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EBI Dbfetch

ID   U52165; SV 1; linear; genomic DNA; STD; HUM; 2613 BP.
XX
AC   U52165;
XX
DT   31-JUL-1996 (Rel. 48, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 4)
XX
DE   Human tumor necrosis factor receptor 2 (TNFR2) gene, exon 10 and complete
DE   cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-2613
RX   DOI; 10.1006/geno.1996.0327.
RX   PUBMED; 8661109.
RA   Beltinger C.P., White P.S., Maris J.M., Sulman E.P., Jensen S.J.,
RA   LePaslier D., Stallard B.J., Goeddel D.V., de Sauvage F.J., Brodeur G.M.;
RT   "Physical mapping and genomic structure of the human TNFR2 gene";
RL   Genomics 35(1):94-100(1996).
XX
RN   [2]
RP   1-2613
RA   Beltinger C.P., White P.S., Maris J.M., Sulman E.P., Jensen S.J.,
RA   LePaslier D., Stallard B.J., Goeddel D.V., deSauvage F.J., Brodeur G.M.;
RT   ;
RL   Submitted (25-MAR-1996) to the INSDC.
RL   Christian P. Beltinger, Division of Oncology, ARC Rm. 902 D, Childrens's
RL   Hospital of Philadelphia, 324 South 34th Street, Philadelphia, PA
RL   19104-4318, USA
XX
DR   MD5; 6968881e66596686c1359b3231da3a98.
DR   Ensembl-Gn; ENSG00000028137; homo_sapiens.
DR   Ensembl-Tr; ENST00000376259; homo_sapiens.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2613
FT                   /organism="Homo sapiens"
FT                   /chromosome="1"
FT                   /map="1p36.2"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:9606"
FT   intron          <1..124
FT                   /gene="TNFR2"
FT                   /number=9
FT   mRNA            join(U52156.1:1..167,U52157.1:7..106,U52158.1:114..242,
FT                   U52159.1:7..156,U52160.1:7..100,U52161.1:95..330,
FT                   U52162.1:83..160,U52163.1:7..41,U52164.1:7..211,125..2613)
FT                   /product="tumor necrosis factor receptor"
FT   CDS             join(U52156.1:90..167,U52157.1:7..106,U52158.1:114..242,
FT                   U52159.1:7..156,U52160.1:7..100,U52161.1:95..330,
FT                   U52162.1:83..160,U52163.1:7..41,U52164.1:7..211,125..405)
FT                   /codon_start=1
FT                   /product="tumor necrosis factor receptor"
FT                   /db_xref="GOA:P20333"
FT                   /db_xref="HGNC:HGNC:11917"
FT                   /db_xref="InterPro:IPR001368"
FT                   /db_xref="InterPro:IPR020411"
FT                   /db_xref="PDB:1CA9"
FT                   /db_xref="PDB:3ALQ"
FT                   /db_xref="UniProtKB/Swiss-Prot:P20333"
FT                   /protein_id="AAC50622.1"
FT                   /translation="MAPVAVWAALAVGLELWAAAHALPAQVAFTPYAPEPGSTCRLREY
FT                   YDQTAQMCCSKCSPGQHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSDQ
FT                   VETQACTREQNRICTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKP
FT                   CAPGTFSNTTSSTDICRPHQICNVVAIPGNASMDAVCTSTSPTRSMAPGAVHLPQPVST
FT                   RSQHTQPTPEPSTAPSTSFLLPMGPSPPAEGSTGDFALPVGLIVGVTALGLLIIGVVNC
FT                   VIMTQVKKKPLCLQREAKVPHLPADKARGTQGPEQQHLLITAPSSSSSSLESSASALDR
FT                   RAPTRNQPQAPGVEASGAGEARASTGSSDSSPGGHGTQVNVTCIVNVCSSSDHSSQCSS
FT                   QASSTMGDTDSSPSESPKDEQVPFSKEECAFRSQLETPETLLGSTEEKPLPLGVPDAGM
FT                   KPS"
FT   exon            125..2613
FT                   /gene="TNFR2"
FT                   /number=10
XX
SQ   Sequence 2613 BP; 553 A; 750 C; 742 G; 568 T; 0 other;
     tcttggtctc ggctcctggc ccagtgctct ttcccatgtg tctgaatctg catcttgggc        60
