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EBI Dbfetch

ID   AF130461; SV 1; linear; genomic DNA; STD; MUS; 6713 BP.
XX
AC   AF130461;
XX
DT   27-APR-1999 (Rel. 59, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Mus musculus thrombospondin-4 gene, promoter region and partial cds.
XX
KW   .
XX
OS   Mus musculus (house mouse)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea;
OC   Muridae; Murinae; Mus; Mus.
XX
RN   [1]
RP   1-6713
RX   DOI; 10.1007/s003359901149.
RX   PUBMED; 10501972.
RA   Newton G., Weremowicz S., Morton C.C., Jenkins N.A., Gilbert D.J.,
RA   Copeland N.G., Lawler J.;
RT   "The thrombospondin-4 gene";
RL   Mamm. Genome 10(10):1010-1016(1999).
XX
RN   [2]
RP   1-6713
RA   Newton G.A., Lawler J.W.;
RT   ;
RL   Submitted (23-FEB-1999) to the INSDC.
RL   Pathology, Beth Israel Deaconess Medical Center, 99 Brookline Avenue,
RL   Boston, MA 02215
XX
DR   MD5; 1d141c7ee559d2cc46fdd170a0115fb7.
DR   Ensembl-Gn; ENSMUSG00000021702; mus_musculus.
DR   Ensembl-Tr; ENSMUST00000022213; mus_musculus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..6713
FT                   /organism="Mus musculus"
FT                   /chromosome="13"
FT                   /map="13q13"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:10090"
FT   mRNA            join(<1853..1946,5644..>5847)
FT                   /product="thrombospondin-4"
FT   CDS             join(1853..1946,5644..>5847)
FT                   /codon_start=1
FT                   /product="thrombospondin-4"
FT                   /db_xref="GOA:Q9Z1T2"
FT                   /db_xref="InterPro:IPR000742"
FT                   /db_xref="InterPro:IPR001791"
FT                   /db_xref="InterPro:IPR001881"
FT                   /db_xref="InterPro:IPR003367"
FT                   /db_xref="InterPro:IPR008859"
FT                   /db_xref="InterPro:IPR008985"
FT                   /db_xref="InterPro:IPR013032"
FT                   /db_xref="InterPro:IPR013320"
FT                   /db_xref="InterPro:IPR017897"
FT                   /db_xref="InterPro:IPR018097"
FT                   /db_xref="InterPro:IPR024665"
FT                   /db_xref="InterPro:IPR028974"
FT                   /db_xref="MGI:MGI:1101779"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9Z1T2"
FT                   /protein_id="AAD27642.1"
FT                   /translation="MPAPRAAAAAFLLLHLVLQPWQRTSAQATPQVFDLLPSSPQRLNP
FT                   SALQPVLTDPTLHEVYLISTFKLQSKSSATIFGLYSSSDNSKYFEFTVMGRLNK"
XX
SQ   Sequence 6713 BP; 1761 A; 1620 C; 1473 G; 1859 T; 0 other;
     gaattcactt cgtagtccag gctgacttct aactcatgat tcccctgcct ctgtgaagcc        60
     ctctgagtcc tggtgattgc atctacatac cattacaagc tttgttactt gtagttttat       120
     agcttgggtg tcctgtagtc acctaaattt gtgtgtgttt ctatgtgtgt gtgtgtgcgc       180
     gtgtgtgcgc gcgcgcgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt       240
     gtgtgtgtgt aacctcctga agaagattct aatgcactca tccagctaaa tgttggcttt       300
