tgtttcaagt      1500
     ctgctctgtg taaaggatcg ttcaactctg tgagttgaat acacacaaca caaggaagtt      1560
     actgagaatt cttctgtgta gcagaagatg aagaaatccc gtttccaacg aaggccacaa      1620
     gatgtcagaa tatccactta cagactttac aaacagagtg tttcctaact gctctatgaa      1680
     cagaaaggtt aaactctgtg agctgaacga acacatcaca acgcagtttg tgggaatgat      1740
     tctgtctagt tttgaaacga agatatttcc ttttctgcca ttgaccttaa agcgcttgaa      1800
     atctacactt gcaaattgca caaatacagt gtttcaaatc tgctctgtct aagggaacgt      1860
     tcaactctgt gagttgaatg cacacaacac aaggaagtta ctgggaattc ttctgtttag      1920
     ccttacatga aaaaaacccg tttccaacga aggcctctaa gtggtcaaaa tatccacgtg      1980
     cagactttac aaacagagtg tttccaaacc gctgaatgaa aagaaaagta aaactctgag      2040
     aggtaatccc acacatcacg cagcagtttc tgagaatgat tctgtccagt ttttatacca      2100
     agatatttcc ttttctgcct ttgtccccaa agcgcttgaa atctccactt gcaaattcca      2160
     caaaa                                                                  2165
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