     aggggtccct gggccccact cctggacccc cggactgacc cccaccccat cttgtgctta       120
     gcagattctt cccctggtgg ccatgggacc caggtcaatg tcacctgcat cgtgaacgtc       180
     tgtagcagct ctgaccacag ctcacagtgc tcctcccaag ccagctccac aatgggagac       240
     acagattcca gcccctcgga gtccccgaag gacgagcagg tccccttctc caaggaggaa       300
     tgtgcctttc ggtcacagct ggagacgcca gagaccctgc tggggagcac cgaagagaag       360
     cccctgcccc ttggagtgcc tgatgctggg atgaagccca gttaaccagg ccggtgtggg       420
     ctgtgtcgta gccaaggtgg gctgagccct ggcaggatga ccctgcgaag gggccctggt       480
     ccttccaggc ccccaccact aggactctga ggctctttct gggccaagtt cctctagtgc       540
     cctccacagc cgcagcctcc ctctgacctg caggccaaga gcagaggcag cgagttgggg       600
     aaagcctctg ctgccatggt gtgtccctct cggaaggctg gctgggcatg gacgttcggg       660
     gcatgctggg gcaagtccct gactctctgt gacctgcccc gcccagctgc acctgccagc       720
     ctggcttctg gagcccttgg gttttttgtt tgtttgtttg tttgtttgtt tgtttctccc       780
     cctgggctct gcccagctct ggcttccaga aaaccccagc atccttttct gcagaggggc       840
     tttctggaga ggagggatgc tgcctgagtc acccatgaag acaggacagt gcttcagcct       900
     gaggctgaga ctgcgggatg gtcctggggc tctgtgtagg gaggaggtgg cagccctgta       960
     gggaacgggg tccttcaagt tagctcagga ggcttggaaa gcatcacctc aggccaggtg      1020
     cagtggctca cgcctatgat cccagcactt tgggaggctg aggcgggtgg atcacctgag      1080
     gttaggagtt cgagaccagc ctggccaaca tggtaaaacc ccatctctac taaaaataca      1140
     gaaattagcc gggcgtggtg gcgggcacct atagtcccag ctactcagaa gcctgaggct      1200
     gggaaatcgt ttgaacccgg gaagcggagg ttgcagggag ccgagatcac gccactgcac      1260
     tccagcctgg gcgacagagc gagagtctgt ctcaaaagaa aaaaaaaaaa gcaccgcctc      1320
     caaatgctaa cttgtccttt tgtaccatgg tgtgaaagtc agatgcccag agggcccagg      1380
     caggccacca tattcagtgc tgtggcctgg gcaagataac gcacttctaa ctagaaatct      1440
     gccaattttt taaaaaagta agtaccactc aggccaacaa gccaacgaca aagccaaact      1500
     ctgccagcca catccaaccc cccacctgcc atttgcaccc tccgccttca ctccggtgtg      1560
     cctgcagccc cgcgcctcct tccttgctgt cctaggccac accatctcct ttcagggaat      1620
     ttcaggaact agagatgact gagtcctcgt agccatctct ctactcctac ctcagcctag      1680
     accctcctcc tcccccagag gggtgggttc ctcttcccca ctccccacct tcaattcctg      1740
     ggccccaaac gggctgccct gccactttgg tacatggcca gtgtgatccc aagtgccagt      1800
     cttgtgtctg cgtctgtgtt gcgtgtcgtg ggtgtgtgta gccaaggtcg gtaagttgaa      1860
     tggcctgcct tgaagccact gaagctggga ttcctcccca ttagagtcag ccttccccct      1920
     cccagggcca gggccctgca gaggggaaac cagtgtagcc ttgcccggat tctgggagga      1980
     agcaggttga ggggctcctg gaaaggctca gtctcaggag catggggata aaggagaagg      2040
     catgaaattg tctagcagag caggggcagg gtgataaatt gttgataaat tccactggac      2100
     ttgagcttgg cagctgaact attggagggt gggagagccc agccattacc atggagacaa      2160
     gaagggtttt ccaccctgga atcaagatgt cagactggct ggctgcagtg acgtgcacct      2220
     gtactcagga ggctgagggg aggatcactg gagcccagga gtttgaggct gcagcgagct      2280
     atgatcgcgc cactacactc cagcctgagc aacagagtga gaccctgtct cttaaagaaa      2340
     aaaaaagtca gactgctggg actggccagg tttctgccca cattggaccc acatgaggac      2400
     atgatggagc gcacctgccc cctggtggac agtcctggga gaacctcagg cttccttggc      2460
     atcacagggc agagccggga agcgatgaat ttggagactc tgtggggcct tggttccctt      2520
     gtgtgtgtgt gttgatccca agacaatgaa agtttgcact gtatgctgga cggcattcct      2580
     gcttatcaat aaacctgttt gttttaaaaa aaa                                   2613
//


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