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EBI DbfetchID AK035512; SV 1; linear; mRNA; HTC; MUS; 2776 BP. XX AC AK035512; XX DT 18-DEC-2002 (Rel. 74, Created) DT 07-OCT-2010 (Rel. 106, Last updated, Version 14) XX DE Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched DE library, clone:9530058K19 product:similar to CALCIUM-ACTIVATED CHLORIDE DE CHANNEL-2 [Homo sapiens], full insert sequence. XX KW CAP trapper; HTC; HTC_FLI. XX OS Mus musculus (house mouse) OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; OC Muridae; Murinae; Mus; Mus. XX RN [1] RP 1-2776 RA Adachi J., Aizawa K., Akimura T., Arakawa T., Bono H., Carninci P., RA Fukuda S., Furuno M., Hanagaki T., Hara A., Hashizume W., Hayashida K., RA Hayatsu N., Hiramoto K., Hiraoka T., Hirozane T., Hori F., Imotani K., RA Ishii Y., Itoh M., Kagawa I., Kasukawa T., Katoh H., Kawai J., Kojima Y., RA Kondo S., Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., RA Miyazaki A., Murata M., Nakamura M., Nishi K., Nomura K., Numazaki R., RA Ohno M., Ohsato N., Okazaki Y., Saito R., Saitoh H., Sakai C., Sakai K., RA Sakazume N., Sano H., Sasaki D., Shibata K., Shinagawa A., Shiraki T., RA Sogabe Y., Tagami M., Tagawa A., Takahashi F., Takaku-Akahira S., RA Takeda Y., Tanaka T., Tomaru A., Toya T., Yasunishi A., Muramatsu M., RA Hayashizaki Y.; RT ; RL Submitted (16-JUL-2001) to the INSDC. RL Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical RL Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22 RL Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL RL :http://www.osc.riken.jp/ XX RN [2] RX PUBMED; 16141072. RG The FANTOM Consortium, Riken Genome Exploration Research Group and Genome RG Science Group (Genome Network Project Core Group) RA ; RT "The Transcriptional Landscape of the Mammalian Genome"; RL Science 309(5740):1559-1563(2005). XX RN [3] RX DOI; 10.1126/science.1112009. RX PUBMED; 16141073. RG RIKEN Genome Exploration Research Group and Genome Science Group (Genome RG Network Project Core Group) and the FANTOM Consortium RA ; RT "Antisense Transcription in the Mammalian Transcriptome"; RL Science 309(5740):1564-1566(2005). XX RN [4] RX PUBMED; 12466851. RG The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase RG I and II Team RA ; RT "Analysis of the mouse transcriptome based on functional annotation of RT 60,770 full-length cDNAs"; RL Nature 420(6915):563-573(2002). XX RN [5] RX PUBMED; 11217851. RG The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM RG Consortium RA ; RT "Functional annotation of a full-length mouse cDNA collection"; RL Nature 409(6821):685-690(2001). XX RN [6] RX DOI; 10.1016/S0076-6879(99)03004-9. RX PUBMED; 10349636. RA Carninci P., Hayashizaki Y.; RT "High-efficiency full-length cDNA cloning"; RL Meth. Enzymol. 