Dbfetch

ID   JN157608; SV 1; linear; genomic DNA; STD; HUM; 5376 BP.
XX
AC   JN157608;
XX
DT   18-DEC-2011 (Rel. 111, Created)
DT   18-DEC-2011 (Rel. 111, Last updated, Version 1)
XX
DE   Homo sapiens MHC class II antigen (HLA-DRB1) gene,
DE   HLA-DRB1-DRB1*03:01:01:01v allele, partial cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-5376
RA   Xu Y., Deng Z., Yang B.;
RT   "Characterization and polymorphism analyses of HLA-DRB1 genomic full length
RT   in Chinese Han population";
RL   Unpublished.
XX
RN   [2]
RP   1-5376
RA   Xu Y., Deng Z., Yang B.;
RT   ;
RL   Submitted (18-JUN-2011) to the INSDC.
RL   Immunogenetic Laboratory, Shenzhen Blood Center, 2# Meigang South Street,
RL   Nigang West Road, Shenzhen, Guangdong 518035, China
XX
DR   MD5; 70bc11206af36f1f60268d432080bffa.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..5376
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /PCR_primers="fwd_seq: cagctcctgcytggaggtctc, rev_seq:
FT                   ggtttaggcaaaggggagcac"
FT                   /db_xref="taxon:9606"
FT   gene            <1..5376
FT                   /gene="HLA-DRB1"
FT                   /allele="DRB1*03:01:01:01v"
FT   mRNA            join(<260..529,2764..3045,3744..3854,4330..4353,5142..5376)
FT                   /gene="HLA-DRB1"
FT                   /allele="DRB1*03:01:01:01v"
FT                   /product="MHC class II antigen"
FT   CDS             join(<260..529,2764..3045,3744..3854,4330..4353,5142..5155)
FT                   /codon_start=3
FT                   /gene="HLA-DRB1"
FT                   /allele="DRB1*03:01:01:01v"
FT                   /product="MHC class II antigen"
FT                   /db_xref="GOA:G9FJH9"
FT                   /db_xref="InterPro:IPR000353"
FT                   /db_xref="InterPro:IPR003006"
FT                   /db_xref="InterPro:IPR003597"
FT                   /db_xref="InterPro:IPR007110"
FT                   /db_xref="InterPro:IPR011162"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR014745"
FT                   /db_xref="UniProtKB/TrEMBL:G9FJH9"
FT                   /protein_id="AEV76925.1"
FT                   /translation="RFLEYSTSECHFFNGTERVRYLDRYFHNQEENVRFDSDVGEFRAV
FT                   TELGRPDAEYWNSQKDLLEQKRGRVDNYCRHNYGVVESFTVQRRVHPKVTVYPSKTQPL
FT                   QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSG
FT                   EVYTCQVEHPSVTSPLTVEWRARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGH
FT                   SGLQPRGFLS"
FT   3'UTR           5156..5376
FT                   /gene="HLA-DRB1"
FT                   /allele="DRB1*03:01:01:01v"
XX
SQ   Sequence 5376 BP; 1331 A; 1124 C; 1334 G; 1587 T; 0 other;
     cagaacaggc tggaggtagg gaggggggtc ccaaaagcct ggggatcaga cgtggttttc        60
     ccgcctggtc ccccaggccc cctttcgcct caggaagaca gaggaggagc ccctgggctg       120
     ctggtggtgg gcgttgcggc gggggccggt taaggttccc agtgcccgca ccccacccag       180
     ggagccccgg atggcggcgt cactgtcagt gtcttctcag gaggccgcct gtgtgactgg       240
     atcgttcgtg tccccacagc acgtttcttg gagtactcta cgtctgagtg tcatttcttc       300
     aatgggacgg agcgggtgcg gtacctggac agatacttcc ataaccagga ggagaacgtg       360
     cgcttcgaca gcgacgtggg ggagttccgg gcggtgacgg agctggggcg gcctgatgcc       420
     gagtactgga acagccagaa ggacctcctg gagcagaagc ggggccgggt ggacaactac       480
