Dbfetch
ID AF030199; SV 1; linear; genomic DNA; STD; MUS; 6973 BP.
XX
AC AF030199;
XX
DT 26-JAN-1998 (Rel. 54, Created)
DT 14-NOV-2006 (Rel. 89, Last updated, Version 2)
XX
DE Mus musculus type 1 sigma receptor gene, complete cds.
XX
KW .
XX
OS Mus musculus (house mouse)
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Mus; Mus.
XX
RN [1]
RP 1-6973
RX DOI; 10.1006/bbrc.1997.7840.
RX PUBMED; 9425306.
RA Seth P., Leibach F.H., Ganapathy V.;
RT "Cloning and structural analysis of the cDNA and the gene encoding the
RT murine type 1 sigma receptor";
RL Biochem. Biophys. Res. Commun. 241(2):535-540(1997).
XX
RN [2]
RP 1-6973
RA Seth P., Leibach F.H., Ganapathy V.;
RT ;
RL Submitted (15-OCT-1997) to the INSDC.
RL Biochemistry, Molecular Biology, 15th Street, Augusta, GA 30912-2100, USA
XX
DR MD5; ca14f75fd9f0f758e5fdd5a6841889ec.
DR Ensembl-Gn; ENSMUSG00000036078; mus_musculus.
DR Ensembl-Gn; MGP_129S1SvImJ_G0028171; mus_musculus_129s1svimj.
DR Ensembl-Gn; MGP_AJ_G0028129; mus_musculus_aj.
DR Ensembl-Gn; MGP_AKRJ_G0028092; mus_musculus_akrj.
DR Ensembl-Gn; MGP_BALBcJ_G0028142; mus_musculus_balbcj.
DR Ensembl-Gn; MGP_C3HHeJ_G0027880; mus_musculus_c3hhej.
DR Ensembl-Gn; MGP_C57BL6NJ_G0028583; mus_musculus_c57bl6nj.
DR Ensembl-Gn; MGP_CASTEiJ_G0027325; mus_musculus_casteij.
DR Ensembl-Gn; MGP_CBAJ_G0027842; mus_musculus_cbaj.
DR Ensembl-Gn; MGP_DBA2J_G0027986; mus_musculus_dba2j.
DR Ensembl-Gn; MGP_FVBNJ_G0027953; mus_musculus_fvbnj.
DR Ensembl-Gn; MGP_LPJ_G0028094; mus_musculus_lpj.
DR Ensembl-Gn; MGP_NODShiLtJ_G0027985; mus_musculus_nodshiltj.
DR Ensembl-Gn; MGP_NZOHlLtJ_G0028641; mus_musculus_nzohlltj.
DR Ensembl-Gn; MGP_PWKPhJ_G0027044; mus_musculus_pwkphj.
DR Ensembl-Gn; MGP_WSBEiJ_G0027401; mus_musculus_wsbeij.
DR Ensembl-Tr; ENSMUST00000059354; mus_musculus.
DR Ensembl-Tr; ENSMUST00000071561; mus_musculus.
DR Ensembl-Tr; MGP_129S1SvImJ_T0065163; mus_musculus_129s1svimj.
DR Ensembl-Tr; MGP_AJ_T0065196; mus_musculus_aj.
DR Ensembl-Tr; MGP_AKRJ_T0065132; mus_musculus_akrj.
DR Ensembl-Tr; MGP_BALBcJ_T0065117; mus_musculus_balbcj.
DR Ensembl-Tr; MGP_C3HHeJ_T0064844; mus_musculus_c3hhej.
DR Ensembl-Tr; MGP_C57BL6NJ_T0065603; mus_musculus_c57bl6nj.
DR Ensembl-Tr; MGP_CASTEiJ_T0065156; mus_musculus_casteij.
DR Ensembl-Tr; MGP_CBAJ_T0064755; mus_musculus_cbaj.
DR Ensembl-Tr; MGP_DBA2J_T0064878; mus_musculus_dba2j.
DR Ensembl-Tr; MGP_FVBNJ_T0064826; mus_musculus_fvbnj.
DR Ensembl-Tr; MGP_LPJ_T0065010; mus_musculus_lpj.
DR Ensembl-Tr; MGP_NODShiLtJ_T0064826; mus_musculus_nodshiltj.
DR Ensembl-Tr; MGP_NZOHlLtJ_T0065820; mus_musculus_nzohlltj.
DR Ensembl-Tr; MGP_PWKPhJ_T0064675; mus_musculus_pwkphj.
DR Ensembl-Tr; MGP_WSBEiJ_T0064054; mus_musculus_wsbeij.
