Dbfetch

ID   AF216834; SV 2; linear; genomic DNA; STD; MUS; 4857 BP.
XX
AC   AF216834;
XX
DT   11-JUL-2000 (Rel. 64, Created)
DT   04-DEC-2002 (Rel. 74, Last updated, Version 2)
XX
DE   Mus musculus ferroportin 1 (Slc39a1) gene, promoter region and partial cds.
XX
KW   .
XX
OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
XX
RN   [1]
RP   1-4857
RX   DOI; 10.1074/jbc.M000713200.
RX   PUBMED; 10747949.
RA   Abboud S., Haile D.J.;
RT   "A novel mammalian iron-regulated protein involved in intracellular iron
RT   metabolism";
RL   J Biol Chem 275(26):19906-19912(2000).
XX
RN   [2]
RP   1-4857
RX   PUBMED; 10828623.
RA   Haile D.J.;
RT   "Assignment of Slc11a3 to mouse chromosome 1 band 1B and SLC11A3 to human
RT   chromosome 2q32 by in situ hybridization";
RL   Cytogenet. Cell Genet. 88(3-4):328-329(2000).
XX
RN   [3]
RP   1-4857
RA   Haile D.J.;
RT   ;
RL   Submitted (15-DEC-1999) to the INSDC.
RL   Medicine, UTHSCSA, 7703 Floyd Curl Drive, San Antonio, TX 78229, USA
XX
RN   [4]
RC   Sequence update by submitter
RP   1-4857
RA   Haile D.J.;
RT   ;
RL   Submitted (09-NOV-2001) to the INSDC.
RL   Medicine, University of Texas Health Science Center at San Antonio, 7703
RL   Floyd Curl Drive, San Antonio, TX 78240, USA
XX
DR   MD5; ca90db544f07fe28d23d783df7698b8c.
DR   Ensembl-Gn; ENSMUSG00000025993; mus_musculus.
DR   Ensembl-Gn; MGP_129S1SvImJ_G0015996; mus_musculus_129s1svimj.
DR   Ensembl-Gn; MGP_AJ_G0015980; mus_musculus_aj.
DR   Ensembl-Gn; MGP_AKRJ_G0015935; mus_musculus_akrj.
DR   Ensembl-Gn; MGP_BALBcJ_G0015934; mus_musculus_balbcj.
DR   Ensembl-Gn; MGP_C3HHeJ_G0015767; mus_musculus_c3hhej.
DR   Ensembl-Gn; MGP_C57BL6NJ_G0016387; mus_musculus_c57bl6nj.
DR   Ensembl-Gn; MGP_CASTEiJ_G0015349; mus_musculus_casteij.
DR   Ensembl-Gn; MGP_CBAJ_G0015739; mus_musculus_cbaj.
DR   Ensembl-Gn; MGP_DBA2J_G0015840; mus_musculus_dba2j.
DR   Ensembl-Gn; MGP_FVBNJ_G0015842; mus_musculus_fvbnj.
DR   Ensembl-Gn; MGP_LPJ_G0015910; mus_musculus_lpj.
DR   Ensembl-Gn; MGP_NODShiLtJ_G0015862; mus_musculus_nodshiltj.
DR   Ensembl-Gn; MGP_NZOHlLtJ_G0016434; mus_musculus_nzohlltj.
DR   Ensembl-Gn; MGP_PWKPhJ_G0015133; mus_musculus_pwkphj.
DR   Ensembl-Gn; MGP_WSBEiJ_G0015410; mus_musculus_wsbeij.
DR   Ensembl-Tr; ENSMUST00000027137; mus_musculus.
DR   Ensembl-Tr; MGP_129S1SvImJ_T0019694; mus_musculus_129s1svimj.
DR   Ensembl-Tr; MGP_AJ_T0019671; mus_musculus_aj.
DR   Ensembl-Tr; MGP_AKRJ_T0019628; mus_musculus_akrj.
