Dbfetch
ID AL354615; SV 1; linear; mRNA; STD; HUM; 3840 BP. XX AC AL354615; XX DT 02-MAY-2000 (Rel. 63, Created) DT 15-OCT-2008 (Rel. 97, Last updated, Version 3) XX DE Novel human gene mapping to chomosome 1 XX KW . XX OS Homo sapiens (human) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; OC Homo. XX RN [1] RP 1-3840 RA Rhodes S., Huckle E.; RT ; RL Submitted (27-APR-2000) to the INSDC. RL E-mail contact: humquery@sanger.ac.uk XX DR MD5; 0a51708fa69cd645e6a1150e0405ef6e. DR Ensembl-Gn; ENSG00000159363; homo_sapiens. DR Ensembl-Tr; ENST00000326735; homo_sapiens. DR Ensembl-Tr; ENST00000341676; homo_sapiens. DR Ensembl-Tr; ENST00000452699; homo_sapiens. DR EuropePMC; PMC4527104; 26245297. XX CC This cDNA sequence was assembled from public domain ESTs and single CC pass sequencing reads from expressed DNA templates, aligned to the CC genomic DNA sequence from the bacterial clone 37C10 (AL049569). CC The EST sequences listed match this sequence with an identity CC of at least 95% between the coordinates shown. CC Further information can be found at http://www.sanger.ac.uk/HGP/Chr1/ CC Experimentally determined gene CC Sanger Centre name : dJ37C10.C1.3 XX FH Key Location/Qualifiers FH FT source 1..3840 FT /organism="Homo sapiens" FT /chromosome="1" FT /map="1p36" FT /mol_type="mRNA" FT /db_xref="taxon:9606" FT exon 1..44 FT /number=1 FT CDS 35..3577 FT /product="hypothetical protein" FT /db_xref="GOA:Q9NQ11" FT /db_xref="H-InvDB:HIT000250333.13" FT /db_xref="HGNC:HGNC:30213" FT /db_xref="InterPro:IPR001757" FT /db_xref="InterPro:IPR006544" FT /db_xref="InterPro:IPR008250" FT /db_xref="InterPro:IPR018303" FT /db_xref="InterPro:IPR023214" FT /db_xref="InterPro:IPR023298" FT /db_xref="InterPro:IPR023299" FT /db_xref="InterPro:IPR036412" FT /db_xref="UniProtKB/Swiss-Prot:Q9NQ11" FT /protein_id="CAB89728.1" FT /translation="MSADSSPLVGSTPTGYGTLTIGTSIDPLSSSVSSVRLSGYCGSPW FT RVIGYHVVVWMMAGIPLLLFRWKPLWGVRLRLRPCNLAHAETLVIEIRDKEDSSWQLFT FT VQVQTEAIGEGSLEPSPQSQAEDGRSQAAVGAVPEGAWKDTAQLHKSEEAVSVGQKRVL FT RYYLFQGQRYIWIETQQAFYQVSLLDHGRSCDDVHRSRHGLSLQDQMVRKAIYGPNVIS FT IPVKSYPQLLVDEALNPYYGFQAFSIALWLADHYYWYALCIFLISSISICLSLYKTRKQ FT SQTLRDMVKLSMRVCVCRPGGEEEWVDSSELVPGDCLVLPQEGGLMPCDAALVAGECMV FT NESSLTGESIPVLKTALPEGLGPYCAETHRRHTLFCGTLILQARAYVGPHVLAVVTRTG FT FCTAKGGLVSSILHPRPINFKFYKHSMKFVAALSVLALLGTIYSIFILYRNRVPLNEIV FT IRALDLVTVVVPPALPAAMTVCTLYAQSRLRRQGIFCIHPLRINLGGKLQLVCFDKTGT FT LTEDGLDVMGVVPLKGQAFLPLVPEPRRLPVGPLLRALATCHALSRLQDTPVGDPMDLK FT MVESTGWVLEEEPAADSAFGTQVLAVMRPPLWEPQLQAMEEPPVPVSVLHRFPFSSALQ FT RMSVVVAWPGATQPEAYVKGSPELVAGLCNPETVPTDFAQMLQSYTAAGYRVVALASKP FT LPTVPSLEAAQQLTRDTVEGDLSLLGLLVMRNLLKPQTTPVIQALRRTRIRAVMVTGDN FT