     taaacgtgta aatattcata cactctacac actcgcttca aggaaaactt actctgagcg       360
     agttgtacgg agcatttaaa ggcagagctg ttctgtctaa aggcagagct cttctgtcta       420
     aagcatagct agagccctcc acccctctaa ccttgagact cagttcggaa acctggagaa       480
     aatattccaa agtctgatcc atctcattat tgcataggga cgcatacctg ccccttttgt       540
     gtgttttcag ttctaactga taggcatatg gtgacccatt ctgcctaatg cactagataa       600
     aacaacatta cagaatgccc agagaggcct ttattagaca ccaaagagaa gattgctgag       660
     aggacagctc agatcttcga cttattagct gtaaacacaa tcaggagtgg agagggattg       720
     gagatagaat ggtgggttaa ccacccagct ggtggtagat agcttctaca aatggaatgc       780
     tttgagaata cagatgagat aggtctagaa atcctctgaa gccctctgca ctggtgggga       840
     ttgttacaca gggaatattt ttactgccgc ttttcaaatg tttttccctt tagttaatcc       900
     atgacaccct cctgagggct ctgcctggga ggaagagggg ccactccagt gcccctgctt       960
     tgtcttccta accccatagc ttcaaactga acctttagaa agtgttgtgc tgcccaaggt      1020
     gggtgcacag cccttttgca aactggcctg aagtaaatca tccatgagac tcagtatctc      1080
     catctctgcc taactgtctg cgtggatacc ttgcgacatt tttatttcca acacccccgc      1140
     attaaataaa taaataaata aataaataaa taaataaata aatctttcca cttatcactc      1200
     tttctgtctc aaaacttggt ggaaaaaaaa aaattcatca tttcaattgt tcaaggaaag      1260
     cttgtagaaa tacacaaatc ctgtggggga atcagcagtc aagaccagtt gggaaagcaa      1320
     ttaaagtatt tagagacacg tccaagtgat gtttctctaa ataacataaa aagtaagagg      1380
     gaaaagcata gaggtgctca aggctagggg accagaagag gcctcctccg ctgtggccct      1440
     ctctgcccaa cctctgtccc ttcctcagca cacttctgtg tctgcccacc ccttcccact      1500
     gtccacctca ttccattccg tctggtctcc acaccagcgt ttccctcggt ggcccacgct      1560
     cccggttccc gccgtccccg ctcttcctgg caaatggggg atcctggcca agggggccgc      1620
     cctgactcgg tcctcccccg caccctcccc cccccccgcc ccccgggcgg ctggaccata      1680
     aagcgcgggc tgcggccgcg gagcccagca cgccagcgcc cctccgacgg ctgcgcactg      1740
     ccctgcccgc cacctgcgcg ctcactgccc gaggccagca aacagcgccc tacgccggca      1800
     aagccacgcc acattgtcgc ctgcacagcc ctcagggagc agaagagtca ccatgccggc      1860
     cccacgcgcg gccgcggccg ccttcctcct gctgcacctg gtcctgcagc cgtggcagcg      1920
     gacgagcgcc caggccacac cccagggtaa gtggcttcct ttggtcccct ttgcatccag      1980
     ctaactgttg ctgtcctgag atcacctaga ggggccagtt ttgcactgct ctgcctgggc      2040
     tcctgaggcc ttgccatgca cctctctgtt cctccgggac cagaatggaa gtacatcgtt      2100
     attgaaagtg atgaggaaag tctagaattt tctccaattc ctttacccaa ccacaggacc      2160
     aattccttaa actatagttt ggaggggggt gcaaactagt tttcatcatt cactgtagaa      2220
     tgtgccacag ggtcattggt cctctggagg ggttgaaatc ctggttgtct gaagaccagt      2280
     gtctgttccc tccagtccct tctctcaggg aagccctggc accaagtggc accacccgtg      2340
     agcaatgctg ctttgctcca ccgccttccg tgcttcttac aatcaaaggt tagctccccc      2400
     cctcccccgg actcagtgtg gttacttgag actctttaga aatcgatctt tttctgtgaa      2460
