Dbfetch

ID   AF333473; SV 1; linear; genomic DNA; STD; MUS; 1259 BP.
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AC   AF333473;
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DT   31-MAY-2001 (Rel. 67, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 3)
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DE   Mus musculus calcitonin receptor gene, P3 promoter and exons 3a and 3b',
DE   alternatively spliced.
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KW   .
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OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Mus; Mus.
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RN   [1]
RP   1-1259
RX   DOI; 10.1074/jbc.M007104200.
RX   PUBMED; 11309373.
RA   Anusaksathien O., Laplace C., Li X., Ren Y., Peng L., Goldring S.R.,
RA   Galson D.L.;
RT   "Tissue-specific and ubiquitous promoters direct the expression of
RT   alternatively spliced transcripts from the calcitonin receptor gene";
RL   J Biol Chem 276(25):22663-22674(2001).
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RN   [2]
RP   1-1259
RA   Anusaksathien O., Li X., Ren Y., Laplace C., Goldring S.R., Galson D.L.;
RT   ;
RL   Submitted (04-JAN-2001) to the INSDC.
RL   New England Baptist Bone & Joint Institute, Beth Israel Deaconess Medical
RL   Center and Harvard Medical School, Harvard Institutes of Medicine, Rm247, 4
RL   Blackfan Circle, Boston, MA 02115, USA
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DR   MD5; dc46068718551ce21b3342672ef1d62f.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1259
FT                   /organism="Mus musculus"
FT                   /chromosome="6"
FT                   /strain="129"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:10090"
FT   intron          <1..221
FT                   /number=2c
FT                   /note="10.1 kbp"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT   exon            222..329
FT                   /number=3a
FT                   /note="alternatively spliced from both P1 and P2
FT                   transcripts; contains the upstream translation start"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT   intron          330..>1259
FT                   /number=3a
FT                   /note=">14.5 kbp (up to exon 3b)"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT   regulatory      700..1018
FT                   /note="P3 promoter"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /regulatory_class="promoter"
FT   exon            1019..1083
FT                   /number=3b'
FT                   /note="putative start of the P3 primary transcript;
FT                   contained within intron 3a; P3 primary transcript is 66530
FT                   bp in length"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
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SQ   Sequence 1259 BP; 411 A; 226 C; 214 G; 408 T; 0 other;
     gagaactaat taagaacttg taagcaacca tgtatacaaa atgcatatat ttatatgcat        60
     atataagtat aaagatatgc attttgtata catatcagta ttttgtaaaa catatcagta       120
     aaaataatca tgaaaaacat atctaccact tacatagaac ttactatgag ccactaatgt       180
     tgtgtgcttt tcactgattt taatacattt gatatttgca gcatccacct aaggtaagtg       240
     ccattagagc gccttccaga ggagaagaaa ccgagggagc agggctacta cacagaggat       300
     ttgaaaatga ctccaaggag gtccagagtg taagtaaatc agaaaagaga catgtactta       360
     ctattacatt tctgacggcc aaagttcatt ctcttaatga aaaatatctc tcgctttgta       420
     ttttgcatgt cttgaagcag cagatccatg gatttctgtc ttagaaaata tatagaaata       480
     ataaagggtt tccttattgt aaatatcttt ctctgaagct gtcatgctta tacccaggtt       540
     tatagtattc cactgcaaac tgagctttac cagggaaaag tgtgctctcc aagttgacaa       600
     tttcattcat taaaaaaaaa atcaagatca tactgcaaac aagttgactt attatttcaa       660
     attttccatt agaaatattc aacacaactc ttaactggac cttaaaaaga atcccaaaac       720
     tacattttgc ctctttccat gagagctagt cagaaaccca tggtatctgt ggttttaatg       780
     gtgtggaggg gaaaataaat gtatgagccc aaaatggcaa atgaaaacac atcgaatttt       840
     aattagtcta aaaatgtcaa ttttcctatt cactcagaga tgataaactt tccaagctct       900
     attttggaac atgacagctc atttccatgt tccctggaca tttccctatc tgatgactac       960
     cttggtactc tgtgtacttg ggcaaacagg gggaggggcc aacaggagtg ggactgtcca      1020
     tcctgaagcc caaaggaaac tgtgtgtaag tccttcgagt gcattcaggc tattcagtct      1080
     tctgtaagtg gtttttatta attatgtctg tgtttgttta tttgctatat ctacatttac      1140
     attaatttca ccccttccat ttgcttgtct tacacatgtc ttacattcta gtgtaaatca      1200
     tgtttaatct acaacttttt ttctctaatg gtacagatga attttagaac agtaagaga       1259
//