LQTAVTVARGCGMVAPQEHLIIVHATHPERGQPASLEFLPMESPTAVNGVKDPDQAASY FT TVEPDPRSRHLALSGPTFGIIVKHFPKLLPKVLVQGTVFARMAPEQKTELVCELQKLQY FT CVGMCGDGANDCGALKAADVGISLSQAEASVVSPFTSSMASIECVPMVIREGRCSLDTS FT FSVFKYMALYSLTQFISVLILYTINTNLGDLQFLAIDLVITTTVAVLMSRTGPALVLGR FT VRPPGALLSVPVLSSLLLQMVLVTGVQLGGYFLTLAQPWFVPLNRTVAAPDNLPNYENT FT VVFSLSSFQYLILAAAVSKGAPFRRPLYTNVPFLVALALLSSVLVGLVLVPGLLQGPLA FT LRNITDTGFKLLLLGLVTLNFVGAFMLESVLDQCLPACLRRLRPKRASKKRFKQLEREL FT AEQPWPPLPAGPLR" FT exon 45..139 FT /number=2 FT exon 140..322 FT /number=3 FT misc_feature complement(join(321..366,365..381)) FT /note="matches EST AA601386 from clone IMAGE:1100856" FT exon 323..381 FT /number=4 FT exon 382..511 FT /number=5 FT exon 512..591 FT /number=6 FT misc_feature 521..591 FT /note="matches EST AA367383" FT misc_feature 582..957 FT /note="matches EST AW503046 from clone IMAGE:3073988" FT misc_feature 582..1055 FT /note="matches EST AW503042 from clone IMAGE:3073970" FT exon 592..669 FT /number=7 FT exon 670..739 FT /number=8 FT exon 740..874 FT /number=9 FT exon 875..941 FT /number=10 FT exon 942..1073 FT /number=11 FT misc_feature 1072..1235 FT /note="matches EST AA326792" FT exon 1074..1229 FT /number=12 FT misc_feature 1159..1416 FT /note="matches EST T19151 from clone a10004" FT exon 1230..1340 FT /number=13 FT exon 1341..1387 FT /number=14 FT exon 1388..1576 FT /number=15 FT misc_feature 1528..1913 FT /note="matches EST AW247062 from clone IMAGE:2822594" FT exon 1577..1783 FT /number=16 FT misc_feature 1767..1975 FT /note="matches EST T09153 from clone HIBBP79" FT exon 1784..1879 FT /number=17 FT exon 1880..2039 FT /number=18 FT exon 2040..2160 FT /number=19 FT exon 2161..2285 FT /number=20 FT exon 2286..2446 FT /number=21 FT misc_feature join(2287..2459,2561..2956) FT /note="matches EST AW163138 from clone IMAGE:2783726" FT exon 2447..2563 FT /number=22 FT exon 2564..2643 FT /number=23 FT misc_feature 2643..2886 FT /note="matches EST AA359097" FT exon 2644..2796 FT /number=24 FT exon 2797..2893 FT /number=25 FT exon 2894..3117 FT /number=26 FT exon 3118..3269 FT /number=27 FT misc_feature complement(join(3179..3208,3231..3834)) FT /note="matches EST AI694453 from clone IMAGE:2338239" FT exon 3270..3439 FT /number=28 FT misc_feature complement(join(3393..3472,3558..3805,3806..3840)) FT /note="matches EST AA977749 from clone IMAGE:1589627" FT misc_feature join(3421..3488,3493..3702) FT /note="matches EST H20364 from clone IMAGE:172875" FT exon 3440..3840 FT /number=29 FT misc_feature complement(3476..3840) FT /note="matches EST AI015711 from clone IMAGE:1636139" FT misc_feature complement(join(3508..3644,3636..3824)) FT /note="matches EST AI560050 from clone IMAGE:2211121" FT