Dbfetch

ID   AY072938; SV 1; linear; mRNA; STD; MUS; 2392 BP.
XX
AC   AY072938;
XX
DT   03-APR-2002 (Rel. 71, Created)
DT   24-SEP-2008 (Rel. 97, Last updated, Version 2)
XX
DE   Mus musculus chemokine receptor CCX CKR mRNA, complete cds, alternatively
DE   spliced.
XX
KW   .
XX
OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
XX
RN   [1]
RP   1-2392
RA   Townson J.R., Nibbs R.J.;
RT   "Characterization of mouse CCX CKR, a receptor for the
RT   lymphocyte-attracting chemokines TECK (CCL25), SLC (CCL21) and MIP-3beta
RT   (CCL19): comparison to human CCX CKR";
RL   Unpublished.
XX
RN   [2]
RP   1-2392
RA   Townson J.R., Nibbs R.J.;
RT   ;
RL   Submitted (11-JAN-2002) to the INSDC.
RL   CRC Beatson Laboratories, The Beatson Institute for Cancer Research,
RL   Garscube Estate, Switchback Road, Bearsden, Glasgow, Scotland G61 1BD, UK
XX
DR   MD5; 9b65bb30fc8944f91c537a33df355d0c.
DR   Ensembl-Gn; ENSMUSG00000079355; mus_musculus.
DR   Ensembl-Tr; ENSMUST00000076147; mus_musculus.
DR   Ensembl-Tr; ENSMUST00000188000; mus_musculus.
DR   Ensembl-Tr; ENSMUST00000219146; mus_musculus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2392
FT                   /organism="Mus musculus"
FT                   /strain="129/SvJ"
FT                   /mol_type="mRNA"
FT                   /sex="female"
FT                   /db_xref="taxon:10090"
FT   5'UTR           1..792
FT                   /note="alternatively spliced"
FT   CDS             793..1845
FT                   /codon_start=1
FT                   /product="chemokine receptor CCX CKR"
FT                   /note="receptor for chemokines CCL19, CCL21 and CCL25"
FT                   /db_xref="GOA:Q924I3"
FT                   /db_xref="InterPro:IPR000276"
FT                   /db_xref="InterPro:IPR000355"
FT                   /db_xref="InterPro:IPR005383"
FT                   /db_xref="InterPro:IPR017452"
FT                   /db_xref="MGI:MGI:2181676"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q924I3"
FT                   /protein_id="AAL68962.1"
FT                   /translation="MALELNQSAEYYYEENEMNYTHDYSQYEVICIKEEVRQFAKVFLP
FT                   AFFTVAFVTGLAGNSVVVAIYAYYKKQRTKTDVYILNLAVADLLLLITLPFWAVNAVHG
FT                   WILGKMMCKVTSALYTVNFVSGMQFLACISIDRYWAITKAPSQSGAGRPCWIICCCVWM
FT                   AAILLSIPQLVFYTVNQNARCTPIFPHHLGTSLKASIQMLEIGIGFVVPFLIMGVCYAS
FT                   TARALIKMPNIKKSRPLRVLLAVVVVFIVTQLPYNVVKFCQAIDAIYLLITSCDMSKRM
FT                   DVAIQLTESIALFHSCLNPILYVFMGASFKNYIMKVAKKYGSWRRQRQNVEEIPFDSEG
FT                   PTEPTSSFTI"
FT   3'UTR           1845..>2392
XX
SQ   Sequence 2392 BP; 665 A; 569 C; 576 G; 582 T; 0 other;
     acaggtcatg tgtataaagt gaatgctaac ccattagaca ccagactcaa tggcagttat        60
     ggggtttcct atttacctca cgtctgtgtg atccttactt aacattataa aacccagtga       120
     tcgaaataga tgctaaaatc tttaccatgg gtgaataatt agccttgtgc tcaaactact       180
     caagagatgt gagatgtaag ttttgagctg gtcaagagtg tgccccgggt tgctccatca       240
