Dbfetch
ID AH005859; SV 2; linear; genomic DNA; STD; HUM; 7318 BP.
XX
AC AH005859; U46896-U46901;
XX
DT 13-JUN-2016 (Rel. 129, Created)
DT 13-JUN-2016 (Rel. 129, Last updated, Version 1)
XX
DE Homo sapiens chromosome 4 NACP/alpha-synuclein (NACP) gene, complete cds.
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-7318
RA Xia Y., Silva R.D., Chen X.H., Saitoh T.;
RT ;
RL Submitted (22-JAN-1996) to the INSDC.
RL Tsunao Saitoh, Neurosciences, UCSD, 9500. Gilman Dr, La Jolla, CA
RL 92093-0624, USA
XX
RN [2]
RC Sequence update by submitter
RP 1-7318
RA Xia Y., Silva R.D., Chen X.H., Saitoh T.;
RT ;
RL Submitted (13-JAN-1998) to the INSDC.
RL Tsunao Saitoh, Neurosciences, UCSD, 9500. Gilman Dr, La Jolla, CA
RL 92093-0624, USA
XX
DR MD5; 10c354189b6ffdf837fef51c9a342a48.
XX
CC On or before Jun 10, 2016 this sequence version replaced
CC gi:2769657, gi:1230569, gi:1230570, gi:1230571, gi:1230572,
CC gi:1230573, gi:2769658.
XX
FH Key Location/Qualifiers
FH
FT source 1..7318
FT /organism="Homo sapiens"
FT /chromosome="4"
FT /map="4q21.3-q22"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT gene 1..7251
FT /gene="NACP"
FT misc_feature 1..2700
FT /gene="NACP"
FT /note="5' flanking region"
FT mRNA join(2701..3078,3524..3669,4456..4497,5006..5148,
FT 5632..5715,6143..7251)
FT /gene="NACP"
FT /note="isoform B; transcription start site (2701) was
FT identified by 5'-RACE"
FT mRNA join(2701..2859,3524..3669,4456..4497,5006..5148,
FT 5632..5715,6143..7251)
FT /gene="NACP"
FT /note="isoform A; The 6 bp sequence in 5'-terminal of cDNA
FT isoform A does not match with genomic sequence;
FT transcription start site (2701) was identified by 5'-RACE"
FT exon 2701..3078
FT /gene="NACP"
FT /note="1'"
FT exon 2701..2859
FT /gene="NACP"
FT /number=1
FT intron 2860..3016
FT /gene="NACP"
FT /number=1
FT intron 3079..>3319
FT /gene="NACP"
FT /number=1
FT gap 3320..3419
FT /estimated_length=unknown
FT intron <3420..3523
FT /gene="NACP"
FT /number=1
FT exon 3524..3669
FT /gene="NACP"
FT /number=2
FT CDS join(3549..3669,4456..4497,5006..5148,5632..5715,
FT 6143..6175)
FT /codon_start=1
FT /gene="NACP"
FT /product="NACP/alpha-synuclein"
FT /protein_id="AAC02114.1"
FT /translation="MDVFMXGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTK
FT EGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAXTGFVKKDQLGKNE
FT EGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA"
FT intron 3670..>3955
FT /gene="NACP"
FT /number=2
FT gap 3956..4055
FT /estimated_length=unknown
FT intron <4056..4455
FT /gene="NACP"
FT /number=2
FT exon 4456..4497
FT /gene="NACP"
FT /number=3
FT intron 4498..>4705
FT /gene="NACP"
FT /number=3
FT gap 4706..4805
FT /estimated_length=unknown
FT intron <4806..5005
FT /gene="NACP"
FT /number=3
FT exon 5006..5148
FT /gene="NACP"
FT /number=4
FT intron 5149..>5308
FT /gene="NACP"
FT /number=4
FT gap 5309..5408
FT /estimated_length=unknown
FT intron <5409..5631
FT /gene="NACP"
FT /number=4
FT exon 5632..5715
FT /gene="NACP"
FT /number=5
