Dbfetch
ID BC057005; SV 1; linear; mRNA; STD; MUS; 4611 BP.
XX
AC BC057005;
XX
DT 18-SEP-2003 (Rel. 77, Created)
DT 24-SEP-2008 (Rel. 97, Last updated, Version 13)
XX
DE Mus musculus sprouty homolog 4 (Drosophila), mRNA (cDNA clone MGC:67021
DE IMAGE:6821944), complete cds.
XX
KW MGC.
XX
OS Mus musculus (house mouse)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
XX
RN [1]
RP 1-4611
RX DOI; 10.1073/pnas.242603899.
RX PUBMED; 12477932.
RG Mammalian Gene Collection Program Team
RA Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT "Generation and initial analysis of more than 15,000 full-length human and
RT mouse cDNA sequences";
RL Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN [2]
RC NIH-MGC Project URL: http://mgc.nci.nih.gov
RP 1-4611
RG NIH MGC Project
RA ;
RT ;
RL Submitted (25-AUG-2003) to the INSDC.
RL National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda,
RL MD 20892-2590, USA
XX
DR MD5; ee7910438e82f6e90d9c630d2a7a94aa.
DR Ensembl-Gn; ENSMUSG00000024427; mus_musculus.
DR Ensembl-Gn; MGP_129S1SvImJ_G0024365; mus_musculus_129s1svimj.
DR Ensembl-Gn; MGP_AJ_G0024332; mus_musculus_aj.
DR Ensembl-Gn; MGP_AKRJ_G0024301; mus_musculus_akrj.
DR Ensembl-Gn; MGP_BALBcJ_G0024332; mus_musculus_balbcj.
DR Ensembl-Gn; MGP_C3HHeJ_G0024098; mus_musculus_c3hhej.
DR Ensembl-Gn; MGP_C57BL6NJ_G0024774; mus_musculus_c57bl6nj.
DR Ensembl-Gn; MGP_CASTEiJ_G0023573; mus_musculus_casteij.
DR Ensembl-Gn; MGP_CBAJ_G0024068; mus_musculus_cbaj.
DR Ensembl-Gn; MGP_DBA2J_G0024198; mus_musculus_dba2j.
DR Ensembl-Gn; MGP_FVBNJ_G0024164; mus_musculus_fvbnj.
DR Ensembl-Gn; MGP_LPJ_G0024282; mus_musculus_lpj.
DR Ensembl-Gn; MGP_NODShiLtJ_G0024195; mus_musculus_nodshiltj.
DR Ensembl-Gn; MGP_NZOHlLtJ_G0024823; mus_musculus_nzohlltj.
DR Ensembl-Gn; MGP_PWKPhJ_G0023317; mus_musculus_pwkphj.
DR Ensembl-Gn; MGP_WSBEiJ_G0023636; mus_musculus_wsbeij.
DR Ensembl-Tr; ENSMUST00000025295; mus_musculus.
DR Ensembl-Tr; MGP_129S1SvImJ_T0049523; mus_musculus_129s1svimj.
DR Ensembl-Tr; MGP_AJ_T0049505; mus_musculus_aj.
DR Ensembl-Tr; MGP_AKRJ_T0049466; mus_musculus_akrj.
DR Ensembl-Tr; MGP_BALBcJ_T0049467; mus_musculus_balbcj.
DR Ensembl-Tr; MGP_C3HHeJ_T0049199; mus_musculus_c3hhej.
DR Ensembl-Tr; MGP_C57BL6NJ_T0049949; mus_musculus_c57bl6nj.
DR Ensembl-Tr; MGP_CASTEiJ_T0049301; mus_musculus_casteij.
DR Ensembl-Tr; MGP_CBAJ_T0049129; mus_musculus_cbaj.
DR Ensembl-Tr; MGP_DBA2J_T0049226; mus_musculus_dba2j.
DR Ensembl-Tr; MGP_FVBNJ_T0049201; mus_musculus_fvbnj.
DR Ensembl-Tr; MGP_LPJ_T0049350; mus_musculus_lpj.
