Dbfetch
ID BC132431; SV 1; linear; mRNA; STD; MUS; 1307 BP. XX AC BC132431; XX DT 02-FEB-2007 (Rel. 90, Created) DT 07-DEC-2007 (Rel. 94, Last updated, Version 2) XX DE Mus musculus cerberus 1 homolog (Xenopus laevis), mRNA (cDNA clone DE MGC:164062 IMAGE:40130708), complete cds. XX KW MGC. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Mus; Mus. XX RN [1] RP 1-1307 RX DOI; 10.1073/pnas.242603899. RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1307 RG NIH MGC Project RA ; RT ; RL Submitted (31-JAN-2007) to the INSDC. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR MD5; d8680515eefe0fa46df11133430e2574. DR Ensembl-Gn; ENSMUSG00000038192; mus_musculus. DR Ensembl-Gn; MGP_129S1SvImJ_G0028400; mus_musculus_129s1svimj. DR Ensembl-Gn; MGP_AJ_G0028361; mus_musculus_aj. DR Ensembl-Gn; MGP_AKRJ_G0028310; mus_musculus_akrj. DR Ensembl-Gn; MGP_BALBcJ_G0028381; mus_musculus_balbcj. DR Ensembl-Gn; MGP_C3HHeJ_G0028096; mus_musculus_c3hhej. DR Ensembl-Gn; MGP_C57BL6NJ_G0028820; mus_musculus_c57bl6nj. DR Ensembl-Gn; MGP_CASTEiJ_G0027537; mus_musculus_casteij. DR Ensembl-Gn; MGP_CBAJ_G0028065; mus_musculus_cbaj. DR Ensembl-Gn; MGP_DBA2J_G0028214; mus_musculus_dba2j. DR Ensembl-Gn; MGP_FVBNJ_G0028180; mus_musculus_fvbnj. DR Ensembl-Gn; MGP_LPJ_G0028314; mus_musculus_lpj. DR Ensembl-Gn; MGP_NODShiLtJ_G0028209; mus_musculus_nodshiltj. DR Ensembl-Gn; MGP_NZOHlLtJ_G0028857; mus_musculus_nzohlltj. DR Ensembl-Gn; MGP_PWKPhJ_G0027260; mus_musculus_pwkphj. DR Ensembl-Gn; MGP_WSBEiJ_G0027613; mus_musculus_wsbeij. DR Ensembl-Tr; ENSMUST00000048430; mus_musculus. DR Ensembl-Tr; MGP_129S1SvImJ_T0066139; mus_musculus_129s1svimj. DR Ensembl-Tr; MGP_AJ_T0066197; mus_musculus_aj. DR Ensembl-Tr; MGP_AKRJ_T0066085; mus_musculus_akrj. DR Ensembl-Tr; MGP_BALBcJ_T0066117; mus_musculus_balbcj. DR Ensembl-Tr; MGP_C3HHeJ_T0065781; mus_musculus_c3hhej. DR Ensembl-Tr; MGP_C57BL6NJ_T0066592; mus_musculus_c57bl6nj. DR Ensembl-Tr; MGP_CASTEiJ_T0066138; mus_musculus_casteij. DR Ensembl-Tr; MGP_CBAJ_T0065730; mus_musculus_cbaj. DR Ensembl-Tr; MGP_DBA2J_T0065868; mus_musculus_dba2j. DR Ensembl-Tr; MGP_FVBNJ_T0065795; mus_musculus_fvbnj. DR Ensembl-Tr; MGP_LPJ_T0065971; mus_musculus_lpj. DR Ensembl-Tr; MGP_NODShiLtJ_T0065779; mus_musculus_nodshiltj. DR Ensembl-Tr; MGP_NZOHlLtJ_T0066776; mus_musculus_nzohlltj. DR Ensembl-Tr; MGP_PWKPhJ_T0065680; mus_musculus_pwkphj. DR Ensembl-Tr; MGP_WSBEiJ_T0064991; mus_musculus_wsbeij. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Ambion CC cDNA Library Preparation: British Columbia Cancer Research Center CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson CC Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen CC Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel CC Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave CC Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR CC Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, CC Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRCK Plate: 6 Row: G