FT intron 5716..>6021
FT /gene="NACP"
FT /number=5
FT gap 6022..6121
FT /estimated_length=unknown
FT intron <6122..6142
FT /gene="NACP"
FT /number=5
FT exon 6143..7251
FT /gene="NACP"
FT /number=6
FT intron 7252..>7318
FT /number=6
XX
SQ Sequence 7318 BP; 1983 A; 1247 C; 1535 G; 2037 T; 516 other;
gagctcagtt tctctgtcta taaaagttac ataaaatgta attcgatctg cttgttatga 60
ctaaataaca tagtacatta gtcctttgcc aaaggactaa caaattacca aataaaagtt 120
tggcatcatg ttaaacgttt ataagaagtg caactgtcca gaaataattc tctcacattg 180
gtctgttgta atggagacct aaaatatctc attttattta cctctttgca cttaaagcac 240
taggtctcaa gggagggtca tggttatact ataaatatgt catgtgaaat aatatattaa 300
ataattgttg taatactcta ttgagatact agttgtaaag aggcacaatg gaaaacttat 360
actattaaca gtagtaaaaa gaaacaacaa aaagcaataa aaaacaaaac acccattcat 420
gcaacgacat gaacgaacct cacaaatatt atactgagta aaagaagtca gacaaatata 480
aaacaagttt atactacgtg attagatctt tatgacattc tagatatgca catgaaggta 540
caaggtaact gtctggaatg atgaaaatgt cctgtgtctt caaaatagtg tgggttacac 600
taatgcatgg ctttttcaaa actgatttaa agggacacaa catctgagca tttccctagg 660
tgtaaattac actgcaattt taaagaatca tctaatgata ttgtggttat ttttaaacag 720
tccttaaatt ttgtggatgc atactgaatg tttacagctg aaagatatat ataaagcttg 780
aatttggtaa aaaaaaaaaa aaaagaggga ggattggtag tgataaagtg agtggattta 840
tggatgagac atgatcagcc atgcattgaa aaaatgtaaa agttggatga tcttcacatg 900
agagtccttt attctgtcta cttttgcata tgtttcgaat atttcccata acaaaaagtt 960
gaaaatagag tgatcacatg agttaatctc ctaatttaca aaaaagaaaa ctggaaacag 1020
aaggagaaca aaacttgttc aaggtctcaa agccagacag caaactagct cccaagtcca 1080
accttcttgc tctggtccta agcaaacaaa aaatattaat atgagctact gcattaagga 1140
aagtctgctt ttccaaaggg cagaccaata gttcaaggaa gagtttaaat aataaatatt 1200
tgtgatctta ctttcatgct tttctatttt ccactgaaca catatgcatt atcttctata 1260
tgtcttttat gtataatcat ttgcttcctg ttccttgtgg ttttaaagtt gttttgtatg 1320
tttaaatttg attttactca aatttcagaa cccaaattac gcgaagaatc agacaaagca 1380
taactttcta taaatataaa aacaattaaa aaaaaaacat acagcaaaaa cgagttgttg 1440
tttcccccct cctcttccag tgcttaacta atcttccgaa tccaggcaca gaaagcaaag 1500
gctttctgct agtgggagga gcttgcttct ccattctggt gtgatccaga acagctgtct 1560
tccagctctg aaagaggtga aaatgtgtta agcgatgcaa aaattgtctt gaagttcgcg 1620
tgtgtatgtc tgtgtgcatg tgcgtgtggt gggtgggggg agagaaaagg gggtgtcaat 1680
tctgagggca acgagaatca gaagtcagaa aggtgagtgg tgtgtagcat ctccctttca 1740
gaaggggctg aagaagaaat tggatatgat ggtccggtag gctaaatcac gctggatttg 1800
tctcccagat aaaggaggtc tgcaaagtaa gtcccatttc tagagcgaaa agccttagga 1860
ccgcttgttt tagacggctg gggaatattt attccttgtt ccactgatgg gaaaatcagc 1920
gtctggcagg cgctgattgg tggaaaggaa aatggtgata gtggcgtgga aagaggattt 1980
gctgagcctt ctcctgcctc ctcaacctgt gactcttcct tagtagtctc cctttcaccc 2040
tcagaaccct ttccggctct tcctagatta agagaaacga aaaccttgaa gaatatttga 2100
actaaagcga cccctaacgt tgtaacctgt gaccgtgatt aaatttcagc gatgcgaggg 2160
caaagcgctc tcggcggtgc ggtgtgagcc acctcccgcg ctgcctgtct cctccagcag 2220
ctccccaagg gatagctctg cccttggtgg tcgaccctca ggccctcggt ctcccagggc 2280
