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EBI Dbfetch

ID   BC132431; SV 1; linear; mRNA; STD; MUS; 1307 BP.
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AC   BC132431;
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DT   02-FEB-2007 (Rel. 90, Created)
DT   07-DEC-2007 (Rel. 94, Last updated, Version 2)
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DE   Mus musculus cerberus 1 homolog (Xenopus laevis), mRNA (cDNA clone
DE   MGC:164062 IMAGE:40130708), complete cds.
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KW   MGC.
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OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Mus; Mus.
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RN   [1]
RP   1-1307
RX   DOI; 10.1073/pnas.242603899.
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
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RN   [2]
RC   NIH-MGC Project URL: http://mgc.nci.nih.gov
RP   1-1307
RG   NIH MGC Project
RA   ;
RT   ;
RL   Submitted (31-JAN-2007) to the INSDC.
RL   National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda,
RL   MD 20892-2590, USA
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DR   MD5; d8680515eefe0fa46df11133430e2574.
DR   Ensembl-Gn; ENSMUSG00000038192; mus_musculus.
DR   Ensembl-Tr; ENSMUST00000048430; mus_musculus.
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CC   Contact: MGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: Ambion
CC   cDNA Library Preparation: British Columbia Cancer Research Center
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: Genome Sequence Centre,
CC   BC Cancer Agency, Vancouver, BC, Canada
CC   info@bcgsc.bc.ca
CC   Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
CC   Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
CC   Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
CC   Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
CC   Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
CC   Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
CC   Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
CC   Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
CC   Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRCK Plate: 6 Row: G Column: 5.
CC   Differences found between this sequence and the mouse C57BL/6J
CC   genome (build 36) are described in misc_difference features below.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1307
FT                   /organism="Mus musculus"
FT                   /lab_host="DH10B"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NIH_MGC_389"
FT                   /clone="MGC:164062 IMAGE:40130708"
FT                   /tissue_type="Brain,thymus,testicle,kidney,spleen,liver,
FT                   heart,lung,ovary,embryo - PCR rescued clones"
FT                   /note="Vector: pCR4-TOPO; Clone identification sequence
FT                   tag: TTCTCACG"
FT                   /db_xref="taxon:10090"
FT   gene            1..1307
FT                   /gene="Cer1"
FT                   /note="synonyms: cer-1, Cerl"
FT   CDS             52..870
FT                   /codon_start=1
FT                   /gene="Cer1"
FT                   /product="cerberus 1 homolog (Xenopus laevis)"
FT                   /db_xref="GOA:A2ADM9"
FT                   /db_xref="InterPro:IPR004133"
FT                   /db_xref="InterPro:IPR006207"
FT                   /db_xref="InterPro:IPR016860"
FT                   /db_xref="MGI:MGI:1201414"
FT                   /db_xref="UniProtKB/TrEMBL:A2ADM9"
FT                   /protein_id="AAI32432.1"
FT                   /translation="MHLLLVQLLVLLPLGKADLCVDGCQSQGSLSFPLLERGRRDLHVA
FT                   NHEEAEDKPDLFVAVPHLMGTSLAGEGQRQRGKMLSRLGRFWKKPETEFYPPRDVESDH
FT                   VSSGMQAVTQPADGRKVERSPLQEEAKRFWHRFMFRKGPAFQGVILPIKSHEVHWETCR
FT                   TVPFNQTIAHEDCQKVVVQNNLCFGKCSSIRFPGEGADAHSFCSHCSPTKFTTVHLMLN
FT                   CTSPTPVVKMVMQVEECQCMVKTERGEERLLLAGSQGSFIPGLPASKTNP"
FT   misc_difference 1294^1295
FT                   /gene="Cer1"
FT                   /note="1 base in the mouse genome, G, is not found in
FT                   cDNA."
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SQ   Sequence 1307 BP; 330 A; 347 C; 306 G; 324 T; 0 other;
     ttaggcccgt ccatctgtga atctaacctc agtctctggg aatcaggaag catgcatctc        60
     ctcttagttc agctgcttgt tctcttgcct ctggggaagg cagacctatg tgtggatggc       120
     tgccagagtc agggctcttt atcctttcct ctcctagaaa ggggtcgcag agatctccac       180
     gtggccaacc acgaggaggc agaagacaag ccggatctgt ttgtggccgt gccacacctc       240
     atgggcacca gcctggctgg ggaaggccag aggcagagag ggaagatgct gtccaggctt       300
     ggaagattct ggaagaaacc tgagaccgaa ttttaccccc caagggatgt ggaaagcgat       360
     catgtctcat cggggatgca ggccgtgact cagccagcag atgggaggaa agtggagaga       420
     tcacctctac aggaggaagc caagaggttc tggcatcggt tcatgttcag aaagggcccg       480
     gcgttccagg gagtcatcct gcccatcaaa agccacgaag tacactggga gacctgcagg       540
     actgtgccct tcaaccagac cattgcccat gaagactgtc aaaaagtcgt tgtccagaac       600
     aacctttgct ttggcaaatg cagttccatt cgttttcccg gagaaggggc agatgcccac       660
     agcttctgct cccactgctc gcccaccaaa ttcaccaccg tgcacttgat gctgaactgc       720
     accagcccaa cccccgtggt caagatggtg atgcaagtag aagagtgtca gtgcatggtg       780
     aagacggaac gtggagagga gcgcctccta ctggctggtt cccagggttc cttcatccct       840
     ggacttccag cttcaaaaac aaacccatga attacctcaa cagaaagcaa aacctcaaca       900
     gaataagtga gggttattca atctggaaat gttatgtgag ttatataaag atcagtggaa       960
     aatatctttc tctctccctc tctccccctc tctcttctct ctattttctc tctctctctc      1020
     tctctctctc tctctctctc tctctctcac acacacacac acacacacac acacacacac      1080
     atgtttgtgt ttagacaggg tcttatgtat tctcagctgg cctcaaactc acaatgtggc      1140
     tggggatgat tttaaactcc tgatccaatt cctgagtgct gggattacag acatgctcca      1200
     taatacatag ctcccagaag gatttttaaa agagattttg catgtttcaa agttgccttt      1260
     gagactcaga aaatattttg attctattga atggccttgc cacagat                    1307
//


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