Dbfetch
ID BC141340; SV 1; linear; mRNA; STD; MUS; 1844 BP. XX AC BC141340; XX DT 12-FEB-2009 (Rel. 99, Created) DT 12-FEB-2009 (Rel. 99, Last updated, Version 1) XX DE Mus musculus growth differentiation factor 6, mRNA (cDNA clone MGC:176301 DE IMAGE:9055952), complete cds. XX KW MGC. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-1844 RX DOI; 10.1073/pnas.242603899. RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1844 RG NIH MGC Project RA ; RT ; RL Submitted (03-MAY-2007) to the INSDC. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR MD5; cd99670d9ba71a67bd2a888c50c93e10. DR Ensembl-Gn; ENSMUSG00000051279; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0028043; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AJ_G0028001; mus_musculus_aj. DR Ensembl-Gn; MGP_AKRJ_G0027967; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0028013; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0027743; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0028456; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0027197; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0027718; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0027858; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0027825; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0027969; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0027858; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0028515; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0026918; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0027276; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000057613; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0064669; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AJ_T0064696; mus_musculus_aj. DR Ensembl-Tr; MGP_AKRJ_T0064638; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0064616; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0064306; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0065111; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0064625; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0064263; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0064377; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0064334; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0064520; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0064335; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0065326; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0064154; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0063562; mus_musculus_wsbeij. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Ambion CC cDNA Library Preparation: British Columbia Cancer Research Center CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson CC Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen CC Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel CC Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave CC Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR CC Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, CC Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: LLDM Plate: 682 Row: a Column: 6 CC single stranded. XX FH Key Location/Qualifiers FH FT source 1..1844 FT /organism="Mus musculus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_389" FT /clone="MGC:176301 IMAGE:9055952" FT /tissue_type="Brain,thymus,testicle,kidney,spleen,liver, FT heart,lung,ovary,embryo - PCR rescued clones" FT /note="Vector: pCR4-TOPO; Clone identification sequence FT tag: CCTAGACT" FT /db_xref="taxon:10090" FT gene 1..1844 FT /gene="Gdf6" FT /gene_synonym="GDF16" FT /gene_synonym="BMP13" FT CDS 21..1385 FT /codon_start=1 FT /gene="Gdf6" FT /gene_synonym="GDF16" FT /gene_synonym="BMP13" FT /product="growth differentiation factor 6" FT /db_xref="GOA:A2AII0" FT /db_xref="InterPro:IPR001111" FT /db_xref="InterPro:IPR001839" FT /db_xref="InterPro:IPR015615" FT /db_xref="InterPro:IPR017948" FT /db_xref="InterPro:IPR029034" FT /db_xref="MGI:MGI:95689" FT /db_xref="UniProtKB/TrEMBL:A2AII0" FT /protein_id="AAI41341.1" FT /translation="MDTPRVLLWAIFLISFLWDLPGFQQASISSSSSSSTELDSTKDVG FT NRKEGKMQRTPQESAEGRTPPEHGLRQKDLRRRPPGQHQGQEPPGRGLRVVPHEYMLSI FT YKTYSIAEKLGINASFFQSSKSANTITSFVDRGLDDLSHTPLRRQKYLFDVSTLSDKEE FT LVGAELRLYRQAPPTPWGLPARPLHLQLFPCLSPLLLDARTLDPQGPTQAGWEVFDVWQ FT GLRPQPWKQLCLELRAAWGELDAGDTGARARGPQQPPPLDLRSLGFGRRVRPPQERALL FT VVFTRSQRKNLFTEMHEQLGSAEAAGAEGSWPAPSGSPDAGSWLPSPGRRRRRTAFASR FT HGKRHGKKSRLRCSRKPLHVNFKELGWDDWIIAPLEYEAYHCEGVCDFPLRSHLEPTNH FT AIIQTLMNSMDPGSTPPSCCVPTKLTPISILYIDAGNNVVYKQYEDMVVESCGCR" XX SQ Sequence 1844 BP; 371 A; 536 C; 555 G; 382 T; 0 other; aacttagcca ctcgctcgcc atggacactc ctagggtcct tctctgggcg atcttcctca 60 ttagcttcct ctgggatttg ccgggtttcc agcaggcttc catctcctcg tcctcctcct 120 cctccaccga attggactcc accaaagacg tggggaaccg caaagaaggg aagatgcagc 180 gaactccaca agagagtgcc gagggccgga cgcccccgga gcacgggctg cggcagaagg 240 acctccggcg gcggccgccc ggacaacatc aggggcagga gccgccgggc agggggctgc 300 gcgtggtgcc tcacgagtac atgctgtcaa tctacaagac ttactccatt gccgagaagc 360 tgggcatcaa tgccagcttt ttccagtctt ccaagtcagc taatacgatc actagctttg 420 tagacagagg actggacgat ctctcgcaca ctcctctccg gagacagaag tatttgtttg 480 atgtgtccac actctcagac aaagaagagc tggtgggcgc agagctaagg ctttatcgcc 540 aggcgccccc aacgccctgg gggctaccgg cccgaccgct gcacttgcag ctcttccctt 600 gtttatcccc attgctactg gacgccagga ccctggatcc tcagggacca acccaggccg 660 gctgggaagt cttcgacgtg tggcagggcc tgcgccctca gccttggaag cagctgtgcc 720 tggagttgcg ggcagcctgg ggtgagctgg acgccgggga tacgggggcg cgcgcgaggg 780 gtccccagca gccaccgcct ctggacctgc ggagtctggg cttcggtcgg agggtgaggc 840 cgccccagga gcgcgccctg cttgtagtgt tcaccagatc gcagcgcaag aacctgttca 900 ctgagatgca tgagcagctg ggctctgcag aggctgcggg agccgagggg tcatggccag 960 cgccgtcggg ctccccagac gccgggtctt ggctgccctc gcccggccgc cggcggcgac 1020 gcaccgcctt cgccagccgt cacggcaagc gacatggcaa gaagtccagg ctgcgctgca 1080 gcagaaagcc tctgcacgtg aattttaagg agttaggctg ggacgactgg attatcgcgc 1140 ccctagagta cgaggcctat cactgcgagg gcgtgtgcga ctttccgctg cgctcgcacc 1200 ttgagcccac taaccatgcc atcattcaga cgctgatgaa ctccatggac ccgggctcca 1260 ccccgcctag ctgctgcgtt cccaccaaac tgactcccat tagcatcctg tacatcgacg 1320 cgggcaataa tgtagtctac aagcagtatg aggacatggt ggtggagtcc tgcggctgta 1380 ggtagcggtg ctgtcccgcc acctgggcca gggaccatgg agggaggcct gactgccgag 1440 aaaggagcag gagctggctt ggaagaggcc acaggtgggg gacagcctga aagtaggagc 1500 acagtaagaa gcagcccagc cttcccagaa ccttccaacc cccaacccag aagcagctaa 1560 gggtttcaca ctttgccttg ccagcctgga aagactagac aagaaggatt ctttctttta 1620 ttatggcttt ggttctttgt ttgttttgtt ttgttttatc tccttggttt tgataggacg 1680 tggaaggagg ggaaatgctt atctgttcac aagtgttctg tggattgggg gaggagggaa 1740 taagagaaat aacctattac ttttgtccgc atctcagatt ggttgtttct acctgtgtaa 1800 gaaagtgagg cctttgggtc tttctagcca agtctcagct ggcg 1844 //