DR Ensembl-Tr; MGP_NODShiLtJ_T0049202; mus_musculus_nodshiltj.
DR Ensembl-Tr; MGP_NZOHlLtJ_T0050064; mus_musculus_nzohlltj.
DR Ensembl-Tr; MGP_PWKPhJ_T0048899; mus_musculus_pwkphj.
DR Ensembl-Tr; MGP_WSBEiJ_T0048492; mus_musculus_wsbeij.
XX
CC Contact: MGC help desk
CC Email: cgapbs-r@mail.nih.gov
CC Tissue Procurement: Dr. Jim Lin, University of Iowa
CC cDNA Library Preparation: M. Bento Soares, University of Iowa
CC cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC DNA Sequencing by: Genome Sequence Centre,
CC BC Cancer Agency, Vancouver, BC, Canada
CC info@bcgsc.bc.ca
CC Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
CC Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
CC Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
CC Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
CC Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
CC Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
CC Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
CC Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
CC Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
CC Clone distribution: MGC clone distribution information can be found
CC through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC Series: IRAK Plate: 126 Row: h Column: 22
CC This clone was selected for full length sequencing because it
CC passed the following selection criteria: matched mRNA gi: 31543766.
CC Differences found between this sequence and the mouse C57BL/6J
CC genome (build 36) are described in misc_difference features below.
XX
FH Key Location/Qualifiers
FH
FT source 1..4611
FT /organism="Mus musculus"
FT /lab_host="DH10B"
FT /strain="C57BL/6"
FT /mol_type="mRNA"
FT /clone_lib="NIH_BMAP_FY0"
FT /clone="MGC:67021 IMAGE:6821944"
FT /tissue_type="Brain, mouse, 13.5,14.5,16.5,17.5 dpc"
FT /note="Vector: pYX-ASC"
FT /db_xref="taxon:10090"
FT gene 1..4611
FT /gene="Spry4"
FT /note="synonym: sprouty4"
FT CDS 147..1049
FT /codon_start=1
FT /gene="Spry4"
FT /product="sprouty homolog 4 (Drosophila)"
FT /db_xref="GOA:Q9WTP2"
FT /db_xref="InterPro:IPR007875"
FT /db_xref="InterPro:IPR030790"
FT /db_xref="MGI:MGI:1345144"
FT /db_xref="UniProtKB/Swiss-Prot:Q9WTP2"
FT /protein_id="AAH57005.1"
FT /translation="MEPPVPQSSVPVNPSSVMVQPLLDSRAPHSRLQHPLTILPIDQMK
FT TSHVENDYIDNPSLAPATGPKRPRGGPPELAPTPARCDQDITHHWISFSGRPSSVSSSS
FT STSSDQRLLDHMAPPPVAEQASPRAVRLQPKVVHCKPLDLKGPTAPPELDKHFLLCEAC
FT GKCKCKECASPRTLPSCWVCNQECLCSAQTLVNYGTCMCLVQGIFYHCTNEDDEGSCAD
FT HPCSCSGSNCCARWSFMGALSVVLPCLLCYLPATGCVKLAQRGYDRLRRPGCRCKHTNS
FT VICKAASGDTKTSRSDKPF"
FT misc_difference 4591..4611
FT /gene="Spry4"
FT /note="polyA tail: 21 bases do not align to the mouse
FT genome."
