Dbfetch

ID   BC023561; SV 2; linear; mRNA; STD; HUM; 2021 BP.
XX
AC   BC023561;
XX
DT   24-SEP-2002 (Rel. 73, Created)
DT   15-OCT-2008 (Rel. 97, Last updated, Version 7)
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DE   Homo sapiens chromosome 7 open reading frame 27, mRNA (cDNA clone
DE   IMAGE:4025532), partial cds.
XX
KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-2021
RX   DOI; 10.1073/pnas.242603899.
RX   PUBMED; 12477932.
RG   Mammalian Gene Collection Program Team
RA   Strausberg R.L., Feingold E.A., Grouse L.H., Derge J.G., Klausner R.D.,
RA   Collins F.S., Wagner L., Shenmen C.M., Schuler G.D., Altschul S.F.,
RA   Zeeberg B., Buetow K.H., Schaefer C.F., Bhat N.K., Hopkins R.F., Jordan H.,
RA   Moore T., Max S.I., Wang J., Hsieh F., Diatchenko L., Marusina K.,
RA   Farmer A.A., Rubin G.M., Hong L., Stapleton M., Soares M.B., Bonaldo M.F.,
RA   Casavant T.L., Scheetz T.E., Brownstein M.J., Usdin T.B., Toshiyuki S.,
RA   Carninci P., Prange C., Raha S.S., Loquellano N.A., Peters G.J.,
RA   Abramson R.D., Mullahy S.J., Bosak S.A., McEwan P.J., McKernan K.J.,
RA   Malek J.A., Gunaratne P.H., Richards S., Worley K.C., Hale S., Garcia A.M.,
RA   Gay L.J., Hulyk S.W., Villalon D.K., Muzny D.M., Sodergren E.J., Lu X.,
RA   Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S.,
RA   Sanchez A., Whiting M., Madan A., Young A.C., Shevchenko Y., Bouffard G.G.,
RA   Blakesley R.W., Touchman J.W., Green E.D., Dickson M.C., Rodriguez A.C.,
RA   Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Krzywinski M.I.,
RA   Skalska U., Smailus D.E., Schnerch A., Schein J.E., Jones S.J., Marra M.A.;
RT   "Generation and initial analysis of more than 15,000 full-length human and
RT   mouse cDNA sequences";
RL   Proc. Natl. Acad. Sci. U.S.A. 99(26):16899-16903(2002).
XX
RN   [2]
RC   NIH-MGC Project URL: http://mgc.nci.nih.gov
RP   1-2021
RA   Strausberg R.;
RT   ;
RL   Submitted (05-FEB-2002) to the INSDC.
RL   National Institutes of Health, Mammalian Gene Collection (MGC), Cancer
RL   Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03,
RL   Bethesda, MD 20892-2590, USA
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DR   MD5; 45df2cb80ba42a2657eb6ea670fcd8e0.
DR   Ensembl-Gn; ENSG00000106009; homo_sapiens.
DR   Ensembl-Tr; ENST00000340611; homo_sapiens.
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CC   On Dec 19, 2003 this sequence version replaced gi:23270790.
CC   Contact: MGC help desk
CC   Email: cgapbs-r@mail.nih.gov
CC   Tissue Procurement: ATCC/DCTD/DTP
CC   cDNA Library Preparation: Rubin Laboratory
CC   cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
CC   DNA Sequencing by: National Institutes of Health Intramural
CC   Sequencing Center (NISC),
CC   Gaithersburg, Maryland;
CC   Web site: http://www.nisc.nih.gov/
CC   Contact: nisc_mgc@nhgri.nih.gov
CC   Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
CC   Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
CC   Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
CC   Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
CC   Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
CC   McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
CC   Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
CC   Young,A., Zhang,L.-H. and Green,E.D.
CC   Clone distribution: MGC clone distribution information can be found
CC   through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
CC   Series: IRAL Plate: 28 Row: h Column: 11.
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FH   Key             Location/Qualifiers
FH
FT   source          1..2021
FT                   /organism="Homo sapiens"
FT                   /lab_host="DH10B-R"
FT                   /mol_type="mRNA"
FT                   /clone_lib="NIH_MGC_20"
FT                   /clone="IMAGE:4025532"
FT                   /tissue_type="Skin, melanotic melanoma."