DR   Ensembl-Tr; MGP_BALBcJ_T0019620; mus_musculus_balbcj.
DR   Ensembl-Tr; MGP_C3HHeJ_T0019449; mus_musculus_c3hhej.
DR   Ensembl-Tr; MGP_C57BL6NJ_T0020119; mus_musculus_c57bl6nj.
DR   Ensembl-Tr; MGP_CASTEiJ_T0018956; mus_musculus_casteij.
DR   Ensembl-Tr; MGP_CBAJ_T0019403; mus_musculus_cbaj.
DR   Ensembl-Tr; MGP_DBA2J_T0019517; mus_musculus_dba2j.
DR   Ensembl-Tr; MGP_FVBNJ_T0019523; mus_musculus_fvbnj.
DR   Ensembl-Tr; MGP_LPJ_T0019605; mus_musculus_lpj.
DR   Ensembl-Tr; MGP_NODShiLtJ_T0019493; mus_musculus_nodshiltj.
DR   Ensembl-Tr; MGP_NZOHlLtJ_T0020173; mus_musculus_nzohlltj.
DR   Ensembl-Tr; MGP_PWKPhJ_T0018713; mus_musculus_pwkphj.
DR   Ensembl-Tr; MGP_WSBEiJ_T0019044; mus_musculus_wsbeij.
DR   RFAM; RF02253; IRE_II.
XX
CC   On Dec 2, 2002 this sequence version replaced gi:8927327.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..4857
FT                   /organism="Mus musculus"
FT                   /chromosome="1"
FT                   /map="band 1B"
FT                   /strain="129/SvJ"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:10090"
FT   misc_feature    1..3772
FT                   /gene="Slc39a1"
FT                   /note="promoter region"
FT   mRNA            join(3773..4134,4571..>4638)
FT                   /gene="Slc39a1"
FT                   /product="SLC11A3"
FT   misc_feature    3794
FT                   /gene="Slc39a1"
FT                   /note="possible alternative transcription start site"
FT   CDS             join(4092..4134,4571..>4638)
FT                   /codon_start=1
FT                   /gene="Slc39a1"
FT                   /product="ferroportin 1"
FT                   /note="SLC11A3; IREg1; MTP1"
FT                   /db_xref="GOA:Q9JHI9"
FT                   /db_xref="InterPro:IPR009716"
FT                   /db_xref="InterPro:IPR020846"
FT                   /db_xref="MGI:MGI:1315204"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9JHI9"
FT                   /protein_id="AAF82036.1"
FT                   /translation="MTKARDQTHQEGCCGSLANYLTSAKFLLYLGHSLSTW"
XX
SQ   Sequence 4857 BP; 1349 A; 950 C; 1143 G; 1407 T; 8 other;
     tagtaggaat tagcttcaag gggtttctta gaagcaggta tgctgtatgg catgtcggag        60
     gcagatgact tgaataggtg tgtacactga gaactctttg gagatatgtg agatctgaga       120
     tttatactct cttctgtgag ggcagcaagc aattgagaaa tcaaatgaac agggacctag       180
     tgtctgtctg tttggctaag ccctaggatg gcaaggctga gagaggtctt tagggttgta       240
     gttagtaagc atccagcttt ggtgtttagc tggaaacaag caataaagga atggacttta       300
     tttcataaca gaaataaagt tagacagaaa ggatctatgg caaaagttaa gagaccaaaa       360
     tacttattaa gtgaaattca tatatatttt ctggctatat atggagaaaa ttaacaatga       420
     acacagctct ctattttagt ttccaatata acgtgcaaga tttgatttct gttttcttct       480
     ttctacatat ctttcctata ttaatccctg atttgggaaa atggcagagt ttccttttaa       540
     gacactgttt tttgtttgtg tgttttttaa taactgaggt aaaaaaatca catgagataa       600