XX
SQ Sequence 4611 BP; 1064 A; 1209 C; 1123 G; 1215 T; 0 other;
ctccgactga cgtctgcgac ttcaacggcg actgacccac tcgggttcgg ggatttacac 60
agacgtggag cgatgcttgt gactctgcag ctcctcaaag acccctagaa gcctgtccct 120
tggtgcagtt caggacctcc agcctcatgg agcccccggt tccacagagc agcgtccctg 180
tgaatcccag ctcagtcatg gtgcagcccc tccttgacag cagagcgccc cacagccggc 240
tccagcaccc actcaccatc ttacccattg accagatgaa gaccagccac gtggagaatg 300
actacataga caaccctagc ctggcccctg ccacgggtcc caagcggccc cggggcgggc 360
caccagagct ggctcctaca cctgcccgct gtgaccagga tattactcac cactggatct 420
ccttcagcgg tcggcccagc tctgtaagca gcagtagcag cacttcctcc gaccagaggc 480
tcctagatca catggctcca ccgcccgtgg ctgagcaggc ctcacccagg gctgtgcgcc 540
tccagcccaa ggtggttcac tgtaagccgc tggacctcaa aggcccgaca gctccgccag 600
agctagacaa gcacttcttg ctgtgtgagg cctgtggaaa gtgtaagtgc aaagagtgtg 660
cgtcccctcg gacgttacct tcctgctggg tctgcaacca ggagtgcctg tgctcggctc 720
agacgctggt caactatggc acatgcatgt gtctggtgca aggtatcttc tatcactgta 780
ctaatgagga tgatgagggc tcttgcgccg accacccctg ctcctgttcc ggctccaact 840
gctgcgcccg ctggtccttc atgggcgccc tctctgtggt gctgccctgt ctgctgtgct 900
acctgccggc cacaggctgc gtcaagctgg cccagcgagg ctacgaccgc ctgagacgcc 960
ccggttgccg ctgcaagcac acgaacagcg tcatctgcaa ggcagccagt ggggacacca 1020
agaccagcag gtctgacaag cctttctgac actttggatg aaaaaaacat ggtccctcct 1080
gccagtctcc tgagactgac cttgctcatc tgtcctctcc taaaacccta gattgggaag 1140
aaaccggcag agaacactac tgcctagcct tgagtcccca aaaggatgaa gatgtacttt 1200
ggggattttc acagtcttga aactttgtta aacagcagtg acagtgttag ggtatggtgg 1260
tagggggccc agttttccta tttcagaaga cggaagacag atgcggacac agggtctgca 1320
agttcagcca ctcaatggcc ttcccagccc ctctgcttcc tctcattttg ccattctctc 1380
tggctcctgc tggagccttc tacctgggag gaacagctaa tgggaggcaa gatacctcga 1440
ggaagaccct ccgagccttg acttctatct ttgccgcctc cgtccatgcc tgttggcctt 1500
ggcctcttgg gaaggtgcac cgtagccatt cctgctgtat gcacttgatg tccgagaaca 1560
aaatcgccgg taagctgctg cctcccgtga gtagcaggat ggagaaggaa ccacctggca 1620
gtgtgttcct cctagctttc aatcactaac ttgggggttg tccgctcatc acgccatcct 1680
ccagttcaca gactggcctg cctgctatgc gtcctgagca ctctttctac tcggattctt 1740
tgtagaaact cgctgggtta agaaggccag gatgacacaa gcaagaccaa atatcatttt 1800
gccaatgagt ctgaggctgt ggtctctgga tccagccatg atgtttttat atgtttaatt 1860
aaactagatg ctattggtgt ttaaacaata ataatacaac aaccttgctt ccttttgggc 1920
cacccccagg aagggctgat ttcaaaatct gggggtaagc aacctcaagg agcgtttccc 1980
ctgcacatcg agaatggcaa agaagaggcc gtacctccca ttggcaggat gacagttgag 2040
ccgaactggg gttgggtttt cttgtgattc tgctgcttgc tgtctctagc cttttgtgta 2100
tagtgatgcg tctgtcttta tgtaaataga gatgacagag tctattttag tgttaagaag 2160
ccctggtggg gaagtcggaa gatgccagag aaggtgggga acgatcctcc aggggctgct 2220
gggtttgagc cccacttttt gtgtgcacac acacagacac ccctcccaac agcccccaaa 2280
