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EBI Dbfetch

ID   X17377; SV 1; linear; genomic DNA; STD; HUM; 508 BP.
XX
AC   X17377;
XX
DT   25-JUL-1990 (Rel. 24, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 8)
XX
DE   Human PGP9.5 gene for neuron-specific ubiquitin C-terminal hydrolase, exons
DE   1 & 2
XX
KW   hydrolase; ubiquitin C-terminal hydrolase; ubiquitin hydrolase.
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-508
RA   Day I.N.M.;
RT   ;
RL   Submitted (20-DEC-1989) to the INSDC.
RL   Day I.N.M., University Department of Clinical Biochemistry, South
RL   Laboratory Block Level D, Southampton General Hospital, Tremona Rd.,
RL   Southampton SO9 4xy, U.K..
XX
RN   [2]
RP   1-508
RX   PUBMED; 2163617.
RA   Day I.N.M., Hinks L.J., Thompson R.J.;
RT   "The structure of the human gene encoding protein gene product 9.5
RT   (PGP9.5), a neuron-specific ubiquitin C-terminal hydrolase";
RL   Biochem. J. 268(2):521-524(1990).
XX
RN   [3]
RP   1-508
RX   DOI; 10.1089/dna.1993.12.107.
RX   PUBMED; 8471161.
RA   Onno M., Nakamura T., Mariage-Samson R., Hillova J., Hill M.;
RT   "Human TRE17 oncogene is generated from a family of homologous polymorphic
RT   sequences by single-base changes";
RL   DNA Cell Biol. 12(2):107-118(1993).
XX
DR   MD5; 5f7fac36f25232ffb74308f2dbf66415.
DR   EPD; EP73536; HS_UCHL1.
DR   Ensembl-Gn; ENSG00000154277; homo_sapiens.
DR   Ensembl-Tr; ENST00000284440; homo_sapiens.
DR   Ensembl-Tr; ENST00000503431; homo_sapiens.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..508
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone_lib="lambda-2001"
FT                   /cell_type="lymphocyte"
FT                   /tissue_type="blood"
FT                   /db_xref="taxon:9606"
FT   TATA_signal     268..273
FT   mRNA            join(297..379,485..496)
FT                   /partial
FT   prim_transcript 297..>508
FT   exon            297..379
FT                   /number=1
FT   CDS             join(347..379,485..496)
FT                   /partial
FT                   /product="neuron-specific ubiquitin carboxylterminal
FT                   hydrolase"
FT                   /db_xref="GOA:P09936"
FT                   /db_xref="HGNC:HGNC:12513"
FT                   /db_xref="InterPro:IPR001578"
FT                   /db_xref="PDB:2ETL"
FT                   /db_xref="PDB:2LEN"
FT                   /db_xref="PDB:3IFW"
FT                   /db_xref="PDB:3IRT"
FT                   /db_xref="PDB:3KVF"
FT                   /db_xref="PDB:3KW5"
FT                   /db_xref="PDB:4DM9"
FT                   /db_xref="PDB:4JKJ"
FT                   /db_xref="UniProtKB/Swiss-Prot:P09936"
FT                   /protein_id="CAA35249.1"
FT                   /translation="MQLKPMEINPEMLNK"
FT   intron          380..484
FT                   /number=1
FT   exon            485..496
FT                   /number=2
FT   intron          496..>508
FT                   /number=2
XX
SQ   Sequence 508 BP; 94 A; 167 C; 137 G; 110 T; 0 other;
     ggtttccaga aacttcgccc aaaattaaag actccatcaa aaggactgct ccatacactc        60
     aaggaacacc caccaacaaa tcccgtctcc acaaccacca gattatctca ccggcgagtg       120
     agactgcaag gtttgggggc ccggccgtac cactccgcgc tgcgcacggg gggttcgtac       180
     ccatctggcc gcgaccgtcc gtttccccct cgcttggttc tgcccctgct ccccctgcac       240
     aggcctcaca gtgcgtctgg ccggcgcttt atagctgcag cctggcgctc cgctccgtag       300
     ctgtttttcg tcttccctag gctatttctg ccgggcgctc cgcaagatgc agctcaagcc       360
     gatggagatc aaccccgagg tgagcgccag gtgcaccgct acccggagag cgcgaggccg       420
     agggaggggg agccgagtcg ctgatcggtt cggttttgcc tttttctttg catttgcctt       480
     tcagatgctg aacaaagtga gtggcgtc                                          508
//


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