     tgcagacaca actacggggt tgtggagagc ttcacagtgc agcggcgagg tgagcgcggc       540
     gcggggcggg gcctgagtcc ctgtgagctg ggaatctgag tgtgtgtgtg tgtgtgtgtg       600
     tgtgtgtgtg tgtgtgtgag agagagagac agagagacag agagagagag cgccatctgt       660
     gagcatttag aatcctctct atcctgagca aggagttctg agggcacagg tgtgtgtgta       720
     gagtgtggat ttgtctgtgt ctgtgaggct gttgtgggag gggaggcagg agggggctgc       780
     ttcttattct tggaggactc tgtggggagg tgacaaggga ggtgggtgcg ggcggctgga       840
     gagagaggtg accttgattg tctcgggtcc ttagagatgc agggaaggga aatgtaaggg       900
     gtgtgtggtt ggggtgaagg tttaggggag gagagctgag gggtaaggaa ggtttgggat       960
     aatgtgagga ggccagttcc agactgtccc tggcacacac ccttcatgta atctctgaaa      1020
     taaaagtgtg tgctgtttgt ttgtaaaagc attagattaa tttctagggg aattgaggag      1080
     acctctgagg catctctgaa gcttctttag gtctaaattt cttgctagtt ttttgttttt      1140
     tattgtgtat atttttacat agtagaaatg actgtgaaac taactttttg aattaaagtt      1200
     ttaacacagt tactatttta ttataatgct aatagttttc tagtagttac atattattct      1260
     tttatatata atagttgtga cacaacttac ctcactttcc actttgttga cctttattat      1320
     gacattcacc aaaatttgaa aatgtatgtt tctggttaat ttttaattta tatttttttc      1380
     atttataatt cttttgaatt attttgacct atttattggc cagttttaat aactgctgta      1440
     agaattccct attgtatttg gtagggaatg gacaatgatc tactgcctaa tatctcgagg      1500
     gcttagtatt tttctcagtg actttgtggg ttctttgtac tgtgagatta ttaacacttt      1560
     attgatattt gattcagcat ttgctccagt ttgtggtttg tatgttgatt ttgaaaattc      1620
     ttttccatgt taagaatttg aacattttta tataataaaa tatgttgcaa aatttttatt      1680
     aatgatttac aatccatctt aaatctgcca ttttgtggta ttgttgtctc caggtttctc      1740
     cttacttcta aaaaaaattg catttattga gagtctgcta gtgttaggga ttttcctggg      1800
     cataagcacc ccaagtgacg agtcccagac actgccttaa tccaaatgtg attctggaaa      1860
     gaaaaatcat tttacaatga taggcctaat aataattaag cttgtgttgc atgggagatg      1920
     cattgatcag ctaaatgtaa atataagaac tttcaaaact aaaatgacgt tccttaatcc      1980
     ttctctctgc tttatgactc atgcttttct gggaaagtaa aaatttggag aatcatttct      2040
     gtctgtccca ccttcccagg ggcagaacca tttctgtggt gttctaaggt gtgagtgcat      2100
     ggcggtagta ttcctaaaaa ttcatattcg gtttcgtcat gtacccaact ctgtcccgtt      2160
     atctatcaac attgttttaa atcatatatt tctgtcaagg tgtacaagga tgataaatag      2220
     gtgccaagtg gagcacccaa gtgtgatgag ccccctcaca gtggaatgga gtgtgaagct      2280
     ttatgacctc ataaattgaa ggttatcttc aggcattgtt ttatatattt tacatgcatt      2340
     aatcctcata taatcccaag aggtaaatta gtataattat ccttcattat aggtgacaaa      2400
     gttgagacac agaagaatca aactcttaag gcagaccttg gatttgaacc aggcaacctg      2460
     gctcagatat cagttttaat tactacactc tgtactttca aagatttgta aacactttga      2520
     caatgcatga caatttcaag ctatgaagaa acaaacacaa tttttcacaa tatctctcaa      2580
     atctaatagg tcctcactat caagattaag ttccaggctg atgacactgt aaggccacat      2640
     ggccagctgt gctggaggcc tggtcaaggt cagagcctgg gtttgcagag aagcagacaa      2700
     acagccaaac aaggagactt actctgtctt catgactcat tccctctacc ttttttctcc      2760
     tagtccatcc taaggtgact gtgtatcctt caaagaccca gcccctgcag caccataacc      2820
     tcctggtctg ttctgtgagt ggtttctatc caggcagcat tgaagtcagg tggttccgga      2880
     atggccagga agagaagact ggggtggtgt ccacaggcct gatccacaat ggagactgga      2940