misc_feature complement(3540..3840) FT /note="matches EST AI061266 from clone IMAGE:1699709" FT misc_feature complement(3558..3840) FT /note="matches EST AI380589 from clone IMAGE:2107078" FT misc_feature complement(3559..3840) FT /note="matches EST AI334403 from clone IMAGE:1933609" FT misc_feature complement(3582..3840) FT /note="matches EST AW081719 from clone IMAGE:2587072" FT misc_feature complement(3602..3840) FT /note="matches EST R58916" FT misc_feature complement(3679..3840) FT /note="matches EST AW591743 from clone IMAGE:2793472" FT misc_feature complement(3700..3840) FT /note="matches EST AI887158 from clone IMAGE:2438061" FT misc_feature complement(3728..3840) FT /note="matches EST AI954171 from clone IMAGE:2549985" XX SQ Sequence 3840 BP; 682 A; 1277 C; 1162 G; 719 T; 0 other; gcgccggggc cggcgatgag cgcgaggagc cggcatgagc gcagacagca gccctctcgt 60 gggcagcacg cccaccggtt atgggaccct gacgataggg acatcaatag atcccctcag 120 ctcctcagtt tcatccgtga ggctcagcgg ctactgtggc agtccatgga gggtcatcgg 180 ctatcacgtc gtggtctgga tgatggctgg gatccctttg ctgctcttcc gttggaagcc 240 cctgtggggg gtgcggctgc ggctccggcc ctgcaacctg gcccacgccg aaacactcgt 300 tatcgaaata agagacaaag aggatagttc ctggcagctc ttcactgtcc aggtgcagac 360 tgaggccatc ggcgagggca gcctggagcc gtccccacag tcccaggcag aggatggccg 420 gagccaggcg gcagttgggg cggtaccaga gggtgcctgg aaggatacgg cccagctcca 480 caagagcgag gaggcggtga gtgtcggaca gaagcgggtg ctgcggtatt acctcttcca 540 gggccagcgc tatatctgga tcgagaccca gcaagccttc taccaggtca gcctcctgga 600 ccatggccgc tcttgtgacg acgtccaccg ctcccgccat ggcctcagcc tccaggacca 660 aatggtgagg aaggccattt acggccccaa cgtgatcagc ataccggtca agtcctaccc 720 ccagctgctg gtggacgagg cactgaaccc ctactatggg ttccaggcct tcagcatcgc 780 gctgtggctg gctgaccact actactggta cgccctgtgc atcttcctca tttcctccat 840 ctccatctgc ctgtcgctgt acaagaccag aaagcaaagc cagactctaa gggacatggt 900 caagttgtcc atgcgggtgt gcgtgtgccg gccaggggga gaggaagagt gggtggactc 960 cagtgagcta gtgcccggag actgcctggt gctgccccag gagggtgggc tgatgccctg 1020 tgatgccgcc ctggtggccg gcgagtgcat ggtgaatgag agctctctga caggagagag 1080 cattccagtg ctgaagacgg cactgccgga ggggctgggg ccctactgtg cagagacaca 1140 ccggcggcac acactcttct gcgggaccct catcttgcag gcccgggcct atgtgggacc 1200 gcacgtcctg gcagtggtga cccgcacagg gttctgcacg gcaaaagggg gcctggtgag 1260 ctccatcttg cacccccggc ccatcaactt caagttctat aaacacagca tgaagtttgt 1320 ggctgccctc tctgtcctgg ctctcctcgg caccatctac agcatcttca tcctctaccg 1380 aaaccgggtg cctctgaatg agattgtaat ccgggctctc gacctggtga ccgtggtggt 1440 gccacctgcc ctgcctgctg ccatgactgt gtgcacgctc tacgcccaga gccgactgcg 1500 gagacagggc attttctgca tccacccact gcgcatcaac ctggggggca agctgcagct 1560 ggtgtgtttc gacaagacgg gcaccctcac