     gaggcaaaaa aaaaaaaaaa aaaaaaaaaa aattcaatat ttgacaggga gttgaaataa      2520
     ttttcaggta gaaagcactt acggctaagc aaaatttcgt ataaagacca caaggaagca      2580
     attactacag ccaggaagga tctcggggct cgggcaggct gtgcacattg gccttcctcg      2640
     tgacactggg cacctggatt ggtttactat ggacgagaat gaggaaagcc agaagcagca      2700
     caggaggaga aaaaggtttc cttcccgagg ctgagcaaag cacgctgagc aggcagtctg      2760
     tgttcccttc cacgccacag tggccaccca ctgcacccaa cagtccagag gttattttct      2820
     gtaatataat atcttctgtt atataaattc ttgacattgg agcacacaac ttagtggtgt      2880
     aggttaggtt tggattctac ttctttagac cagacagtga agacttcgat tcaagtgata      2940
     taacctaact tatcctgtta acttagtttc tgcagacaat ctgattaagt caggtgtctg      3000
     gcagattctt ttatagaatt atcaagtcgg caatcagcag ctcaactgat tttaattcac      3060
     ttatctcctt ctcctctggg gccagctgct agccctgaat gagcaggtat tcaatccccg      3120
     tgctcatcgg tagcagtaat ttcacctcta acactagagg ctcattgctc agatcctggt      3180
     acttctactg aactgtaata gcgttaggta gcatcttatt tcctcctcaa aacactctct      3240
     aaagtcattg ctcacttacc caagctcaga ctcaagagca gaaatgaatc aaacggggag      3300
     ccaggcagac tgaagctctc atggagagcc agcgagatca caggccggat cgaagttgga      3360
     gccggcatga agcatcagga gtcagttcag aagacagttc tcagactctg aattttatgt      3420
     ctgtctccct gggagggtgc ccttatctag aacggagttt ttcaaagcac aacactttat      3480
     ccaaccttat cccccattgg tgggaatgat acattttcaa ttctttagaa attataaacc      3540
     cgtttttgta gcttgaggat gtggggcact agaaggatag gtgagatgtt ttgcttttca      3600
     actcagctag tattaaagtc gctattatgt gagggcttct agggggaaag aaacagcaga      3660
     gaaataaatt atctgtttaa aaaagtagac attctcaagt aactacggtt tttcctgttt      3720
     gccttaaatt tttattcagt ttttagtaga agcaacactt gttcattgta aaaaccaaac      3780
     ctaaccagaa ttgccagaac ataaacaaca acaaaaaagt cttatacaac ctagaaatag      3840
     ctactgttaa tataaagatg ttattgaatc aacttttgtt tcaaatcttt gtctaaacaa      3900
     ataaatcact aaagacagca agttatacgt atacataact ttgtaacttt ttataacttt      3960
     atcatgaaca aaaatgttct gtatgaaatt aactacattt caaaaacatg ggccaaaatt      4020
     aatttagtct gttttgtagt gtaggacact aaatttgtca ctggtattct gatatcatag      4080
     attagacatt ccgttagaaa atggaagtga tggatggctt ggactggcac cagccattgc      4140
     tttaactgta aagtctttct tctcttgaca ttttcacagc aaagtactca acccagagag      4200
     cttccatatt tccagtttct agtttcaccc agttccttcc ataactaaag aatctgtagg      4260
     ttcacaagtg atggtgaaca ttgtacctaa gtccgttatc tatcatttcc ttccaataca      4320
     gttctttaag tagatttgct aggtcaagag gcattgtgtt tcagagtctt tgatactgtt      4380
     acttaaacga ccttcagaat gttcatatcg atttgacctg atgacgtggc acagtgatag      4440
     tgagcctgtc gacatgcatg cggtcctggg ttcaatcccc actactggaa aaagagaatt      4500
     cttactaatt taaatcttac tgagcagaac atgtaagaat accttgaact ctcaactgca      4560
     gtgttaggta ttactatatt tttttttccc aatttgatag caaaaatagt gttatttaag      4620
