ID FM196526; SV 1; linear; genomic DNA; STD; HUM; 652 BP.
XX
AC FM196526;
XX
DT 30-JUL-2008 (Rel. 96, Created)
DT 30-JUL-2008 (Rel. 96, Last updated, Version 1)
XX
DE Homo sapiens partial HLA-DRB1 gene for MHC class II antigen, HLA-DRB1*13new
DE allele, exons 2-3
XX
KW .
XX
OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-652
RA Enczmann J.;
RT ;
RL Submitted (16-JUL-2008) to the INSDC.
RL Enczmann J., ITZ, University Clinic Duesseldorf, Moorenstrasse 5, 40225
RL Duesseldorf, NRW, GERMANY.
XX
RN [2]
RA Ogrzewalla K., Tillmann G., Scheibelhut N., Lauber J., Enczmann J.;
RT "A novel HLA-DRB1*13 allele identified by sequence-based typing";
RL Unpublished.
XX
DR MD5; 9e43be1291e384a96d4d03ba714dd231.
DR IMGT/HLA; HLA-DRB1*13:87; HLA03447.
XX
FH Key Location/Qualifiers
FH
FT source 1..652
FT /organism="Homo sapiens"
FT /chromosome="6"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:9606"
FT mRNA join(<1..270,371..>652)
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*13new"
FT CDS join(<1..270,371..>652)
FT /codon_start=3
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*13new"
FT /product="MHC class II antigen"
FT /function="antigen presenting molecule"
FT /db_xref="GOA:Q5Y7A7"
FT /db_xref="HGNC:HGNC:4948"
FT /db_xref="InterPro:IPR000353"
FT /db_xref="InterPro:IPR003006"
FT /db_xref="InterPro:IPR003597"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR011162"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR014745"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="UniProtKB/Swiss-Prot:Q5Y7A7"
FT /protein_id="CAQ86517.1"
FT /translation="RFLEYSTSECHFFNGTERVRFLDRYFHNQEEIVRFDSDVGEFRAV
FT TELGRPDAEYWNSQKDILEDERAAVDTYCRHNYGVVESFTVQRRVHPKVTVYPSKTQPL
FT QHHNLLVCSVSGFYPGSIEVRWFRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSG
FT EVYTCQVEHPSVTSPLTVEW"
FT exon <1..270
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*13new"
FT /number=2
FT gap 271..370
FT /estimated_length=unknown
FT exon 371..>652
FT /gene="HLA-DRB1"
FT /allele="HLA-DRB1*13new"
FT /number=3
XX
SQ Sequence 652 BP; 124 A; 140 C; 177 G; 111 T; 100 other;
cacgtttctt ggagtactct acgtctgagt gtcatttctt caatgggacg gagcgggtgc 60
ggttcctgga cagatacttc cataaccagg aggagatcgt gcgcttcgac agcgacgtgg 120
gggagttccg ggcggtgacg gagctggggc ggcctgatgc cgagtactgg aacagccaga 180
aggacatcct ggaagacgag cgggccgcgg tggacaccta ctgcagacac aactacgggg 240
ttgtggagag cttcacagtg cagcggcgag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn 360
nnnnnnnnnn tccatcctaa ggtgactgtg tatccttcaa agacccagcc cctgcagcac 420
cacaacctcc tggtctgttc tgtgagtggt ttctatccag gcagcattga agtcaggtgg 480
ttccggaatg gccaggaaga gaagactggg gtggtgtcca caggcctgat ccacaatgga 540
gactggacct tccagaccct ggtgatgctg gaaacagttc ctcggagtgg agaggtttac 600
acctgccaag tggagcaccc aagcgtgaca agccctctca cagtggaatg ga 652
//