     ccttccagac cctggtgatg ctggaaacag ttcctcggag tggagaggtt tacacctgcc      3000
     aagtggagca cccaagcgtg acaagccctc tcacagtgga atggagtgag cagctttctg      3060
     acttcataaa tttctcaccc accaagaagg ggactgtgct catccctgag tgtcaggttt      3120
     ctcctctccg acatcctatt ttcatttgct ccatgttctc atctccatca gcacaggtca      3180
     ctgggggtag ccctgtaggt gtttctagaa acacctgtac ctcctggaga agcagtctcg      3240
     cctgccaggc aggagaggct gtccctcttt tgaacctccc catgatgtca caggtcaggg      3300
     tcacccaccc tccccgggct ccaggcactg cctctgggtc tgagactgag tttctggtgc      3360
     tgttgatctg agttatttgt tgtgatctgg gaagaggaga agtgtagggg ccttcctgac      3420
     atgaggggag tccaatctca gctctgcctt ttattagctc tgtcactcta gacaaactac      3480
     ttagcctcat tgagtctcag gctttctgtg gatcagatgt tgaactcttg ccttacatca      3540
     aggctgtaat atttgaatga gtttgatgtc tgaaccttgt aactgttcag tgtgatttga      3600
     aatccttttt ttctccagaa atggctagtt attttagttc ttgtgggtca gacttcttcc      3660
     ccattttcaa agctctgaat cttagagtct caattaaaga ggttcaattt ggaataaaca      3720
     ctaaacctgg cttcctctct caggagcacg gtctgaatct gcacagagca agatgctgag      3780
     tggagtcggg ggctttgtgc tgggcctgct cttccttggg gccgggctgt tcatctactt      3840
     caggaatcag aaaggtgagg agcctttggt agctggctct ctccataggc ttttctggag      3900
     gaggaactat ggctttgctg aggttagttc tcagtatatg agtggccctg aataaagcct      3960
     ttctttcccc aaacggctct aatgtcctgc taatccagaa atcatcagtg catggttact      4020
     atgtgaaagc ataatagctt gtggcctgca gagacaagag gaaggttaac aagtaggggt      4080
     cctttggttt gagatcttgg agcagattaa ggaagagcca ctaagactaa tggaattaca      4140
     ctggatcctg tgacagacac tttacccttc atgggtcaca tggtctgttt ctgctcctct      4200
     ctgccctggc tggtgtgggt tgtagtgaca gagaactctc cggtgggaga tctggggctg      4260
     ggacattgtg ttggaagaca gatttgcttc cataaatttt aagtgtatat attttcctct      4320
     ttttcccagg acactctgga cttcagccaa gaggtaatac cttttaatcc tcttttagaa      4380
     acagatacgg tttccctagt gagaggtgaa gccagctgga cttctgggtc gggtagggac      4440
     ttgcagaact ttcctgtctt aggagaggtt tctaaatgca ccaatcagtg ctctgtaaaa      4500
     acacaccaat tggcactctg tggctagata gatgtttgta aaatggacta atcagcactc      4560
     tgtaaaatgg agcaatccac actctgtaaa atggaccaat caatgctctt taaaatggac      4620
     caatcagcag gacatgggcg gggacaaata agggaataca agctggccac cccagccagc      4680
     agcagcaacc cgctcaggtc gccttccatg ctgtggaagc tttgttcttt tgctcttcac      4740
     aataaatctt gctgttgctc actcttcggg tctgtgccac ctttaagagc tgtaacactc      4800
     actgtgaaga ttcgcggctt cattcttgaa gtcagcgaaa ccacgaaccc accggaagga      4860
     acaaactctg gacacactag aattgatggt agaggtgata aggcatgaga cagaaataat      4920
     aggaaagact ttggatccaa atttctgatc aggcaattta caccaaaact cctcctctcc      4980
     acttagaaaa ggcctgtgct ctgtgggact attggctctg ggagactcag gaacttgttt      5040
     ttcttcttcc tgcagtgctc tcatctgagt ccctgaaaga gaggaaaaga aactgttagt      5100
     agagtcaggt tgaaaacaac actctcctct gtcttttgca ggattcctga gctgaagtgc      5160
     agatgacaca ttcaaagaag aactttctgc cccagctttg caggatgaaa agctttccct      5220
     cctggctgtt attcttccac aagagagggc tttctcagga cctggttgct actggttcag      5280
     caactgcaga aaatgtcctc ccttgtggct tcctcagctc ctgttcttgg cctgaagccc      5340
     cacagctttg atggcagtgc ctcatcttca actttt                                5376
//