     attcattgtt tatgtcattt taatacagct ttgacacttt ggataattca caatgttgca       660
     tcatcaccag tgacaagaca tccatcattt tatgcccagt gcccaggatc ttgtcattac       720
     ctactcttct ttcagacctt gaggacaact atgatattat tattattatt attattatta       780
     ttattgtata cattattgta acatacacaa tgtatatatt accacgtata taatgtaata       840
     aatatatatt taatattcat acacaaatac tatatattat gtataacaca tacttataaa       900
     tgtctatata ttatatgtta taaatgttgt ataacaaaat atttatatat aatatataat       960
     gtaaataatg tatattacat attaaatata tacttttgaa atattatgca ttcatttttt      1020
     aaagctagag atgtatgagg agaatggagg agaggtcacg tatttataca aagcttgcca      1080
     aggttgagtt tcttgggata ctcaaccaaa ataaagcgtt atgatgatga tcatctttct      1140
     gttcgttgtc tatgacttga agtaagaccc tgaatttgaa tttctcaaga gtctactcag      1200
     tttgaagctt atagaagtct cagacagtct tgaaaggcac ttggacagaa ttgtggcttt      1260
     gtactgttaa agctttgcat ctgatgggag ctctgtcctc agagctaagg cttcctgtaa      1320
     cagtggatga taaccccact gtgttttttc cttttcattt gtcttcacgg ctgtggagta      1380
     gtggccattc cctgtgctgt ttttgatctg gagagctggt cagatgcaga agaggcaact      1440
     gagggccctg gaggtaagta aaaacacaac ttgaaaggaa agaataagtc cttttattcc      1500
     ccaaccataa atatgtgtta acaacttcca atcagagtac attttattct ggctggaaga      1560
     tttaaaaggc tcttttaaaa ctaacagact tttaaacagc tcaatagtga cacacgcctg      1620
     ttattccagt gctggggaag ctgaggcaga aggattctga gttcagagcc ggtatgagta      1680
     acttacattc tgtctcataa ataccatatt gaaatgaatt gagaaatagt tttggggggc      1740
     acttattttt tgtttttgaa aactggttta aaacatgcat gactttgttt agttatgatt      1800
     acgttgataa gaaagttata tattttctgt tctgagaggg aaaacattgc ttttggatga      1860
     aactttactt ttcaatcagt gaaatgtttc tgtggtagga ggaagagcca gtggtgtctt      1920
     gtgactgagc tatgctttct aatctggaat gtcaaggcca ggaaactctg tcacttgtgt      1980
     actccaagcg ttctgagaat ttttattcca ttttctattt taactccttc tatgtcatga      2040
     gctccaacaa tacactaact attcattccc aacgactagg ataggagccc tggccaagtc      2100
     ctcagatatt gaatgctttt tctgtctatg aatcttgctt atttgctgct tgcttcactg      2160
     taggacccca cctgttctta gcactctcct agtttgggct tctgaggact ccttggtgac      2220
     aatggggaac acatcacact tcgaagcacg catcaactga gctcctgttt ctcagagtct      2280
     tctgactaga tgtgggggat agctcttaag gcacactgta cttaatgcaa agggcatgga      2340
     gatcctgtta ttggcacata tgtgcaggga atcaggatag tttgtattct gaagatcaac      2400
     aaaattaaaa gaaaggaagg aagggctggg ggaaacagag agacagacag agagagagag      2460
     agacagagag agagagagag agagagagag agagagagag agaaaccgtc agaacttgct      2520
     agatgatccc ttcctaagtg cttcatgtaa gcacacttaa agtttactcc aaacgacatt      2580
     tggatatact accccatttt gcatcttcag cagacatacc cgaacctgtg atagaggaga      2640
     aaggacttaa acgttttgtg tgtcaggaga gagaaaggtt tgcaaaggac aaaaagcggt      2700