XX
FH Key Location/Qualifiers
FH
FT source 1..6973
FT /organism="Mus musculus"
FT /strain="129SV"
FT /mol_type="genomic DNA"
FT /db_xref="taxon:10090"
FT mRNA join(3269..3496,3622..3822,3956..4048,5018..6089)
FT /product="type 1 sigma receptor"
FT exon 3269..3496
FT /number=1
FT CDS join(3346..3496,3622..3822,3956..4048,5018..5244)
FT /codon_start=1
FT /product="type 1 sigma receptor"
FT /note="mSigmaR1"
FT /db_xref="GOA:O55242"
FT /db_xref="InterPro:IPR006716"
FT /db_xref="MGI:MGI:1195268"
FT /db_xref="UniProtKB/Swiss-Prot:O55242"
FT /protein_id="AAB97683.1"
FT /translation="MPWAAGRRWAWITLILTIIAVLIQAAWLWLGTQNFVFSREEIAQL
FT ARQYAGLDHELAFSRLIVELRRLHPGHVLPDEELQWVFVNAGGWMGAMCILHASLSEYV
FT LLFGTALGSHGHSGRYWAEISDTIISGTFHQWKEGTTKSEVFYPGETVVHGPGEATALE
FT WGPNTWMVEYGRGVIPSTLFFALADTFFSTQDYLTLFYTLRAYARGLRLELTTYLFGQD
FT S"
FT exon 3622..3822
FT /number=2
FT exon 3956..4048
FT /number=3
FT exon 5018..6089
FT /number=4
XX
SQ Sequence 6973 BP; 1753 A; 1675 C; 1648 G; 1896 T; 1 other;
ctgggtattg tttgcttaca gcaactaaga ttacataccc taagtcatat agactggagc 60
catgttactg tctatcacac agctagtggt taaggctgag aggacgggat tatttattta 120
tgaggaactg tatttatgat ggaatgtgaa agggcaatga actagagagg tctcagtggt 180
cttagaaaat tgtcaactta gggataacat agaagccagc agctgtttca aaacacgttt 240
cctcaacctt tcatcctcaa ctagattact caaaactaac aaatacacaa cagttcacct 300
ccccagcctc tggtctctgt agcacaatat attgcaacat gggcaagtga aaggcaacag 360
agcaaagact tattagaatg gcttaaaggc ccagatagtc caacaatggc tgcctaccaa 420
tggaaggtcc aagaattcag tttttcagtc caatgaggct gatatctcag cttgtcttca 480
gtatatgctg gaatcccaaa gaagtaagct ctaatgccat gagaaggaat ggacttgcca 540
tcaagagcaa aggcaggtct gcaaagagga ggcacatctc ctacttctgt gtcccttata 600
taggctgcca gcagaaggta tggtccaaaa ttaataatgt atcttcctat ctcaacgatc 660
tggctcagaa gtaagtcttc ccacatcaga tggggttttt ttggttgttg ttgttggttt 720
ttttgttttg ttttgttttt tgttttgttt tgagacaggg cttctctgta tagccctggc 780
tgtcttggaa ctcactttgt agaccaggct ggccttgaac tcagaaatcc gcctgcctct 840
gcctcccgag tgctgggatt aaaggcatgc accaccacgc ccggctcaca tcaaatgatt 900
taattaaaga acaaaataaa ccctcacagg tgttttttga gtttcagatg tagtcaagtt 960
gatgaccaag aagaaccact atattatact tgtagtatta aaatccatcc tgcaagaatt 1020
cctttagcag gatggaaacc aactcaaaac agcttcagga agtccctgaa actgaccaaa 1080
tttactagac tcctccctgc tatagtaagc aataaatgct gagagtccca tttagacaaa 1140
gtgaagccaa gctgcaaaaa agtatcttga gaccagacta gtcctgaaga aacagactag 1200
tcaagctgct tgggagaggt ttagactaga gtctcttgaa aaggacacta caacctgtag 1260
agccttcagg ctgcttccag gttttgtgag ctgtcaccca tgctgggctg ggctttggtg 1320
atgcagctgt ctttgactct gatttctgtt cctgcaagta actcctcacc cacagtccag 1380
caagtaaccc caataaaact cattagttca ccaaattgga ttttggtggt atctgtactt 1440
tcaattgtca taggctccct atctgaagtg tgttgtgttt cctcaggaaa cattttgtca 1500
cacaacaata agtcttctga aattgggcaa aggtgaaaaa gagagaggac agaatttctt 1560
ttttttttaa atatatgtat tggtgttttg cctgcatgta tgccagtata tcatgtgggt 1620
acaattccca cagaggctag aaggagtcaa atctactgga actgagctac aaacagttgt 1680
gagccaccat atgcatgcta tgaatcaaat caagatcctc tggaaaagca gaagagcagc 1740
tagtgctgtt aaccacggag gcatctctcc agcctcaaga tttcacatat ttttagaaac 1800
