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EBI Dbfetch

ID   AK004985; SV 1; linear; mRNA; HTC; MUS; 2803 BP.
XX
AC   AK004985;
XX
DT   08-FEB-2001 (Rel. 66, Created)
DT   07-OCT-2010 (Rel. 106, Last updated, Version 20)
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DE   Mus musculus adult male liver cDNA, RIKEN full-length enriched library,
DE   clone:1300013E02 product:fatty acid amide hydrolase, full insert sequence.
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KW   CAP trapper; HTC; HTC_FLI.
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OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Mus; Mus.
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RN   [1]
RP   1-2803
RA   Adachi J., Aizawa K., Akahira S., Akimura T., Arai A., Aono H., Arakawa T.,
RA   Bono H., Carninci P., Fukuda S., Fukunishi Y., Furuno M., Hanagaki T.,
RA   Hara A., Hayatsu N., Hiramoto K., Hiraoka T., Hori F., Imotani K.,
RA   Ishii Y., Itoh M., Izawa M., Kasukawa T., Kato H., Kawai J., Kojima Y.,
RA   Konno H., Kouda M., Koya S., Kurihara C., Matsuyama T., Miyazaki A.,
RA   Nishi K., Nomura K., Numazaki R., Ohno M., Okazaki Y., Okido T., Owa C.,
RA   Saito H., Saito R., Sakai C., Sakai K., Sano H., Sasaki D., Shibata K.,
RA   Shibata Y., Shinagawa A., Shiraki T., Sogabe Y., Suzuki H., Tagami M.,
RA   Tagawa A., Takahashi F., Tanaka T., Tejima Y., Toya T., Yamamura T.,
RA   Yasunishi A., Yoshida K., Yoshino M., Muramatsu M., Hayashizaki Y.;
RT   ;
RL   Submitted (10-JUL-2000) to the INSDC.
RL   Contact:Yoshihide Hayashizaki The Institute of Physical and Chemical
RL   Research (RIKEN), Omics Science Center, RIKEN Yokohama Institute; 1-7-22
RL   Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan URL   
RL   :http://www.osc.riken.jp/
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RN   [2]
RX   PUBMED; 16141072.
RG   The FANTOM Consortium, Riken Genome Exploration Research Group and Genome
RG   Science Group (Genome Network Project Core Group)
RA   ;
RT   "The Transcriptional Landscape of the Mammalian Genome";
RL   Science 309(5740):1559-1563(2005).
XX
RN   [3]
RX   DOI; 10.1126/science.1112009.
RX   PUBMED; 16141073.
RG   RIKEN Genome Exploration Research Group and Genome Science Group (Genome
RG   Network Project Core Group) and the FANTOM Consortium
RA   ;
RT   "Antisense Transcription in the Mammalian Transcriptome";
RL   Science 309(5740):1564-1566(2005).
XX
RN   [4]
RX   PUBMED; 12466851.
RG   The FANTOM Consortium and the RIKEN Genome Exploration Research Group Phase
RG   I and II Team
RA   ;
RT   "Analysis of the mouse transcriptome based on functional annotation of
RT   60,770 full-length cDNAs";
RL   Nature 420(6915):563-573(2002).
XX
RN   [5]
RX   PUBMED; 11217851.
RG   The RIKEN Genome Exploration Research Group Phase II Team and the FANTOM
RG   Consortium
RA   ;
RT   "Functional annotation of a full-length mouse cDNA collection";
RL   Nature 409(6821):685-690(2001).
XX
RN   [6]
RX   DOI; 10.1016/S0076-6879(99)03004-9.
RX   PUBMED; 10349636.
RA   Carninci P., Hayashizaki Y.;
RT   "High-efficiency full-length cDNA cloning";
RL   Meth. Enzymol. 303:19-44(1999).
XX
RN   [7]
RX   DOI; 10.1101/gr.145100.
RX   PUBMED; 11042159.
RA   Carninci P., Shibata Y., Hayatsu N., Sugahara Y., Shibata K., Itoh M.,
RA   Konno H., Okazaki Y., Muramatsu M., Hayashizaki Y.;
RT   "Normalization and subtraction of cap-trapper-selected cDNAs to prepare
RT   full-length cDNA libraries for rapid discovery of new genes";
RL   Genome Res. 10(10):1617-1630(2000).