     catcctggct gtcaaccgtc tggcttggtc ctgaagctcc atcttggcga tcgctgagag       300
     gtggacttcg tcagggcccg tctgccaagc gcagggtgcg tatgatggcg tacctgaaag       360
     aatggggtca gagttatcag agagcacaac acccgtcatg tcatgctcac tccaaaccaa       420
     ggaaaaggaa catgaagaga aaggccaaag gcttctgaag ctgccatttt aaagatctca       480
     gctcagggag attcaagatg gctacccaga ggcgaagctg agtggaaacg gatgatcctg       540
     cagtttggga gccagactgg aactccctcc atctgcatcc caggacattt aggaatttgg       600
     atggactcca caggaaggtt ttccagagca cttaatcaag ggctccggag gctacgtttc       660
     aggaaagctc tcttggatcc aagataaagg cggggtgtaa aatagaaaac aagagttgcc       720
     tgactcagag aggtcctctg atttcctctg cgctccagac ggcacctctc ccagcttaaa       780
     cagctcggta ccatggctct ggagctgaac cagtcagcgg aatactatta tgaggagaat       840
     gagatgaact acactcacga ctacagccag tacgaagtga tctgcataaa agaagaggtc       900
     aggcagttcg caaaagtctt cctgcctgcc ttcttcacag tggcctttgt cactgggctc       960
     gcagggaact ccgtagttgt ggcgatttac gcctattaca agaagcagag gaccaagacc      1020
     gatgtgtaca tcctgaacct ggctgtagca gacttgttac ttctgatcac gctgcctttc      1080
     tgggcagtta atgcagttca cggatggatt ctaggcaaaa tgatgtgcaa agtaacgtca      1140
     gccctgtaca cggtaaactt tgtctctggg atgcagttcc tggcttgtat cagcattgac      1200
     agatattggg caattaccaa agcccccagc caatcaggag cggggagacc ctgttggatc      1260
     atctgttgct gtgtgtggat ggccgccatc ttgctgagca taccccagct ggttttttac      1320
     acagtgaatc agaatgctag gtgcactccc atctttcccc accacctagg aacatccctg      1380
     aaagcatcca ttcagatgct ggaaatcggc atcggctttg tggtcccgtt tctcatcatg      1440
     ggcgtgtgct atgccagtac cgccagggcg ctcatcaaga tgcccaacat taaaaagtct      1500
     cgccccctca gggttctgct cgcggtggtg gtggttttca ttgtcaccca gctgccctat      1560
     aacgttgtta agttctgcca agccatagat gccatctacc tgctgatcac cagctgcgat      1620
     atgagcaaac gcatggatgt cgccatccaa ctcacagaga gcatcgcgct cttccacagc      1680
     tgcctcaacc ccatcctgta tgtcttcatg ggggcctcct tcaaaaacta tatcatgaaa      1740
     gtggccaaga aatatggatc ctggagaaga cagagacaga acgtggaaga aattcctttt      1800
     gattctgagg gtcctacaga gccaaccagt tcttttacca tttaaatata aaactgctct      1860
     ctgcctctgc tttttgctta gacacacaca cacacacaca cacacacaca cacacacaaa      1920
     gtgatgtttc ctcctcaaat aaaatatttg tgttacaccg agacccaacc atcaacaaat      1980
     actgttgttg caatttataa caaagaagga gtaaggggtg gggcagggta aggaagacag      2040
     acgccagaga gtaaacaagt gggcaaagtg tggaaactaa atctaatgac aggaaaacag      2100
     cttggcagga gggagaaaca acgcattgtg ccacaaagag gaagtctgtg tgtgtgtgtg      2160
     tgtgtgatgg gagggggggt gtgtgcatct tcaccacagt ggtgggtatt caaatctgac      2220
     agcaactggt attctgtaat ataaaccctt ggttatgcgt gcccacgacc attctgtact      2280
     atctctggta cttcctgtga gtaaacaact tcataataaa aggtaaaaag aagaacatca      2340
     tgctgtgagc ctagcaacct aaaccaattc ataaaaaact tatgcttaga ga              2392
//