FT                   /note="Vector: pOTB7"
FT                   /db_xref="taxon:9606"
FT   gene            <1..2021
FT                   /gene="C7orf27"
FT                   /note="synonym: MGC22916"
FT   CDS             <1..1749
FT                   /codon_start=1
FT                   /gene="C7orf27"
FT                   /product="C7orf27 protein"
FT                   /db_xref="GOA:Q6PJG6"
FT                   /db_xref="H-InvDB:HIT000090786.13"
FT                   /db_xref="HGNC:HGNC:21701"
FT                   /db_xref="InterPro:IPR000357"
FT                   /db_xref="InterPro:IPR011989"
FT                   /db_xref="InterPro:IPR016024"
FT                   /db_xref="PDB:4IFI"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q6PJG6"
FT                   /protein_id="AAH23561.2"
FT                   /translation="LSPRVACLLERDPIPAAHSFVDLLLCVARSPVFSSSDGSLWETVA
FT                   RALSCLGPTHMGPLALGILKLEHCPQALRTQAFQVLLQPLACVLKATVQAPGPPGLLDG
FT                   TADDATTVDTLLASKSSCAGLLCRTLAHLEELQPLPQRPSPWPQASLLGATVTVLRLCD
FT                   GSAAPASSVGGHLCGTLAGCVRVQRAALDFLGTLSQGTGPQELVTQALAVLLECLESPG
FT                   SSPTVLKKAFQATLRWLLSSPKTPGCSDLGPLIPQFLRELFPVLQKRLCHPCWEVRDSA
FT                   LEFLTQLSRHWGGQADFRCALLASEVPQLALQLLQDPESYVRASAVTAMGQLSSQGLHA
FT                   PTSPEHAEARQSLFLELLHILSVDSEGFPRRAVMQVFTEWLRDGHADAAQDTEQFVATV
FT                   LQAASRDLDWEVRAQGLELALVFLGQTLGPPRTHCPYAVALPEVAPAQPLTEALRALCH
FT                   VGLFDFAFCALFDCDRPVAQKSCDLLLFLRDKIASYSSLREARGSPNTASAEATLPRWR
FT                   AGEQAQPPGDQEPEAVLAMLRSLDLEGLRSTLAESSDHVEKSPQSLLQDMLATGGFLQG
FT                   DEADCY"
FT   misc_feature    907..1368
FT                   /gene="C7orf27"
FT                   /note="Cnd1; Region: Non-SMC condensin subunit,
FT                   XCAP-D2/Cnd1. Condensin is a multi-subunit protein complex
FT                   that acts as an essential regulator of chromosome
FT                   condensation. It contains both SMC (structural maintenance
FT                   of chromosomes) and non-SMC subunits. This family
FT                   represents one of the non-SMC subunits, known as Cnd1 in
FT                   Schizosaccharomyces pombe, and XCAP-D2 in Xenopus laevis.
FT                   This subunit is phosphorylated at several sites by Cdc2.
FT                   This phosphorylation process increases the supercoiling
FT                   activity of condensin"
XX
SQ   Sequence 2021 BP; 372 A; 676 C; 619 G; 354 T; 0 other;
     ctgagtcccc gcgtggcctg tctgctggag agagacccca tccccgccgc acactcgttc        60
     gtggacctgc ttctctgtgt ggctcgttct cccgtgttca gttcttccga cggcagcctg       120
     tgggagacag tggcgcgggc tctgagctgc ctgggtccca cccacatggg acccctggct       180
     ttggggatcc tgaagctcga gcactgtcca caggcactga ggacccaggc cttccaggtc       240
     cttctccagc ccctggcctg tgtcctgaag gccacggttc aggcccccgg acccccaggc       300
     ttgctggacg ggacggcaga cgatgccacg acggtggaca cactcctggc ctccaagtcg       360
     tcctgcgccg gcctcctgtg ccgcaccctg gctcacctgg aggagctgca gccgctgccc       420
     cagcgccctt caccgtggcc ccaggcgtct ctactggggg ctacagtgac tgtcctgcgg       480
     ctctgtgacg gctcggctgc ccctgcctcc agtgtggggg gccacctctg tgggaccctg       540
     gcgggctgcg tccgggtcca gcgagcagcc ctcgacttcc tggggacgct gtcacagggg       600
     acaggccccc aggagctggt gacgcaggcg cttgctgtcc tcctggagtg cctcgagagc       660
     cccggctcca gccccacggt tctgaagaag gccttccagg ccacgctcag gtggctcctg       720
     agctcaccca agacccccgg ctgctctgat ctcggccccc tcatcccgca gttcctcaga       780
     gagctgttcc ctgtgctgca gaaacgcctg tgccacccct gctgggaggt gagggactcc       840
     gccctcgagt tcctgaccca gctgagcagg cactggggag gacaggctga cttcagatgc       900
     gcactcttgg cttcagaggt gcctcagctg gccctgcagc tcctccagga ccctgagagt       960
     tatgtccgag cgagtgcagt gaccgccatg gggcagctgt ccagccaggg cctgcacgcc      1020
     cccaccagcc ctgagcatgc agaggcccgg cagagcctgt tcctggagct cctgcacatc      1080
     ctctccgtag actcggaggg cttcccacgg cgggcggtca tgcaagtctt cactgagtgg      1140
     ctgcgggacg gccacgccga cgcggcccag gacacggagc agttcgtggc cactgtgctg      1200
     caggcggcga gccgagacct ggactgggag gtccgcgccc agggcctgga gctggccctc      1260
     gtgttcctgg gccagacttt ggggccgccg cgtacccact gcccctatgc cgtggcccta      1320
     cccgaggtgg ccccagccca gccactcacc gaggcactga gggctctctg ccacgtgggg      1380
     ctctttgact tcgccttttg tgccttgttt gactgcgacc gccctgtggc gcagaagtct      1440
     tgtgacctcc ttctcttcct gagggacaag attgcttcct acagcagcct gcgggaggcc      1500
     aggggcagcc ccaacactgc ctccgcagag gccaccctgc cgaggtggcg ggcgggtgag      1560
     caggcccagc ccccagggga ccaggagcct gaggctgtgc tggccatgct caggtcccta      1620
     gacctggagg gcctgcggag cacgctggcc gagagcagcg accacgtgga aaagagtccc      1680
     cagtccctcc tgcaggacat gctggccacg ggaggcttcc tgcaggggga cgaggccgac      1740
     tgctactgag cagaaccaga gtctgccact ggggctcagg accaagggag gcagcaccat      1800
     gtccttctgt gggacactgc cagccccagg gctccagccc agcccggtgg atcctctggg      1860
     gaagccagga ccaggagaga agcaaggtca agaaatccca cagtttgatg tattaaagaa      1920
     atgacttatt tctactcaaa ataaatggca ttgaagtctt tctttaaaaa aaaaaaaaaa      1980
     aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a                          2021
//