Dbfetch
ID BC113521; SV 1; linear; mRNA; STD; HUM; 1339 BP. XX AC BC113521; XX DT 21-NOV-2006 (Rel. 89, Created) DT 16-OCT-2008 (Rel. 97, Last updated, Version 4) XX DE Homo sapiens choline kinase beta, mRNA (cDNA clone MGC:142081 DE IMAGE:8322573), complete cds. XX KW MGC. XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-1339 RX DOI; 10.1073/pnas.242603899. RX PUBMED; 12477932. RG Mammalian Gene Collection Program Team RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D., RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F., RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H., RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K., RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F., RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S., RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J., RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J., RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M., RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X., RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G., RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C., RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I., RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.; RT "Generation and initial analysis of more than 15,000 full-length human and RT mouse cDNA sequences"; RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002). XX RN [2] RC NIH-MGC Project URL: http://mgc.nci.nih.gov RP 1-1339 RG NIH MGC Project RA ; RT ; RL Submitted (21-FEB-2006) to the INSDC. RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, RL MD 20892-2590, USA XX DR MD5; b67c02a424482145e72f72eec21bd93f. DR Ensembl-Gn; ENSG00000100288; homo_sapiens. DR Ensembl-Tr; ENST00000406938; homo_sapiens. XX CC Contact: MGC help desk CC Email: cgapbs-r@mail.nih.gov CC Tissue Procurement: Mike Brownstein, NIMH CC cDNA Library Preparation: British Columbia Cancer Research Center CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) CC DNA Sequencing by: Genome Sequence Centre, CC BC Cancer Agency, Vancouver, BC, Canada CC info@bcgsc.bc.ca CC Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson CC Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen CC Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel CC Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave CC Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, CC Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR CC Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, CC Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. CC Clone distribution: MGC clone distribution information can be found CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov CC Series: IRCB Plate: 5 Row: g Column: 19. XX FH Key Location/Qualifiers FH FT source 1..1339 FT /organism="Homo sapiens" FT /mol_type="mRNA" FT /clone_lib="NIH_MGC_311" FT /clone="MGC:142081 IMAGE:8322573" FT /tissue_type="Brain, cerebellum, PCR rescued clones" FT /note="Vector: pCR4-TOPO with reversed insert; Clone FT identification sequence tag: CATAACGC" FT /db_xref="taxon:9606" FT gene 1..1339 FT /gene="CHKB" FT /note="synonym: CHETK" FT misc_feature 1..1339 FT /gene="CHKB" FT /note="This cDNA sequence aligns to the human reference FT genome (build 36) without differences" FT CDS 64..1251 FT /codon_start=1 FT /gene="CHKB" FT /product="choline kinase beta" FT /db_xref="GOA:Q9Y259" FT /db_xref="H-InvDB:HIT000386974.6" FT /db_xref="HGNC:HGNC:1938" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR026712" FT /db_xref="PDB:2IG7" FT /db_xref="PDB:3FEG" FT /db_xref="PDB:3LQ3" FT /db_xref="UniProtKB/Swiss-Prot:Q9Y259" FT /protein_id="AAI13522.2" FT /translation="MAAEATAVAGSGAVGGCLAKDGLQQSKCPDTTPKRRRASSLSRDA FT ERRAYQWCREYLGGAWRRVQPEELRVYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLR FT LYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPEGRLEQYIPSRPLKTQELREPVL FT SAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEM FT GNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSYNYRGFDIGNHF FT CEWVYDYTHEEWPFYKARPTDYPTQEQQLHFIRHYLAEAKKGETLSQEEQRKLEEDLLV FT EVSRYALASHFFWGLWSILQASMSTIEFGYLDYAQSRFQFYFQQKGQLTSVHSSS" XX SQ Sequence 1339 BP; 288 A; 387 C; 398 G; 266 T; 0 other; gaaccgagcc cgtccgaagg gagcggagcg cagcctggcc tggggcccgg tcgagcccgc 60 gccatggcgg ccgaggcgac agctgtggcc ggaagcgggg ctgttggcgg ctgcctggcc 120 aaagacggct tgcagcagtc taagtgcccg gacactaccc caaaacggcg gcgcgcctcg 180 tcgctgtcgc gtgacgccga gcgccgagcc taccaatggt gccgggagta cttgggcggg 240 gcctggcgcc gagtgcagcc cgaggagctg agggtttacc ccgtgagcgg aggcctcagc 300 aacctgctct tccgctgctc gctcccggac cacctgccca gcgttggcga ggagccccgg 360 gaggtgcttc tgcggctgta cggagccatc ttgcagggcg tggactccct ggtgctagaa 420 agcgtgatgt tcgccatact tgcggagcgg tcgctggggc cccagctgta cggagtcttc 480 ccagagggcc ggctggaaca gtacatccca agtcggccat tgaaaactca agagcttcga 540 gagccagtgt tgtcagcagc cattgccacg aagatggcgc aatttcatgg catggagatg 600 cctttcacca aggagcccca ctggctgttt gggaccatgg agcggtacct aaaacagatc 660 caggacctgc ccccaactgg cctccctgag atgaacctgc tggagatgta cagcctgaag 720 gatgagatgg gcaacctcag gaagttacta gagtctaccc catcgccagt cgtcttctgc 780 cacaatgaca tccaggaagg gaacatcttg ctgctctcag agccagaaaa tgctgacagc 840 ctcatgctgg tggacttcga gtacagcagt tataactata ggggctttga cattgggaac 900 catttttgtg agtgggttta tgattatact cacgaggaat ggcctttcta caaagcaagg 960 cccacagact accccactca agaacagcag ttgcatttta ttcgtcatta cctggcagag 1020 gcaaagaaag gtgagaccct ctcccaagag gagcagagaa aactggaaga agatttgctg 1080 gtagaagtca gtcggtatgc tctggcatcc catttcttct ggggtctgtg gtccatcctc 1140 caggcatcca tgtccaccat agaatttggt tacttggact atgcccagtc tcggttccag 1200 ttctacttcc agcagaaggg gcagctgacc agtgtccact cctcatcctg actccaccct 1260 cccactcctt ggatttctcc tggagcctcc agggcaggac cttggaggga ggaacaacga 1320 gcagaaggcc ctggcgact 1339 //