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EBI Dbfetch

LOCUS       YP_001876438              95 aa            linear   VRL 24-DEC-2009
DEFINITION  small membrane protein [Beluga Whale coronavirus SW1].
ACCESSION   YP_001876438
VERSION     YP_001876438.1  GI:187251957
DBLINK      BioProject: PRJNA29509
DBSOURCE    REFSEQ: accession NC_010646.1
KEYWORDS    RefSeq.
SOURCE      Beluga Whale coronavirus SW1
  ORGANISM  Beluga Whale coronavirus SW1
            Viruses; ssRNA positive-strand viruses, no DNA stage; Nidovirales;
            Coronaviridae; Coronavirinae; Gammacoronavirus.
REFERENCE   1  (residues 1 to 95)
  AUTHORS   Mihindukulasuriya,K.A., Wu,G., St Leger,J., Nordhausen,R.W. and
            Wang,D.
  TITLE     Identification of a novel coronavirus from a beluga whale by using
            a panviral microarray
  JOURNAL   J. Virol. 82 (10), 5084-5088 (2008)
   PUBMED   18353961
REFERENCE   2  (residues 1 to 95)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-MAY-2008) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 95)
  AUTHORS   Mihindukulasuriya,K.A., Wu,G., St. Leger,J. and Wang,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2007) Molecular Microbiology, Washington
            University, 660 South Euclid Avenue, St. Louis, MO 63110-1093, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to ABW87821.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..95
                     /organism="Beluga Whale coronavirus SW1"
                     /isolate="SW1"
                     /isolation_source="whale liver"
                     /host="Delphinapterus leucas (beluga whale)"
                     /db_xref="taxon:694015"
                     /group="3"
     Protein         1..95
                     /product="small membrane protein"
                     /name="E protein"
                     /calculated_mol_wt=10604
     Region          1..88
                     /region_name="IBV_3C"
                     /note="IBV 3C protein; pfam03620"
                     /db_xref="CDD:146320"
     CDS             1..95
                     /locus_tag="CoVSW1_gp04"
                     /coded_by="NC_010646.1:24874..25161"
                     /db_xref="GeneID:6264434"
ORIGIN      
        1 msaisdwfya ngmffsclyi llgliaiyiv gkvltvfvqa idvcllfckg wavdpsvrlv
       61 syaygvlpkq pklnfedier vplsfprnsk dgeyv
//



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