     tgcagtagca aagccctatc tcggttctgc agacctcatc ctaacgaatc cagctgcacc      2760
     ccgcccgcaa agacctttgg ggcttctgat agagagtcca gatacaaggc ctgtgctcat      2820
     gagtggctct cttcattacc aggtgtcatt ctggcagggc tggaagagtg caagccggtt      2880
     ggagtttcaa tgtgtaggat cactcttgaa gtgttgacaa aactgacaaa ggtaagctaa      2940
     gggaagggct gacacaagaa gcaggtatgc cctggggagg aaacggaggt cattagaggc      3000
     ttacacctgg tgtgtattca cctgtccccc caggaggcta ccaaaagggc tttatctgca      3060
     cggggccaga cccagggtcc caactgggac aaccggtatt cctggttact tcccttcagc      3120
     acttggagcc tgtggagtag ccaaagaggc aggagcggct agggttagaa ctcagaggga      3180
     aaggacagtg aagggcgctg cctccttgca gtgcctgtgg cacagaaggc ggcctgcgtt      3240
     cgatcactgg gctgcgcggg gctacattgt gatctttgag cctgcttcct gagctttgat      3300
     tccgcagctt ttgagagaga gccctctcta tagttcggag aaggaaaaca ttctgcgccg      3360
     caggcaggcc ggacatgact tgtatttact tagctacctg cattccgaag ggtagctagg      3420
     gtgggaggct cctttttttc cgcgccagct cccgctgagc tttgcctagg gactgtccgg      3480
     caatctggtg gccagagaga agagcttcct tctagcacct gccaatcgac tttgtgcaaa      3540
     atgtttctgt agtgtcccct cggggtccgc atacagtccc cgtcctactg tgcgggccac      3600
     cccttggctt ctcctgcggt agcccagcca aagcgcaggt tgtttgcgtc tcctgggagg      3660
     gcggtgggag cgtagctggc gcggacctgg acgtccagcc gcgaagggcg gtccctgctc      3720
     tctcaagctc cgcccccggc tccctataag ccgctgccct gcccgcggcg gtggcggcgg      3780
     cggcggcggc ggcgagagca ggctcggggt ctcctgcggc cggtggatcc tccaacccgc      3840
     tcccataagg ctttggcttt ccaacttcag ntacagtgtt agctaagttt ggaaagaaga      3900
     caaaaagaag accccgtgac agctttgctg ttgttgtttg ccttagttgt cctttggggt      3960
     ctttcggcat aaggctgttg tgcttatagt ggtgntatnt tcggttcctc tcactcctgt      4020
     gaacaagctc ccgggcaaga gcagctaaag ctaccagcat cagaacaaac acggggagaa      4080
     cgcctggtgt catgaccaag gcaagagatc aaacccatca ggaaggatgc tgtggtgagt      4140
     tgagtaatcg aatgtttcaa atggtgggaa tgcaggtggg gacggggaga tgtagttcca      4200
     tgagggttga cttgggtttt gatggagggt gaagaagaat atawactcat agtttgaata      4260
     aaagaactta catataggca gggatagagt aacctgggca gggtgaaatt tcttgcatta      4320
     aaaaaacaaa ccccaccaaa gttaagtaat gttgaaacaa gagtttcttc actgcctgaa      4380
     gttggggcgg ttattgacca agagacaacg ctgaatctta agtggatgct attaagtaaa      4440
     ctgaatgcat cagtcttgta agtgacctgt tttaaaaaat cacacttaat tacgaccaaa      4500
     agcaaattct aatctgagca cattggggtg cttaaacacg ttttttaact tgttctctgt      4560
     gcctttctag gatccttagc aaactacctg acctcagcaa aattcctcct ctaccttggc      4620
     cactctctct ccacttgggt aagtgagnat gcacacagtt cttgagacat cgtngcacaa      4680
     gctgttgttt actctcatcg gagacagttg tattggagaa ctngcagttt tctcattccg      4740
     ttaagtaaat aaatcgttct aanacacatg tttcaacaaa aacgttgttt tcttcaaaga      4800
     tgtttcccat gagtgttagt aaattttact taatagtgaa attctaaagc taagggc         4857
//