tagacctgaa aatgtcttac agcatttctg tttccatttt attatctgga ataaaaccac 1860
ctgggtacat ggccccatat acagagatta tagaatgtat tttggtcgct caagagcaaa 1920
aggaaagccg ggcatggtgg cgcacacctt taatcccagc actcagaagg cagaagcagg 1980
cagatttctg agttcaaggc cagcctggtc tacaaagtga gttccaggac agccagggct 2040
atacagaaga aaccctgtct caaaacaaaa caaaacaaaa caaaacaacc aaaaaaaaaa 2100
gcaaaaagaa atgtctctgc cacataaaaa tgccatgaaa agccattccc catgtttcgt 2160
gaacccctcc cttatatttg cctgatggat ttcattccat cagttctttg tgttctagct 2220
cctttatggg tttggctgtt gttcttgttg ttgctttaga catggtttcc tgaggcctct 2280
gctgactttt gctatggtga ccttgaactg atcttggtgc cttcccacgt tctagaatta 2340
caagcaatac atgtcttaca ttgtcttttt ctaactaaca tgtataatcc taaccatgtg 2400
ccaggcacta attactttaa aaaattaatt catttaatgt taatcataat gaaggtatgg 2460
gctacgaagc agatactttt taatttagtc tatgttacag ataaagctat caatgcatac 2520
tcttaaatgc tgacacatat gggctctctg tcttagatct tagtccaatt ttgctcccct 2580
cctctattta gcccagaatc attctgtgtc aacatcgaat cccatagctc cccagtggac 2640
aaatctattg gttttcaagg tctttcacac ttttgtgctt cagaacatag aatgaatcat 2700
aggatcggag aaaacactaa gctaaacatg catggtggtg cgcgcccctg atcccagtat 2760
tggagaggca tcgatcgagg ctatcctagt ctataggcta gctaaagttg tctaaaatat 2820
tacaaatata tgtacacata catatataca taaatgcatg tatgctgtct cacactcctc 2880
tgctctttga ctcctggaat agttcccatt gactctctct ctctctcatg gacacttcag 2940
atatcaccgc ttctttccta aggttcccag tggcactatc ttcaacctgc ttctgtgcta 3000
gcagacctag aaagctctac ttctgggctc gctagctcag gtgggccagt ccattctggg 3060
tctccccgct tggggacacc aagattgaac ccaacagggt ggcagccagg aggcgaggcc 3120
ccgcctctca cctctcttgc agaccaagcc actaaaccta cgctctcccc tctagaaaat 3180
ggttcaatcc agaggcggtg ctaggtgacc cggacgttcc gattggcccc ggcgagccgt 3240
accacggtgg cgggggcgac cgtaggcagc ggcttttgag tcgtgaaccc acagcctgtg 3300
gccctagttc ggtcttacgt tggtggtgcc aggctgcccg ctagaatgcc gtgggccgcg 3360
ggacggcggt gggcatggat caccctgatt ctgactatta tcgcagtgct gatccaggcc 3420
gcctggttgt ggctgggcac tcaaaacttc gtcttctcta gagaagaaat agcgcagctt 3480
gctcgacagt atgcgggtga gccggtgagg gcggagagtg gggtggccga cacggagcgg 3540
agccgcgctt tccgagggct ggtcctcgcc aagcttcaga ccgcgggctg gtctcacccg 3600
cgcttctcct ttttgcacca gggctggacc atgagcttgc cttctctcgg ctgatcgtgg 3660
agctgcggag gctgcaccca ggccacgtgc tgccggatga ggagctgcag tgggtatttg 3720
tgaacgcggg cggctggatg ggcgccatgt gtattctgca cgcctcgctg tctgagtacg 3780
tgctgctctt cggcaccgcc ctgggctccc atggccattc gggtcagtgt tggcggtggg 3840
tcggattggg aggctgggac tgttcgaggg ccggtgccct ccattccaag gtttggctgg 3900
gccgtgtatt gacaaggatt ccctgatggt cggtgtctat tttactgtca atcaggacga 3960
tactgggctg agatttctga caccatcatc tctggcacct tccaccaatg gaaagagggc 4020
accacgaaaa gtgaggtctt ctacccaggt gcgtaaggaa gttctgtccg agggggcgcc 4080
ctctagatag ggacgggcat aagacttgga aagggcgtgt ttaagaaggc ctaccagtga 4140
tttccttcct tccctccctg gtaagccaca ggtgtttcgt tagggtcgag ctaggaaccc 4200
tgatgctttc gactgttaag ggaaacagaa cacggcagtt tccaagtcat agagaacttg 4260
atttttttta tcagcctgtt taacccagca attatctggg ttatacccaa aagttaagac 4320
aggcatttgt ttccttaaac tagagtggca gtttggggtt tttgtatttt tgttattgtt 4380