     ttagcgattc tgtcattact aactaaaggg catatgaaca cttatttata tacctgttag      4680
     ccatttgtgg ttctttttct gtacattgcc tatttttctg ttaagatgat tgtcatcttg      4740
     ccagtttgta tgagctctct gttggtcatc agttcaccct tttagcaatc agactattgt      4800
     agacaagaga gatagccgtg ggcgctgaag ttcccggcca ggcagggaag tgcttacaca      4860
     atatctgtgt gcttcagtaa gcacatgctg taagtaccag tgtcaccact gtcagctttg      4920
     acagtggaca ttcagtggcc ctggacatac ttcccaggtc cgtgagtctc gggaaaaacc      4980
     acacacgtca ctttgtttcg tttccttgat gggatttttt taaaaacaga aaaactggga      5040
     aaccccacag gctctcacag aagtggcgag tcattttgct atactctgtg cgacaccata      5100
     tcgacgcgtg ctgcctcttt ccctgtcatg tcatggaacc agaagatgca tggcccaata      5160
     gcaccgaaag ggccccatct gtgcaatccg ctgcttgagg acataagaga ggcactgagc      5220
     tggttgctct catccaccac caccaccacc accaccgcct ctaccaccac caccactgcc      5280
     accctaccca ttgtgcttta agcttttagg gcttttccta ttggatattt tcagagctcc      5340
     ttgttcagcc aaatccactc ttgtgtttgc aaatctagag ttctcttcag ggctatagca      5400
     tgtcataaat attgtggtgc atttcttctg cttcaaatgt ccagccacta ttaaagacag      5460
     gaagaactgg tgaatttgtc tatgtgtgtg tgagagggga gggatgggga gagagaatag      5520
     caagatcagc tcacacagtt ttgtagctta ttgtcaaatg ctccccacca attaacaaag      5580
     acaacaaaaa gctttgccca aggttagtct tcagtgacca cacacttcct tctgtctctc      5640
     tagtctttga tcttctaccg tcctcaccgc agaggctgaa ccccagcgcc ctgcagccag      5700
     tcctgacaga tcccaccctg cacgaagtct atctcatctc caccttcaag ctgcagagta      5760
     aaagctcagc caccatcttt ggcctctact cctcaagtga caacagcaaa tactttgaat      5820
     tcactgtgat gggacggctg aacaaaggta agcctgctgc agggtttcca tggagggctc      5880
     ctggtcgggg attcagggtc tgccttccat tgcttgtttc ctttgggatg ccatgttcgt      5940
     cttactagac gcttacctgt gtgaaggtag ttgagagaga gaaacgaagg cttgcttatg      6000
     gccaatgtgt ctttcattac tatattatgt gagcagtagg tttcactatg gcattaatat      6060
     acatgcacgg aatgtgtttt cactgaattc accactacag cattgctcga ttttgtccca      6120
     ctggttccca gtttgtttgt ttgtttgtcc caacaagttc tccttctact tccattgttg      6180
     cggccaccag cagctcgcaa catgaatggt tcgactgaga aggctactcg agctgtaaga      6240
     gaggaatcta gacagggcga aagaagaaac ggagctaaga caaattcatt ctgatcaaag      6300
     ctcaaatttt attgttgcga cactagttat gaaggaaggg ggaggggacc tgattcccgc      6360
     cgaataatct cgggtccagt agtagggtga gcacgtggtg gcaccaacag caaagcggca      6420
     ctgtccagca gtgggcgtgg cagaacgaat gagcaggaag ctccacccct gagcaagcag      6480
     gtttcaggct gggggagggg agactacatt ccatgttttg aggggtttgt gtgtttgttt      6540
     gtttgtcata agccaatgca tttaattgga atcaggtaca gcagcacaag tgatgggatt      6600
     atttagagga cacgtaactg tcggtggcta caccactgaa gaagctgtct cctcccaccc      6660
     gccacccacc attagatctg agcacgcata gatccgtgag aagcattgga tcc             6713
//


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