gactctgacg aggggtaggg ggtggtcccc gggaggaccc agaggaaagg cggggacaag 2340
aagggagggg aaggggaaag aggaagaggc atcatcccta gcccaaccgc tcccgatctc 2400
cacaagagtg ctcgtgaccc taaacttaac gtgaggcgca aaagcgcccc aaccttttcc 2460
cgccttgggc caggcaggcg gctggagttg atggctcacc ccgcgccccc tgccccatcc 2520
ccatccgaga tagggacgag gagcacgctg cagggaaagc agcgagcgcc gggagagggg 2580
cgggcagaag cgctgacaaa tcagcggtgg gggcggagag ccgaggagaa ggagaaggag 2640
gaggactagg aggaggagga cggcgacgac cagaaggggc ccaagagagg gggcgagcga 2700
ccgagcgccg acgcggaagt gaggtgcgtg cgggctgcag cgcagacccc ggcccggccc 2760
ctccgagagc gtcctgggcg ctccctcacg ccttgccttc aagccttctg cctttccacc 2820
ctcgtgagcg gagaactggg agtggccatt cgacgacagg ttagcgggtt tgcctcccac 2880
tcccccagcc tcgcgtcgcc ggctcacagc ggcctcctct ggggacagtc ccccccgggt 2940
gccgcctccg cccttcctgt gcgctccttt tccttcttct ttcctattaa atattatttg 3000
ggaattgttt aaattttttt tttaaaaaaa gagagaggcg gggaggagtc ggagttgtgg 3060
agaagcagag ggactcaggt aagtacctgt ggatctaaac gggcgtcttt gaaatcctga 3120
gaacgccgga tgggagacga atggtcgtgg gcaccgggag ggggtggtgc tgccatgagg 3180
accgctgggc caggtctctg ggaggtgagt acttgtcctt tggggagcct aaggaaagag 3240
acttgacctg gctttcgtcc tgcttctgat attcccttct ccacaagggc tgagaggtta 3300
ggctgcttct ccgggatccn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 3360
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnc 3420
ttaaaagagt ctcacacttt ggagggtttc tcatgatttt tcagtgtttt ttgtttattt 3480
ttccccgaaa gttctcattc aaagtgtatt ttatgttttc cagtgtggtg taaagaaatt 3540
cattagccat ggatgtattc atgnaaggac tttcaaaggc caaggaggga gttgtggctg 3600
ctgctgagaa aaccaaacag ggtgtggcag aagcagcagg aaagacaaaa gagggtgttc 3660
tctatgtagg taggtaaacc ccaaatgtca gtttggtgct tgttcatgag tgatgggtta 3720
ggataacaat actctaaatg ctggtagttc tctctcttga ttcatttttg catcattgct 3780
tgtcaaaaag gtggactgag tcagaggtat gtgtaggtag gtgaatgtga acgtgtgtat 3840
ntgagctaat agtaaaaatg cgactgtttg cttttcagat ttttaatttt gcctaatatn 3900
tatgacttnt taaaatgaat gtttctgtac tacataattc tatntcagag acagtnnnnn 3960
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4020
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnctgca ggtcaacgga tctgtctcta 4080
gtgctgtact tttaaagctt ctacagttct gaattcaaaa ttatcttctc actgggcccc 4140
ggtgttatct cattcttttt tctcctctgt aagttgacat gtgatgtggg aacaaagggg 4200
ataaagtcat tattttgtgc taaaatcgta attggagagg acctcctgtt agctgggctt 4260
tcttctatnt attgtggtgg ttaggagttc cttcttctag ttttaggata tatatatata 4320
tttttttctt tccctgaaga tataataata tatatacttc tgaagattga gatttttaaa 4380
ttagttgtat tgaaaactag ctaatcagca atttaaggct agcttgagac ttatgtcttg 4440
aatttgtttt tgtaggctcc aaaaccaagg agggagtggt gcatggtgtg gcaacaggta 4500
agctccattg tgcttatatc aaagatgata tntaaagtat ctagtgatta gtgtggccca 4560
gtatcaagat tcctatgaaa ttgtaaaaca atcactgagc atctaagaac atatcagtct 4620
tattgaaact gaattcttta taaagtattt ttaaataggt aaatattgat tataaataaa 4680
aaatatactt gccaagaata atgagnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4740
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 4800