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RN   [8]
RX   DOI; 10.1101/gr.152600.
RX   PUBMED; 11076861.
RA   Shibata K., Itoh M., Aizawa K., Nagaoka S., Sasaki N., Carninci P.,
RA   Konno H., Akiyama J., Nishi K., Kitsunai T., Tashiro H., Itoh M., Sumi N.,
RA   Ishii Y., Nakamura S., Hazama M., Nishine T., Harada A., Yamamoto R.,
RA   Matsumoto H., Sakaguchi S., Ikegami T., Kashiwagi K., Fujiwake S.,
RA   Inoue K., Togawa Y., Izawa M., Ohara E., Watahiki M., Yoneda Y.,
RA   Ishikawa T., Ozawa K., Tanaka T., Matsuura S., Kawai J., Okazaki Y.,
RA   Muramatsu M., Inoue Y., Kira A., Hayashizaki Y.;
RT   "RIKEN integrated sequence analysis (RISA) system--384-format sequencing
RT   pipeline with 384 multicapillary sequencer";
RL   Genome Res. 10(11):1757-1771(2000).
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DR   MD5; 445c3897fa2c2dea85f97036a149aed6.
DR   Ensembl-Gn; ENSMUSG00000034171; mus_musculus.
DR   Ensembl-Tr; ENSMUST00000049095; mus_musculus.
DR   GOA; O08914.
DR   InterPro; IPR000120; Amidase.
DR   InterPro; IPR020556; Amidase_CS.
DR   InterPro; IPR023631; Amidase_dom.
DR   InterPro; IPR030560; FAAH.
DR   MGI; MGI:109609; Faah.
DR   UniProtKB/Swiss-Prot; O08914; FAAH1_MOUSE.
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CC   cDNA library was prepared and sequenced in Mouse Genome
CC   Encyclopedia Project of Genome Exploration Research Group in Riken
CC   Genomic Sciences Center and Genome Science Laboratory in RIKEN.
CC   Division of Experimental Animal Research in Riken contributed to
CC   prepare mouse tissues.
CC   Please visit our web site for further details.
CC   URL:http://www.osc.riken.jp/
CC   URL:http://fantom.gsc.riken.jp/
CC   clone information is available at:
CC   http://fantom.gsc.riken.jp/3/db/annotate/
CC   main.cgi?masterid=1300013E02
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FH   Key             Location/Qualifiers
FH
FT   source          1..2803
FT                   /organism="Mus musculus"
FT                   /strain="C57BL/6J"
FT                   /mol_type="mRNA"
FT                   /sex="male"
FT                   /dev_stage="adult"
FT                   /clone_lib="RIKEN full-length enriched mouse cDNA library"
FT                   /clone="1300013E02"
FT                   /tissue_type="liver"
FT                   /db_xref="taxon:10090"
FT   misc_feature    1..2803
FT                   /note="fatty acid amide hydrolase (MGD|MGI:109609)"
FT                   /note="putative"
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SQ   Sequence 2803 BP; 593 A; 757 C; 819 G; 634 T; 0 other;
     ggggttttgc agcggagctg ttggtgtgcg cgtgccgagt cctctcgggt ggcggtcggc        60
     tgcaggagat catggtgctg agcgaagtgt ggaccgcgct gtctggactc tccggggttt       120
     gcctagcctg cagcttgctg tcggcggcgg tggtcctgcg atggaccagg agccagaccg       180
     cccggggcgc ggtgaccagg gcgcggcaga agcagcgagc cggcctggag accatggaca       240
     aggcggtgca gcgcttccgg ctgcagaatc ctgacctgga ttcagaggcc ttgctggctc       300
     tgcccctgct ccaactggta cagaagttac agagtgggga actgtcccca gaagctgtgc       360
     tctttaccta cctgggaaag gcctgggaag tgaacaaagg gaccaactgt gtgacctcct       420
     atctgactga ctgtgagact cagctgtccc aggccccacg gcagggcctg ctctatggcg       480