tgtttttatg cgtctgggtt ttgcttacac acaccaaccc cttaactgcc tggtgcctta 4440
aaggccagaa gagggcatct gatcccagag actgaagtta tagactgttg tgagccttca 4500
tgtgggtgct gggaagtgaa cctgggtcct ctggagtagg agccagggca cagctgagcc 4560
atctggctag caaactcctg gtggtgtttt tttaatgtac ctctgaatct gtttaaaaga 4620
aaaaaaggcg tgggcttgct ggtgtaaggt taagcatcac actttgtgac tgaacaggcg 4680
catttctcag agagcctggc aagccctgta accacacaga atttccacca gatatgattg 4740
cagcttggaa atgcagatgc cataattcta tacgttagcc tgtagctggg ttggggtggc 4800
cttccaaggg ccaggtgatg ccattggtat aagtgttttg gtctttgtcc tctgatcaag 4860
cagcttggca tagggtagaa gaactttttc ttttcttgaa actgtctttt cattcccctc 4920
ctctccatag atagcccata ggctagacaa atgcagtatg gaaggccagg gcagagctgg 4980
gctcctcatg aggtttctta tcctgtctgt ctcccaggag agacagttgt acacgggcct 5040
ggagaagcaa cggctctgga gtggggacca aacacgtgga tggtggagta cggccggggt 5100
gttattccgt ctaccctgtt ctttgcacta gccgacactt tcttcagcac ccaggactac 5160
ctcacactct tctataccct tcgggcctat gcccggggcc tccggcttga gcttaccacc 5220
tacctctttg gccaagactc ctgaccagcc aggcctgaag gaagatctgt ggatggacag 5280
gagcgcggca ggaccacatc catctctcta ctcgctggaa ctcatattca gacagcagcg 5340
tataccatgc agatattaag tacctgctgt atgaggaagg acatacatac ttgtacatcc 5400
agacacagct cttgggaagc aaatgagaca cagagatgct aagacttgta tgtactgtaa 5460
gatcatgcac tcacatccac ccagaaaggg tcctctacat atactccagg gggccagtca 5520
tgtttgaaca cacatcacaa gcttgactca ctgactcagg ctttcctaga gcctcctgct 5580
ggcattcagg gctctgggat caagggttga ggtagatgtt acacactacc tcactctgat 5640
gcctcattcc tgtagtaatc tctggtgaag ggaaagagga gctgcccttc ggaggtcccc 5700
ttcacctgca gctatgatgc ccttcccttc atccctttcc tcaccatatg ccttatctcc 5760
attccactcc cctgctatgc aaatgccccc ctggcttgtc ctccctgccc ccccccggca 5820
accagttcag ctgggaaagc agaggnatgt agaggatgct aaagggaagg gaggtcctcc 5880
actacggaga cccttgttgg ggttagattg gaaaagctgg ctagtgcccc agggcccagt 5940
tcccaaggag aggacctgga gaagtaagcc ggggtccaag gagccacccc attccaaaag 6000
aagcctttag tgtgtgtgtg cacaccctat cagtttccag acatatctgt tgcaatctct 6060
gtcttcttgt ctctctctgt taataaaaac atattaaaca gtttcgtttc cttatgtgtc 6120
taaacagcag ggaagccagc tgcctcctgg ggcactaaaa ggcctcctgt acaatccagt 6180
ttgtaagaca aggtttagac agaagggagt gtgctaagaa ttactttgaa gtcagccttc 6240
taggggtggt ggtgttaaac ctttggctct agactcagct ctgcctgctg ttggcatctg 6300
agtgttggaa ctggaagtga gcaccaccac acccagagtg ccccccccca ccccccgcaa 6360
tataaagctg acttagaatt tacgatgtga tactgaaatt caccgtgaac ttaacctcca 6420
gcttccactt cctaggactg agaattaagg ccaaggcttt gtgcagtctg ggcaagcgct 6480
gtgctaacca cacccttaga agacagatga gtcactgagg ctggctggct tgcatctata 6540
gagataaatt ttttttttaa ttttatttct ttttttatat gagtacactg cagctgtctt 6600
cagacacaca ctagaagggt gctttggatt ccatgacaga tggttgtgag ctaccatgtg 6660
gttgctggga tttgaactca ggatctctga cagagcagtc agtgttctta tctgctgagc 6720
cgtctctcca gcccctcgag ataagttttt gaatatgaaa aaatgagacc cgtgtgtcta 6780
ctttgctagt ctgtcctaga ggtggtcctg agaacttcac tgcacatggc catggggtgg 6840
cactgtgctc ccacatttga gctgaaacag acctcagctg gttcttccgg gctgacagaa 6900
tagagtacac cactaactgg aacaagagtt cctctgctct ggtttgcctt tgacccagca 6960
cttattgcga gct 6973
//