303:19-44(1999). XX RN [7] RX DOI; 10.1101/gr.145100. RX PUBMED; 11042159. RA Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M., RA Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.; RT "Normalization and subtraction of cap-trapper-selected cDNAs to prepare RT full-length cDNA libraries for rapid discovery of new genes"; RL Genome Res. 10(10):1617-1630(2000). XX RN [8] RX DOI; 10.1101/gr.152600. RX PUBMED; 11076861. RA Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P., RA Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N., RA Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R., RA Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S., RA Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y., RA Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y., RA Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.; RT "RIKEN integrated sequence analysis (RISA) system--384-format sequencing RT pipeline with 384 multicapillary sequencer"; RL Genome Res. 10(11):1757-1771(2000). XX DR Ensembl-Gn; ENSMUSG00000036960; mus_musculus. DR Ensembl-Tr; ENSMUST00000040465; mus_musculus. XX CC cDNA library was prepared and sequenced in Mouse Genome CC Encyclopedia Project of Genome Exploration Research Group in Riken CC Genomic Sciences Center and Genome Science Laboratory in RIKEN. CC Division of Experimental Animal Research in Riken contributed to CC prepare mouse tissues. CC Please visit our web site for further details. CC URL:http://www.osc.riken.jp/ CC URL:http://fantom.gsc.riken.jp/ CC clone information is available at: CC http://fantom.gsc.riken.jp/3/db/annotate/ CC main.cgi?masterid=9530058K19 XX FH Key Location/Qualifiers FH FT source 1..2776 FT /organism="Mus musculus" FT /strain="C57BL/6J" FT /mol_type="mRNA" FT /sex="male" FT /dev_stage="adult" FT /clone_lib="RIKEN full-length enriched mouse cDNA library" FT /clone="9530058K19" FT /tissue_type="urinary bladder" FT /db_xref="taxon:10090" FT CDS 145..2169 FT /codon_start=1 FT /transl_table=1 FT /note="putative" FT /note="similar to CALCIUM-ACTIVATED CHLORIDE CHANNEL-2 FT [Homo sapiens] (SPTR|Q9Y6N2, evidence: FASTY, 70.4%ID, FT 84.5%length, match=2254)" FT /db_xref="GOA:Q8BG22" FT /db_xref="InterPro:IPR002035" FT /db_xref="InterPro:IPR004727" FT /db_xref="InterPro:IPR013642" FT /db_xref="InterPro:IPR015394" FT /db_xref="MGI:MGI:2139758" FT /db_xref="UniProtKB/Swiss-Prot:Q8BG22" FT /protein_id="BAC29086.1" FT /translation="MTHRDSTGPVIGLKLVTLLFTLSPELLFLGAGLKLKENGYDGLLV FT AINPRVPEDLKLITNIKEMITEASFYLFNATKRRVFFRNVQILVPATWTDHNYSRVRQE FT SYDKANVIVAEQSEEHGDDPYTLQHRGCGQEGRYIHFTPSFLLNDELAAGYGARGRVFV FT HEWAHLRWGVFDEYNNDKPFYVNGRNEIQVTRCSSDITGVFVCEKGLCPHEDCIISKIF FT REGCTFLYNSTQNATGSIMFMPSLPSVVEFCNESTHNQEAPNLQNQVCSLRSTWDVITA FT SSDLNHSLPVHGVGLPAPPTFSLLQAGDRVVCLVIDVSRKMAEGDRLLRLQQAAELYLM FT QVVEAHTFVGIVTFDSKGEIRASLQQIYSDDDRKLLVSYLPTAVSTDAETNICAGVKKG FT FEVVEERNGRADGSVLILVTSGADEHIANCLLTSMNSGSTIHSMALGSSAARKVGELSR FT LTGGLKFFIPDKFTSNGMTEAFVRISSGTGDIFQQSLQVESVCETVQPQHQLADTMTVD FT SAVGNDTLFLVTWQTGGPPEIALLDPSGRKYNTGDFIINLAFRTASLKIPGTAKHGHWT FT YTLNNTHHSPQALKVTVASRASSLAMSPATLEAFVERDSTYFPQPVIIYANVRKGLHPI FT LNATVVATVEPEAGDPVVLQLLDGGAGADVIRNDGIYSR" XX SQ Sequence 2776 BP; 745 A; 679 C; 663 G; 689 T; 0 other; agagggtttt caaagaaggc aactcctcat catgtattgt aagaccttct aagttccgaa 60 agaagccagc tgcttccaca ttgatcagct gactcaaggt acccagcagg ctccccgtga 120 ataaaccaga ggtttcactg caagatgacc cacagggaca gcacaggacc tgtcatcggg 180 ctgaaacttg