tgaggacggc ttagacgtga tgggggtggt 1620 gcccctgaag gggcaggcat tcctgcccct ggtcccagag cctcgccgcc tgcctgtggg 1680 gcccctgctc cgagcactgg ccacctgcca tgccctcagc cggctccagg acacccccgt 1740 gggcgacccc atggacttga agatggtgga gtctactggc tgggtcctgg aggaagagcc 1800 ggctgcagac tcagcatttg ggacccaggt cttggcagtg atgagacccc cactttggga 1860 gccccagctg caggcaatgg aggagccccc ggtgccagtc agcgtcctcc accgcttccc 1920 cttctcttcg gctctgcagc gcatgagtgt ggtggtggcg tggccagggg ccactcagcc 1980 cgaggcctac gtcaaaggct ccccggagct ggtggcaggg ctctgcaacc ccgagacagt 2040 gcccaccgac ttcgcccaga tgctgcagag ctatacagct gctggctacc gtgtcgtggc 2100 cctggccagc aagccactgc ccactgtgcc cagcctggag gcagcccagc aactgacgag 2160 ggacactgtg gaaggagacc tgagcctcct ggggctgctg gtcatgagga acctactgaa 2220 gccgcagaca acgccagtta tccaggctct gcgaaggacc cgcatccgcg ccgtcatggt 2280 gacaggggac aacctgcaga cagcggtgac tgtggcccgg ggctgtggca tggtggcccc 2340 ccaggagcat ctgatcatcg tccacgccac ccaccctgag cggggtcagc ctgcctctct 2400 cgagttcctg ccgatggagt cccccacagc cgtgaatggc gttaaggatc ctgaccaggc 2460 tgcaagctac accgtggagc cagacccccg atccaggcac ctggccctca gcgggcccac 2520 ctttggtatc attgtgaagc acttccccaa gctgctgccc aaggtcctgg tccagggcac 2580 tgtctttgcc cgcatggccc ctgagcagaa gacagagctg gtgtgcgagc tacagaagct 2640 tcagtactgc gtgggcatgt gcggagacgg cgccaatgac tgtggggccc tgaaggcggc 2700 tgatgtcggc atctcgctgt cccaggcaga agcctcagtg gtctcaccct tcacctcgag 2760 catggccagt attgagtgcg tgcccatggt catcagggag gggcgctgtt cccttgacac 2820 ttcgttcagc gtcttcaagt acatggctct gtacagcctg acccagttca tctccgtcct 2880 gatcctctac acgatcaaca ccaacctggg tgacctgcag ttcctggcca tcgacctggt 2940 catcaccacc acagtggcag tgctcatgag ccgcacgggg ccagcgctgg tcctgggacg 3000 ggtgcggcca ccgggggcgc tgctcagcgt gcccgtgctc agcagcctgc tgctgcagat 3060 ggtcctggtg accggcgtgc agctaggggg ctacttcctg accctggccc agccatggtt 3120 cgtgcctctg aacaggacag tggccgcacc agacaacctg cccaactacg agaacaccgt 3180 ggtcttctct ctgtccagct tccagtacct catcctggct gcagccgtgt ccaagggggc 3240 gcccttccgc cggccgctct acaccaatgt gcccttcctg gtggccctgg cgctcctgag 3300 ctccgtcctg gtgggccttg tcctggtccc cggcctcctg caggggccgc tggcgctgag 3360 gaacatcact gacaccggct tcaagctgct gctgctgggt ctggtcaccc tcaacttcgt 3420 gggggccttc atgctggaga gcgtgctaga ccagtgcctc cccgcctgcc tgcgccgcct 3480 ccggcccaag cgggcctcca agaagcgctt caagcagctg gaacgagagc tggccgagca 3540 gccctggccg ccgctgcccg ccggccccct gaggtagtgc aggcccacgg gcaccccaga 3600 cactggaact ccctgcctct gagccaccaa ctggacccct ctccagcaac accaccgcca 3660 ccacctccca catccctgag gttggcgact gtctacactc ctcccccgag accaccccca 3720 ccctggggaa gcgttgacta ctgtccccta ccttggacca tcccgcgtag gggtggcagc 3780 ccccagctcc cctcagtgct gctgtcagtg tagcaaataa agtcatgata ttttcctggc 3840 //