     tccccgtgag cctcaaggaa tgcttcagct acaagggcca tgcttccaca ctgggcttaa       540
     gtttgaacga gggtgtgaca tcggagagtg actgtgtggt ggtgcaggta ctgaagctgc       600
     agggagctgt gccctttgtg cacaccaacg tcccccagtc catgctaagc tatgactgca       660
     gtaaccccct ctttggccag accatgaacc cgtggaagcc ctccaagagt ccaggaggtt       720
     cctcaggggg tgagggggct ctcattggat ctggaggccc ccctctgggt ttaggcactg       780
     acatcggcgg cagcatccgg ttcccttctg ccttctgtgg catctgtggc ctcaagccta       840
     ctgggaaccg cctcagcaag agtggcctga agagctgtgt ttatggacag acagcagtgc       900
     agctttctgt tggccccatg gcacgggatg tggatagcct ggcattgtgc atgaaagccc       960
     tactttgtga ggatttgttc cgcttggact ccaccatccc ccccttgccc ttcagggagg      1020
     agatctacag aagttctcga ccccttcgtg tgggatacta tgaaactgac aactacacca      1080
     tgcccactcc agccatgagg agggctgtga tggagaccaa gcagagtctc gaggctgctg      1140
     gccacacgct ggtccccttc ttaccaaaca acatacctta tgccctggag gtcctgtcgg      1200
     caggtgggct gttcagtgat ggtggctgct cttttctcca aaacttcaaa ggcgactttg      1260
     tggatccctg cttgggggac ctggtcttag tgctgaagct gcccaggtgg tttaaaaaac      1320
     tgctgagctt cctgctgaag cctctgtttc ctcggctggc agcctttctc aacagtatgt      1380
     gtcctcggtg agaacttcaa tgcctgcccc tgtgtatcct caactggtct agtctgagtt      1440
     cacgtggttt tgacagaaca atctccggga gaaacagatg ctaaagttga ggtgttccag      1500
     gcagggaggg ggactgatgg ccatcaggtg gggccctgaa gcttcatatg ggtcacctga      1560
     gtgcagagca ggacagccac acagagggaa gcatggggga aagttcagaa aggaattagc      1620
     ctgaacagca gtggtgtggg gattgtgggt caaggaaaca ggcaaaaaac tgttaggaaa      1680
     ctgaactgag cgtgtctgga cctgctctag ccgactcttt gtgctggtct tcaaaagcag      1740
     gacatgatcc accccattct cagcatgatg tctgtggacg gacatagtcc tcttacctcc      1800
     agatattaag gactttggat agcctgccct atcctctctt gtagctcaag agtcacaaag      1860
     aatcagacat ggtctagtgc tggtttatct atgacgtcac taacccaccc agcctgagtc      1920
     ccttgaaatc ccggattttt ccatctggag agcagggcct tgattccctc agagctcccc      1980
     tggggttgaa tgagatcttg aagtgatggc agtaggatgg atggtgttgc tgatgctgat      2040
     ggccatggct gtgaaggctg acgaccttcc tctctctctg ctcaggtcag ccgaaaagct      2100
     gtgggaactg cagcatgaga ttgagatgta tcgccagtcc gtcattgccc agtggaaggc      2160
     aatgaacttg gacgtggtgc taacccccat gctgggtcct gctctggatt tgaacacacc      2220
     gggcagagcc acaggggcta tcagctacac tgttctctat aactgcctgg acttccctgc      2280
     gggggtggtg cctgtcacca ctgtgaccgc tgaggacgat gcccagatgg aacactacaa      2340
     aggctacttt ggggatatgt gggacaacat tctgaagaag ggcatgaaaa agggtatagg      2400
     cctgcctgtg gctgtgcagt gcgtggctct gccctggcag gaagagctgt gtctgcggtt      2460
     catgcgggag gtggaacggc tgatgacccc tgaaaagcgg ccatcttgag ggtcattcat      2520
     ctgcccagct ctggaggacc taaggcccat gcgctctgca ctgcagcccc atctattcag      2580
     gatcctgcca cccatgagga gatgcccagc acgggaagag gcaaccacct gccctcccct      2640
     ggactcctac agaaacccag gacatgccct ccataaccaa gtctggacct tgctcccctt      2700
     tctggtctac tttccatcct gaccccctac tctatgtgac agcccagcag gaacgacacg      2760
     ggccaaggac caccaacagt caaaaaaagc aatgtgtttc tgt                        2803
//


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