ID BC093019; SV 1; linear; mRNA; STD; HUM; 1564 BP.
XX
AC BC093019;
XX
DT 06-APR-2005 (Rel. 83, Created)
DT 15-OCT-2008 (Rel. 97, Last updated, Version 7)
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DE Homo sapiens tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation
DE protein, theta polypeptide, mRNA (cDNA clone MGC:110899 IMAGE:30520472),
DE complete cds.
XX
KW MGC.
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OS Homo sapiens (human)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC Homo.
XX
RN [1]
RP 1-1564
RX DOI; 10.1073/pnas.242603899.
RX PUBMED; 12477932.
RG Mammalian Gene Collection Program Team
RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT "Generation and initial analysis of more than 15,000 full-length human and
RT mouse cDNA sequences";
RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
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RN [2]
RC NIH-MGC Project URL: http://mgc.nci.nih.gov
RP 1-1564
RG NIH MGC Project
RA ;
RT ;
RL Submitted (04-APR-2005) to the INSDC.
RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda,
RL MD 20892-2590, USA
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DR MD5; 0d39de060d86c9f40ab6bff003f21c75.
DR Ensembl-Gn; ENSG00000134308; homo_sapiens.
DR Ensembl-Tr; ENST00000238081; homo_sapiens.
DR Ensembl-Tr; ENST00000381844; homo_sapiens.
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CC Contact: MGC help desk
CC Email: cgapbs-r@mail.nih.gov
CC Tissue Procurement: Dr. Stefan Hansson
CC cDNA Library Preparation: Michael Brownstein / Ted Usdin
CC Laboratory
CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC DNA Sequencing by: Sequencing Group at the Stanford Human Genome
CC Center, Stanford University School of Medicine, Stanford, CA 94305
CC Web site: http://www-shgc.stanford.edu
CC Contact: (Dickson, Mark) mcd@paxil.stanford.edu
CC Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
CC R. M.
CC Clone distribution: MGC clone distribution information can be found
CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC Series: IRAK Plate: 198 Row: l Column: 4
CC This clone was selected for full length sequencing because it
CC passed the following selection criteria: matched mRNA gi: 21464103.
CC Differences found between this sequence and the human reference
CC genome (build 36) are described in misc_difference features below.
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FH Key Location/Qualifiers
FH
FT source 1..1564
FT /organism="Homo sapiens"
FT /lab_host="DH10B"
FT /mol_type="mRNA"
FT /clone_lib="NIH_MGC_147"
FT /clone="MGC:110899 IMAGE:30520472"
FT /tissue_type="Placenta, normal"
FT /note="Vector: pBluescriptR"
FT /db_xref="taxon:9606"
FT gene 1..1564
FT /gene="YWHAQ"
FT /note="synonyms: HS1, 1C5"
FT CDS 140..877
FT /codon_start=1
FT /gene="YWHAQ"
FT /product="tyrosine 3-monooxygenase/tryptophan
FT 5-monooxygenase activation protein, theta polypeptide"
FT /db_xref="GOA:P27348"
FT /db_xref="H-InvDB:HIT000334510.10"
FT /db_xref="HGNC:HGNC:12854"
FT /db_xref="InterPro:IPR000308"
FT /db_xref="InterPro:IPR023409"
FT /db_xref="InterPro:IPR023410"
FT /db_xref="InterPro:IPR036815"
FT /db_xref="PDB:2BTP"
FT /db_xref="PDB:5IQP"
FT /db_xref="PDB:6BCR"
FT /db_xref="PDB:6BD2"
FT /db_xref="PDB:6BQT"
FT /db_xref="UniProtKB/Swiss-Prot:P27348"
FT /protein_id="AAH93019.1"
FT /translation="MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLS
FT VAYKNVVGGRRSAWRVISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELLDKY
FT LIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPT
FT HPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLR
FT DNLTLWTSDSAGEECDAAEGAEN"
FT misc_difference 1549..1564
FT /gene="YWHAQ"
FT /note="polyA tail: 16 bases do not align to the human
FT genome."
XX
SQ Sequence 1564 BP; 434 A; 374 C; 347 G; 409 T; 0 other;
aaagccaaaa gcagatcaaa gtggtgggac tcgcgtcgcg gccgcggaga cgtgaagctc 60
tcgaggctcc tcccgctgcg ggtcggcgct cgccctcgct ctcctcgccc tccgccccgg 120
ccccggcccc gcgcccgcca tggagaagac tgagctgatc cagaaggcca agctggccga 180
gcaggccgag cgctacgacg acatggccac ctgcatgaag gcagtgaccg agcagggcgc 240
cgagctgtcc aacgaggagc gcaacctgct ctccgtggcc tacaagaacg tggtcggggg 300
ccgcaggtcc gcctggaggg tcatctctag catcgagcag aagaccgaca cctccgacaa 360
gaagttgcag ctgattaagg actatcggga gaaagtggag tccgagctga gatccatctg 420
caccacggtg ctggaattgt tggataaata tttaatagcc aatgcaacta atccagagag 480
taaggtcttc tatctgaaaa tgaagggtga ttacttccgg taccttgctg aagttgcgtg 540
tggtgatgat cgaaaacaaa cgatagataa ttcccaagga gcttaccaag aggcatttga 600
tataagcaag aaagagatgc aacccacaca cccaatccgc ctggggcttg ctcttaactt 660
ttctgtattt tactatgaga ttcttaataa cccagagctt gcctgcacgc tggctaaaac 720
ggcttttgat gaggccattg ctgaacttga tacactgaat gaagactcat acaaagacag 780
caccctcatc atgcagttgc ttagagacaa cctaacactt tggacatcag acagtgcagg 840
agaagaatgt gatgcggcag aaggggctga aaactaaatc catacagggt gtcatccttc 900
tttccttcaa gaaacctttt tacacatctc cattccttat tccacttgga tttcctatag 960
caaagaaacc cattcatgtg tatggaatca actgtttata gtcttttcac actgcagctt 1020
tgggaaaact tcattccttg atttgtgttt gtcttggcct tcctggtgtg cagtactgct 1080
gtagaaaagt attaatagct tcatttcata taaacataag taactcccaa acacttatgt 1140
agaggactaa aaatgtatct ggtatttaag taatctgaac cagttctgca agtgactgtg 1200
ttttgtatta ctgtgaaaat aagaaaatgt agttaattac aatttaaaga gtattccaca 1260
taacttctta atttctacat tccctccctt actcttcggg ggtttccttt cagtaagcaa 1320
cttttccatg ctcttaatgt attccttttt agtaggaatc cggaagtatt agattgaatg 1380
gaaaagcact tgccatctct gtctaggggt cacaaattga aatggctcct gtatcacata 1440
cggaggtctt gtgtatctgt ggcaacaggg agtttcctta ttcactcttt atttgctgct 1500
gtttaagttg ccaacctccc ctcccaataa aaattcactt acacctccaa aaaaaaaaaa 1560
aaaa 1564
//