nnnnnatatc ttagccaaga ttcaatgttt ggttgaacca cactcacttg acatcttggt 4860
ggcttttgtt tcttctgacc actcagttat ctatggcatg tgtagataca ggtgtatgga 4920
ancgatggct agtggaagtg gaatgatttt aagtcactgt tattctacca ccctttaatc 4980
tgttgttgct ctttatttgt accagtggct gagaagacca aagagcaagt gacaaatgtt 5040
ggaggagcag tggtgacggg tgtgacagca gtagcccaga agacagtgga gggagcaggg 5100
agcattgcag canccactgg ctttgtcaaa aaggaccagt tgggnaaggt atggctgtgt 5160
acgttttgtg ttacatttat aagctggtga gattacggtt cattttcatg tgaanctgga 5220
ggcaggagca agatacttac tgtggggaac ggctacctga ccctcccctt gtgaaaaagt 5280
gctaccttta tattggtctt gcttgtttnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 5340
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 5400
nnnnnnnnaa aagtttacat actttgaggt tgataaccca tgttgccgca atgtttcccc 5460
ggaggcattg tggagtttag aatgccagta gtaatattaa ggtgtgccat tttcaagatc 5520
cgtggccaac atccctatat gtaagatttt tccaaaacat ggttctgatt tttaaaagtg 5580
aaaaatgcta cttcatcatg ttctttttgt gcttcttact ttaaatatta gaatgaagaa 5640
ggagccccac aggaaggaat tctggaagat atgcctgtgg atcctgacaa tgaggcttat 5700
gaaatgcctt ctgaggtagg agtccaagct gaatctttct aacaagacag taccaaaaac 5760
ctgtcattgt cacatttctc tttcattagt gcttagtgag aatcatttgc tctctacatg 5820
ctcattacgt ggacaacttg caagttaaga atagttttta catttttaaa gggtccttaa 5880
aaaaaaagag gaggaggaag atgaagaaga ggaagaaagg atgtaaaaga aatcatatgt 5940
agtccacata gcttaatata cntactactt gaccctttac aggaaaagct ttactaaccc 6000
ctgcattaga gaatatattt tnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 6060
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 6120
nttttgattt ttctaatatt aggaagggta tcaagactac gaacctgaag cctaagaaat 6180
atctttgctc ccagtttctt gagatctgct gacagatgtt ccatcctgta caagtgctca 6240
gttccaatgt gcccagtcat gacatttctc aaagttttta cagtgtatct cgaagtcttc 6300
catcagcagt gattgaagca tctgtacctg cccccactca gcatttcggt gcttcccttt 6360
cactgaagtg aatacatggt agcagggtct ttgtgtgctg tggattttgt ggcttcaatc 6420
tacgatgtta aaacaaatta aaaacaccta agtgactacc acttatttct aaatcctcac 6480
tatttttttg ttgctgttgt tcagaagttg ttagtgattt gctatcatat attatnagat 6540
ttttaggtgt cttttaatga tactgtctaa gaataatgac gtattgtgaa atttgttaat 6600
atatatnata cttaaaaata tgtgagcatg aaactatgca cctataatac taaatatgaa 6660
attttaccat tttgcgatgt gttttattca cttgtgtttg tatatnaatg gtgagaatta 6720
aaataaaacg ttatctcatt gcaaaaatat tttattttta tcccatctca ctttaataat 6780
aaaaatcatg cttataagca acatgaatta agaactgaca caaaggacaa aaatataaag 6840
ttattaatag ccatttgaag aaggaggaat tttagaagag gtagagaaaa tggaacatta 6900
accctacact cggaattccc tgaagcaaca ctgccagaag tgtgttttgg tatgcactgg 6960
ttccttaagt ggctgtgatt aattattgaa agtggggtgt tgaagacccc aactactatt 7020
gtagagtggt ctatttctcc cttcaatcct gtcaatgttt gctttacgta ttttggggaa 7080
ctgttgtttg atgtgtatgt gtttataatt gttatacatt tttaattgag ccttttatta 7140
acatatattg ttatttttgt ctcgaaataa ttttttagtt aaaatctatt ttgtctgata 7200
ttggtgtgaa tgctgtacct ttctgacaat aaataatatn cgaccatgaa taaaaaaaaa 7260
aaaaaagtgg gttcccggga actaagcagt gtagaagatg attttgacta caccctcc 7318
//