tgacccttct gttcacccta agtccagaac ttctgttcct gggagctgga 240 ttgaagctga aagagaatgg ctatgatgga ttgcttgttg ccatcaatcc ccgggtaccc 300 gaggatctga agctgattac aaacattaag gaaatgataa ccgaagcttc cttttacctg 360 ttcaatgcga ccaagaggag ggtgtttttc agaaatgtac agattttagt acctgccact 420 tggacggatc ataattacag tagagtaaga caagaatcct atgacaaggc aaatgtcata 480 gtggctgagc agagtgagga acacggagat gatccctaca ccctacagca cagagggtgt 540 gggcaagagg ggagatacat ccacttcacc cccagcttcc tactcaacga tgagttagcc 600 gcaggctatg gtgcgcgagg cagagtgttt gtccacgagt gggcccatct ccgctggggt 660 gtgttcgatg aatataacaa cgacaaaccg ttctacgtga atggacggaa tgagattcaa 720 gtcaccaggt gttcatctga cattacaggc gtttttgtgt gtgaaaaggg cctctgcccc 780 catgaagact gcattattag caagattttt agggaaggat gcacattcct ctacaacagc 840 acccagaatg caactggatc aataatgttc atgccaagtt taccttctgt ggttgaattc 900 tgtaacgaaa gtacacacaa ccaagaagct ccaaacctcc agaaccaagt gtgcagcctc 960 agaagcactt gggacgtgat cacagcctcc tccgacctga accatagcct ccccgtgcat 1020 ggggttggac ttccagcccc tcccacgttc tccctcttgc aggctggtga ccgagtggtc 1080 tgcttagtga ttgatgtgtc caggaagatg gcagagggag acagactgct ccgacttcaa 1140 caagcagccg aactgtactt gatgcaggtt gtcgaagctc acactttcgt gggcattgtc 1200 acttttgata gcaaaggaga aatccgagcc tcgctgcagc aaatttacag tgacgatgac 1260 cggaagctgc tggtttcata cctgccgacc gccgtgtcca ctgacgcaga aacgaacatc 1320 tgtgcagggg ttaagaaagg ctttgaggtg gttgaggagc ggaatggaag agctgacggc 1380 tctgtcctga tattagtgac cagtggagca gatgaacaca ttgccaactg cctgctcacc 1440 tcgatgaaca gtggatccac cattcactcc atggccctgg gttcctctgc agccagaaaa 1500 gtgggggaat tatcacgtct tacaggaggt ctaaagttct tcattccaga taaatttact 1560 tctaatggaa tgactgaagc tttcgttcga atctcttctg gaacaggaga cattttccag 1620 caaagcttac aggttgagag cgtgtgcgaa actgtgcaac cccagcacca gctggcggat 1680 actatgactg tggatagcgc cgtgggcaat gacacacttt ttctagtcac gtggcagact 1740 ggtggccccc ctgagattgc attattggat cctagcggaa gaaaatacaa cactggtgac 1800 tttatcatca acctggcctt tcggacagcc agccttaaga ttccagggac agctaagcat 1860 gggcactgga cttacacgct gaacaacacc caccattctc cccaagctct gaaagtgaca 1920 gtggcctctc gtgcctccag cctggccatg tccccagcca ctctggaagc ctttgtggaa 1980 agagacagca cctattttcc tcagccagtg atcatttatg cgaatgtgag gaaaggtctg 2040 catcccattc tcaatgccac cgtggtggcg acagtggaac cagaggctgg agatcccgtt 2100 gtactgcaac ttttggatgg cggagcaggt gcagatgtta taagaaatga tgggatttac 2160 tccagataat attcaaatga atgctcccaa aaacttgggc cacagacctg tgaaggagag 2220 gtggggcttc agtcgagtga gctcgggagg ctccttctcc gtgctgggag tcccagacgg 2280 cccccaccct gacatgtttc caccgtgcaa aattactgac ctggaagcca tgaaagtgga 2340 agacgacgtc gtcctctctt ggacggcacc tggggaagac ttcgatcagg ggcaaagtag 2400 gcttgctgat ttgtttcata agtacctttc cacagacagt atcttcccaa cacccccccc 2460 cccactgtgt gtgtgtagtc attttttatt gttttccata tcaacattac aaaaagcttc 2520 actagttaaa gcaaaagcta gagacagctc aataacacaa catgaacttt acacaattac 2580 tcatagggag gatgacatca tttttttgat tcttgctttc aaaaaaatat caagtgctcc 2640 tggctcacat tttagcatga gtctttacat tgcaacttgg tattcagtga tttctcacac 2700 gtatattcct tgatagtttg acttttgtgg ttattttcat tactaatctt caccaactaa 2760 aaaccttata caaatt 2776 // |
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