Dbfetch
ID AF034744; SV 2; linear; mRNA; STD; MUS; 2793 BP.
XX
AC AF034744;
XX
DT 06-JAN-1999 (Rel. 58, Created)
DT 07-JAN-2017 (Rel. 131, Last updated, Version 6)
XX
DE Mus musculus semaphorin M-SemaK mRNA, complete cds.
XX
KW .
XX
OS Mus musculus (house mouse)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
XX
RN [1]
RP 1-2793
RX DOI; 10.1016/S0306-4522(99)00134-7.
RX PUBMED; 10430503.
RA Miyazaki N., Furuyama T., Sakai T., Fujioka S., Mori T., Ohoka Y.,
RA Takeda N., Kubo T., Inagaki S.;
RT "Developmental localization of semaphorin H messenger RNA acting as a
RT collapsing factor on sensory axons in the mouse brain";
RL Neuroscience 93(1):401-408(1999).
XX
RN [2]
RP 1-2793
RA Miyazaki N., Furuyama T., Inagaki S.;
RT ;
RL Submitted (16-NOV-1997) to the INSDC.
RL Neurobiology, School of Allied Health Sciences Osaka University Faculty of
RL Medicine, 1-7 Yamadaoka, Suita, Osaka 565, Japan
XX
RN [3]
RC Sequence update by database staff to remove vector contamination
RP 1-2793
RA Miyazaki N., Furuyama T., Inagaki S.;
RT ;
RL Submitted (05-JAN-2017) to the INSDC.
RL Neurobiology, School of Allied Health Sciences Osaka University Faculty of
RL Medicine, 1-7 Yamadaoka, Suita, Osaka 565, Japan
XX
DR MD5; fb9dba4e21086a47bec429b053beed80.
DR Ensembl-Gn; ENSMUSG00000063531; mus_musculus.
DR Ensembl-Tr; ENSMUST00000073957; mus_musculus.
XX
CC On Jan 5, 2017 this sequence version replaced gi:4104333.
XX
FH Key Location/Qualifiers
FH
FT source 1..2793
FT /organism="Mus musculus"
FT /strain="C57/Black 6"
FT /mol_type="mRNA"
FT /db_xref="taxon:10090"
FT CDS 265..2592
FT /codon_start=1
FT /product="semaphorin M-SemaK"
FT /db_xref="GOA:P70275"
FT /db_xref="InterPro:IPR001627"
FT /db_xref="InterPro:IPR003599"
FT /db_xref="InterPro:IPR007110"
FT /db_xref="InterPro:IPR013151"
FT /db_xref="InterPro:IPR013783"
FT /db_xref="InterPro:IPR015513"
FT /db_xref="InterPro:IPR015943"
FT /db_xref="InterPro:IPR016201"
FT /db_xref="InterPro:IPR027231"
FT /db_xref="InterPro:IPR036179"
FT /db_xref="InterPro:IPR036352"
FT /db_xref="MGI:MGI:1340034"
FT /db_xref="UniProtKB/Swiss-Prot:P70275"
FT /protein_id="AAD01996.1"
FT /translation="MAPAGHILTLLLWGHLLELWTPGHSANPSYPRLRLSHKELLELNR
FT TSIFQSPLGFLDLHTMLLDEYQERLFVGGRDLVYSLNLERVSDGYREIYWPSTAVKVEE
FT CIMKGKDANECANYIRVLHHYNRTHLLTCATGAFDPHCAFIRVGHHSEEPLFHLESHRS
FT ERGRGRCPFDPNSSFVSTLVGNELFAGLYSDYWGRDSAIFRSMGKLGHIRTEHDDERLL
FT KEPKFVGSYMIPDNEDRDDNKMYFFFTEKALEAENNAHTIYTRVGRLCVNDMGGQRILV
FT NKWSTFLKARLVCSVPGMNGIDTYFDELEDVFLLPTRDPKNPVIFGLFNTTSNIFRGHA
FT VCVYHMSSIREAFNGPYAHKEGPEYHWSLYEGKVPYPRPGSCASKVNGGKYGTTKDYPD
FT DAIRFARMHPLMYQPIKPVHKKPILVKTDGKYNLRQLAVDRVEAEDGQYDVLFIGTDTG
FT IVLKVITIYNQETEWMEEVILEELQIFKDPAPIISMEISSKRQQLYIGSASAVAQVRFH
FT HCDMYGSACADCCLARDPYCAWDGISCSRYYPTGAHAKRRFRRQDVRHGNAAQQCFGQQ
FT FVGDALDRTEERLAYGIESNSTLLECTPRSLQAKVIWFVQKGRDVRKEEVKTDDRVVKM
FT DLGLLFLRVRKSDAGTYFCQTVEHNFVHTVRKITLEVVEEHKVEGMFHKDHEEERHHKM
FT PCPPLSGMSQGTKPWYKEFLQLIGYSNFQRVEEYCEKVWCTDKKRKKLKMSPSKWKYAN
FT PQEKRLRSKAEHFRLPRHTLLS"
XX
SQ Sequence 2793 BP; 783 A; 658 C; 713 G; 638 T; 1 other;
cagcccggac ctggctctca agacgcgctc cttggacggt ctcttgctcc gcgcttctaa 60
ccaccgggcc caaggacaga aaggcttagc ggatccaaat attgcccggc aaatggcact 120