gacgtagcaa ctctttctct cacggtgcta aaggactcag aacgcgcagc ccgtccagtg 2340
ggtaggtact tgttgcatgc aaaaagctat cgtgtctctg gtccttgccc ccagctgttg 2400
tgtgggtggg ttttttttgt tttttttgtt tttttttttg ttgttgtttt tggttttggt 2460
tttttctttg tgtggtattt tgtccccatc cctgcctctg attcaagaaa tagcctgggt 2520
cagaagaggt accccaggta aaattgagag agcattaggc aaaaatcatg tggagcattt 2580
ctggttcttt tgtgtgagca gcccctaggg aggaggcaag gagtcaggta gctgtaagtg 2640
gagtgtacct attgctcttt tctcaaggat tcacccccac ccccaccttg gaagctacta 2700
gtagtaatag taacacctta tgatttagaa taagttaatt gtaaccatag gtatttattg 2760
attggaggaa gggagggttt tattttcagc tttatttatg caacatttac tggcttgtaa 2820
aaggcaagta taaaatcctg catcttcatc gtctataact aatccataca tatacctgcc 2880
cttgccacat tgcagtgttc ttgcacagaa cggaaggaaa gatagaagac aaacccctgc 2940
gatcagcaaa ccacttacac taattgaatg tattagaagc tttctgaagg ggctggagat 3000
gttttcctcg aatgaggggt gtggagggac ccccccccca aaaaaaaacc ctgatagcgc 3060
acacgtgcac tctttctaag aagcctggga gcttcaccca gggtccctcc ctcaatttgt 3120
atccacagga cagctgaccc agtggcaggt tgcactttgg tgatcttggt ctgcatacgt 3180
ctgtggacag ttgagctata taagccgtgt atgcgcacat gcacacgtga cacttacata 3240
cacagaccct ctaccacaca gaccctgttt cctggcaacc cttcccaaac cctgactttg 3300
tgtacatagc tgtaaacacg gatttggggg gttttggttt gcttccccac ctcaccaacc 3360
ccttgttctg gtttggaaat gatgtctaca gaattcttcc tccccacaga agttgacctt 3420
gggactcact tgctcagtgg taagggaagg ggagaaggaa ggaaggaagc atcctttttc 3480
ctctgctctg ttgttttttc tctgacttct tggcaaacac acatagggga tgcaaacaca 3540
gaaaaggggt agtttgttta tagggccccc tccccttccc aggttagtca acaggcattg 3600
ggaacacagg ctctcacaaa cagaacattt ctgtagctgt ttctgacttc ttggctagca 3660
tttgcagctt ttgcttggct tgagttaaca tcacttccaa agtgccagct ggttcccact 3720
tctagacctg gggtggctgt cagttgtgcc tggagccaag gatggcttcc gggatctttc 3780
ttaaggtgcc tgggctactt ggtaccattg tagggaaagg ctggttctcc tgtaagcact 3840
ctgggggctg agtttaggct agcaacatct tccaaggtac catcaatgct cctcaagcca 3900
actggaagag agcaacgagc ggcctttctc agcgatggga ggcatcctta cgactgatag 3960
gttctttgag ctagtgtagt tctgcatcaa tggggcccag ctggatcaca gcctcaaggg 4020
aacaacacat accaagttgg tcaggggcag aaccaggcag gtacccatca ttctagagca 4080
gcttggtctc cagtgctgct ccaagaaata gtggaggcgt gtgggcagca cacatttgca 4140
ctgtacaatt gaacatccgg ggcttccccg gcttcccaat ttatgcattt ggtgagtagc 4200
tccgtgccct tccccgctct gtaatggtgg atgtcgatcc tgtgtttcca ttttgattgt 4260
gggtgactgt gctgtttctt agcttgcttt tctcttgtgt cctgtggttg atttcctgtt 4320
agcagcacta gagctgtgcc cagcacccca ctccaccaca ttcctgtgtc tctgtagctc 4380
cccctccccg cccctgttca tcccaccaca aaagttacca cagaaggttt cctttgtaaa 4440
aaatatttat tttgaagctc tattttaata gtatttattt tagaaagtct actattgtaa 4500
gagttcttct gtttgtgaag aaaaaaaaac aagttaaaaa ctgaatgtac tgatctagaa 4560
gatatctata aatatatatt gttaaatata aaaaaaaaaa aaaaaaaaaa a 4611
//