Column: 5. CC Differences found between this sequence and the mouse C57BL/6J CC genome (build 36) are described in misc_difference features below. XX FH Key Location/Qualifiers FH FT source 1..1307 FT /organism="Mus musculus" FT /lab_host="DH10B" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_389" FT /clone="MGC:164062 IMAGE:40130708" FT /tissue_type="Brain,thymus,testicle,kidney,spleen,liver, FT heart,lung,ovary,embryo - PCR rescued clones" FT /note="Vector: pCR4-TOPO; Clone identification sequence FT tag: TTCTCACG" FT /db_xref="taxon:10090" FT gene 1..1307 FT /gene="Cer1" FT /note="synonyms: cer-1, Cerl" FT CDS 52..870 FT /codon_start=1 FT /gene="Cer1" FT /product="cerberus 1 homolog (Xenopus laevis)" FT /db_xref="GOA:A2ADM9" FT /db_xref="InterPro:IPR004133" FT /db_xref="InterPro:IPR006207" FT /db_xref="InterPro:IPR016860" FT /db_xref="InterPro:IPR029034" FT /db_xref="MGI:MGI:1201414" FT /db_xref="UniProtKB/TrEMBL:A2ADM9" FT /protein_id="AAI32432.1" FT /translation="MHLLLVQLLVLLPLGKADLCVDGCQSQGSLSFPLLERGRRDLHVA FT NHEEAEDKPDLFVAVPHLMGTSLAGEGQRQRGKMLSRLGRFWKKPETEFYPPRDVESDH FT VSSGMQAVTQPADGRKVERSPLQEEAKRFWHRFMFRKGPAFQGVILPIKSHEVHWETCR FT TVPFNQTIAHEDCQKVVVQNNLCFGKCSSIRFPGEGADAHSFCSHCSPTKFTTVHLMLN FT CTSPTPVVKMVMQVEECQCMVKTERGEERLLLAGSQGSFIPGLPASKTNP" FT misc_difference 1294^1295 FT /gene="Cer1" FT /note="1 base in the mouse genome, G, is not found in FT cDNA." XX SQ Sequence 1307 BP; 330 A; 347 C; 306 G; 324 T; 0 other; ttaggcccgt ccatctgtga atctaacctc agtctctggg aatcaggaag catgcatctc 60 ctcttagttc agctgcttgt tctcttgcct ctggggaagg cagacctatg tgtggatggc 120 tgccagagtc agggctcttt atcctttcct ctcctagaaa ggggtcgcag agatctccac 180 gtggccaacc acgaggaggc agaagacaag ccggatctgt ttgtggccgt gccacacctc 240 atgggcacca gcctggctgg ggaaggccag aggcagagag ggaagatgct gtccaggctt 300 ggaagattct ggaagaaacc tgagaccgaa ttttaccccc caagggatgt ggaaagcgat 360 catgtctcat cggggatgca ggccgtgact cagccagcag atgggaggaa agtggagaga 420 tcacctctac aggaggaagc caagaggttc tggcatcggt tcatgttcag aaagggcccg 480 gcgttccagg gagtcatcct gcccatcaaa agccacgaag tacactggga gacctgcagg 540 actgtgccct tcaaccagac cattgcccat gaagactgtc aaaaagtcgt tgtccagaac 600 aacctttgct ttggcaaatg cagttccatt cgttttcccg gagaaggggc agatgcccac 660 agcttctgct cccactgctc gcccaccaaa ttcaccaccg tgcacttgat gctgaactgc 720 accagcccaa cccccgtggt caagatggtg atgcaagtag aagagtgtca gtgcatggtg 780 aagacggaac gtggagagga gcgcctccta ctggctggtt cccagggttc cttcatccct 840 ggacttccag cttcaaaaac aaacccatga attacctcaa cagaaagcaa aacctcaaca 900 gaataagtga gggttattca atctggaaat gttatgtgag ttatataaag atcagtggaa 960 aatatctttc tctctccctc tctccccctc tctcttctct ctattttctc tctctctctc 1020 tctctctctc tctctctctc tctctctcac acacacacac acacacacac acacacacac 1080 atgtttgtgt ttagacaggg tcttatgtat tctcagctgg cctcaaactc acaatgtggc 1140 tggggatgat tttaaactcc tgatccaatt cctgagtgct gggattacag acatgctcca 1200 taatacatag ctcccagaag gatttttaaa agagattttg catgtttcaa agttgccttt 1260 gagactcaga aaatattttg attctattga atggccttgc cacagat 1307 //