tgggaatggt attttctgat gacaacccct tctgtttgtg acaaagcctg tcgcccgcag 180
ttgcccctgg agggaagtac taagtaaaac tcaatcctgt cttaaagtgt ggctgcaggg 240
gccagaggag agccagcacg caccatggca ccggccggac acatcctcac cttgctgctc 300
tggggtcacc tgctggaact ctggacccca ggtcactccg cgaacccctc ctaccccagg 360
ctacgcctgt cacataaaga acttttggaa ctgaatagga cttcaatatt tcaaagcccc 420
cttggatttc ttgatctcca tacaatgctg ctggatgagt atcaagaacg gctctttgtg 480
ggaggcagag accttgtcta ttccctgaac ttggaacgag tcagtgacgg ctacagagag 540
atatactggc cgagcacagc agtaaaggta gaagaatgca taatgaaagg aaaagacgca 600
aatgagtgtg ccaattatat ccgggttttg catcactaca acaggacaca ccttctgacc 660
tgtgctactg gagcttttga tccacactgt gccttcatca gagtcgggca ccattcagag 720
gaacccctgt ttcacctgga gtcacacaga tctgagagag gaaggggcag atgtcctttt 780
gaccccaact cctcctttgt gtccacgcta gttgggaatg agctgtttgc tggactctac 840
agtgactatt ggggcagaga ctcggcgatc ttccgcagca tggggaagtt aggccatatt 900
cgcactgagc atgacgatga gcggctcctg aaagaaccaa aatttgtagg ttcatatatg 960
attcctgata acgaagaccg agatgacaac aaaatgtact ttttctttac tgagaaggcg 1020
ctggaggcgg agaacaacgc ccacacgatc tacacccgag tggggcggct gtgcgtgaat 1080
gacatgggag gacagagaat cctggtgaac aagtggagca ctttccttaa agcgcggctg 1140
gtttgctcag tgccgggaat gaatggaatc gacacatact ttgacgaact agaggatgtg 1200
tttttactgc cgaccagaga tcctaagaat ccagtgatat ttggactgtt taatactacc 1260
agcaatatat ttagaggcca tgctgtatgt gtgtatcaca tgtcaagtat ccgggaagcc 1320
tttaatggcc catatgctca taaagaaggc cctgaatacc actggtcact atatgaagga 1380
aaagtcccct acccaaggcc tggttcctgt gccagcaaag taaacggagg caagtatgga 1440
accaccaaag attaccccga tgacgccatc cggttcgcaa ggatgcatcc tctaatgtat 1500
cagcccataa aacctgttca taaaaaacca atactggtaa aaacagatgg aaaatacaac 1560
ctgaggcaac ttgccgtgga tcgggtggaa gcggaggatg gccagtatga cgtcttattt 1620
attgggacag acacaggaat tgtgctgaaa gtaatcacaa tttacaacca agaaacagag 1680
tggatggagg aagtcattct agaggaactt caaatattca aggatccagc ccctatcatt 1740
tctatggaaa tttcttcaaa gagacaacag ctttacattg gatcagcctc tgctgtggca 1800
caagtcagat tccatcactg cgacatgtat ggcagtgctt gtgctgactg ctgcctggct 1860
cgagacccgt actgtgcctg ggatggcata tcctgctcca ggtactaccc aacaggtgca 1920
cacgcaaaga ggaggttccg caggcaggac gttcggcatg gcaacgccgc ccaacagtgc 1980
tttggacagc aatttgttgg agacgcgttg gacaggactg aagagaggct ggcttatggc 2040
atagagagca acagtactct gttggaatgc accccgcgat cactacaagc aaaagtcatc 2100
tggtttgtac agaagggacg cgacgtaaga aaagaagagg tgaagacgga tgacagagtt 2160
gtcaagatgg acttgggctt gctcttcctc agagtacgca agtcagatgc agggacctat 2220
ttttgccaga cagtagaaca caattttgtc catactgtgc gtaaaatcac cttggaggtg 2280
gtcgaagagc ataaagtgga gggcatgttt cataaggacc atgaagagga aagacatcac 2340
aagatgccct gccctccctt aagcggtatg tctcagggga caaaaccgtg gtacaaggaa 2400
ttcttgcagc tgattggcta cagcaacttc cagagagtgg aagaatactg cgaaaaggtg 2460
tggtgtacag ataagaagag gaaaaagctt aaaatgtctc cctccaagtg gaagtatgcc 2520
aacccccagg aaaagaggct tcgctctaaa gctgagcact tccgcctgcc caggcacacg 2580
ctgctctcct gagggcgccc tctgccggcg gctgaggaac ctaggatgga aacatttttt 2640
taaagggggg gaaaaaaaaa agactgaaag catgcagtct ctttccatta cttcaaagaa 2700
ctttctgtag tactnagagg ctgggaaggt gttttaagtt attctgcata ttcatctgac 2760
tgtacaaaca tctctctcac agtacttggt act 2793
//
