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EBI Dbfetch

ID   AJ133485; SV 1; linear; genomic DNA; STD; MUS; 2418 BP.
XX
AC   AJ133485;
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DT   04-JAN-2002 (Rel. 70, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 6)
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DE   Mus musculus ptch2 gene, exons 20-22
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KW   patched 2 protein; ptch2 gene.
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OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Mus; Mus.
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RN   [1]
RP   1-2418
RA   Froehlich L.;
RT   ;
RL   Submitted (26-FEB-1999) to the INSDC.
RL   Froehlich L., Molecular Endocrinology, Max Planck Institute for
RL   Biochemistry, Am Klopferspitz 18A, Martinsried 82152, Germany.
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RN   [2]
RX   DOI; 10.1159/000064064.
RX   PUBMED; 12438747.
RA   Froehlich L., Zhanquin L., Beier D.R., Lanske B.;
RT   "Genomic structure and refined chromosomal localization of the mouse Ptch2
RT   gene.";
RL   Cytogenet. Genome Res. 97(1-2):106-110(2002).
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DR   MD5; 01cf25de0757c9c45f6d6e03d5a987ca.
DR   Ensembl-Gn; ENSMUSG00000028681; mus_musculus.
DR   Ensembl-Tr; ENSMUST00000030443; mus_musculus.
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FH   Key             Location/Qualifiers
FH
FT   source          1..2418
FT                   /organism="Mus musculus"
FT                   /chromosome="4"
FT                   /map="between D4Mit20 and D4Mit334"
FT                   /strain="129 SvJ"
FT                   /mol_type="genomic DNA"
FT                   /tissue_type="liver"
FT                   /db_xref="taxon:10090"
FT   intron          <1..223
FT                   /gene="ptch2"
FT                   /number=19
FT   exon            224..366
FT                   /gene="ptch2"
FT                   /number=20
FT   intron          367..454
FT                   /gene="ptch2"
FT                   /number=20
FT   exon            455..554
FT                   /gene="ptch2"
FT                   /number=21
FT   intron          555..851
FT                   /gene="ptch2"
FT                   /number=21
FT   exon            852..>2418
FT                   /gene="ptch2"
FT                   /number=22
FT   3'UTR           1044..>2418
FT                   /gene="ptch2"
FT   misc_feature    1506..1510
FT                   /function="mRNA destabilizing motif"
FT   polyA_signal    2296..2301
FT                   /gene="ptch2"
XX
SQ   Sequence 2418 BP; 578 A; 678 C; 623 G; 539 T; 0 other;
     ccagacatca ttgacaccaa cctgggcatt gctctgtgtg gccagacaca tctctagtgt        60
     taccaaagtg cactccacaa tgcttccaga ccatccccat gaagctaggt ggcctggccc       120
     tctgaggggg aaggcctggg tgcacccagg aatggagaaa tacccacggg ggacactggc       180
     tgtttagcag aggaggaact ccagggctct cttctctccc cagggcttcc tgaccagcca       240
     tggtagccgg aacctgcggg ctgctagcgc tctggaacag acctttgccc ctgtgactga       300
     tggagctgtc tccaccttgc tgggtctgct catgcttgct ggttctaact ttgacttcat       360
     cataaggtac aagagggctc cggaagaggg gactgcccac cctggcctcg ggtgaccccg       420
     aggcctggcc accgaccctc gcgctctcgt gcaggtattt ctttgtggtg ctgacggtgc       480
     tgacactctt gggcctgctc catggactcc tgctgctgcc tgtgctgctc tctatcctag       540
     gccccccgcc acaggtgacc aaactctcct gtcctcaccc taagggacag ggtagtaaag       600
     caagggaggg acagacccat aaccaaaggc cctcagtggc tagcagaggg ctcagctctg       660
     aagggccctc ctaaaagagg gctgaaagag gcctcctcgg atgctgggct cctgcccctc       720
     agccttcagt gggactggcc ttacttagcc ttttaggacc cagggcagaa ggtgggtttg       780
     gcaggccttg aaatcttcat gctctgtgaa atctgaccgg gagcctggct tgggactggt       840
     gtgtctttca ggtggtgcag gtatacaagg agagtccaca gaccctaaac tccgctgctc       900
     cacagagagg tgggctcagg tgggacaggc cccccaccct gccccagagt tttgccagag       960
     tgactacctc catgactgtg gccctccacc caccacctct gcctggagca tacgtccacc      1020
     cagcctccga ggagcccaca tagtctcctg ctgccgcccc agcacaacct cagttgtaga      1080
     ggactgggtc tagccacccg agtgaaagag tgtcagaacc acagagacct gcagggccat      1140
     acagagtcac tgggacgcaa tgggtgaggt atggagtgca ggatggaccc ctggagggcc      1200
     ttatgctgct gtctgtatct cctcccgact ccacacacct agctgacacc caaaaagaat      1260
     agctactgct tggacaagag gctcccagca catagggact cacgggagct cacgtctgta      1320
     tccaggttgg gccgagaggc tccattctgg ctgcagtgca gccctgtcct gttctgtccc      1380
     acactgtcac ctcagtagat gaagcctgag ggtttccagc acattctccc atccctggcc      1440
     tttcattgct tgatgactcc tagggaggcc ctctgttccc ctccctacct cctaccatat      1500
     aaattattta tatgaagatg tttatttttg tatatagatg ctatcactgc tcaaagttct      1560
     atttttaaag agtgaaatat attctataca aactcatctc agatggctgg agtttttctt      1620
     agatgacttt taggggagtg agcatcagag gtggcttgag gggtgtcagg gcctggactt      1680
     gtctagttct gggtggggac gacctcagat gctgaagttt tatcaaaata attgggtcgg      1740
     cataaatgct tagtataagg tgctatggga gcctcaggtg accgtgcaaa catggccaag      1800
     tccaagaaac accacacaca accagtcctg aaaatgacac agaaacgcac caagaaaccc      1860
     ctgtcacaaa tctcccaagg acacctaccc caagtgcccg aggagcctgt gctttgccaa      1920
     gaagcacaag aattctaggc ctgaagaaga cacaggcaaa ggcagtgctt gcgcacgcat      1980
     caaagcccct gtgaagccca ggtgctaaag accccagctg cacactcaga catctgcctt      2040
     tcatcatgac ccccccacac acacttggga agcatactca aagctacatg gctaagagtc      2100
     gtaggctctg ccaaccaaag cccaaggttc aaaccaaagc agaggctgca gctccaggtt      2160
     gggctcccag aggtgcacag gtccctgtaa aggctccata gaaaaggctt ctatctacca      2220
     atgtgagaca ggtggactgg tgtgacacag ctacacactg tttgcagatg accagtgctc      2280
     tgtgctgttt ttacaaataa actagaagca aggtctgctt gttagcttgc ttgtttgttt      2340
     gtttttaaaa agcttagtat aggaaatgta aacaaagccc ttcttgaaaa agaaaagaca      2400
     aacaggcgct gggcatgg                                                    2418
//


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