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EBI Dbfetch

LOCUS       NW_001031896           11833 bp    DNA     linear   CON 09-FEB-2015
DEFINITION  Mus musculus strain mixed unplaced genomic scaffold, alternate
            assembly Mm_Celera 232000009668674, whole genome shotgun sequence.
ACCESSION   NW_001031896
VERSION     NW_001031896.1  GI:83009289
DBLINK      BioProject: PRJNA16113
            BioSample: SAMN03004379
            Assembly: GCF_000002165.2
KEYWORDS    WGS; RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia;
            Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 11833)
  AUTHORS   Mural,R.J., Adams,M.D., Myers,E.W., Smith,H.O., Miklos,G.L.,
            Wides,R., Halpern,A., Li,P.W., Sutton,G.G., Nadeau,J.,
            Salzberg,S.L., Holt,R.A., Kodira,C.D., Lu,F., Chen,L., Deng,Z.,
            Evangelista,C.C., Gan,W., Heiman,T.J., Li,J., Li,Z., Merkulov,G.V.,
            Milshina,N.V., Naik,A.K., Qi,R., Shue,B.C., Wang,A., Wang,J.,
            Wang,X., Yan,X., Ye,J., Yooseph,S., Zhao,Q., Zheng,L., Zhu,S.C.,
            Biddick,K., Bolanos,R., Delcher,A.L., Dew,I.M., Fasulo,D.,
            Flanigan,M.J., Huson,D.H., Kravitz,S.A., Miller,J.R., Mobarry,C.M.,
            Reinert,K., Remington,K.A., Zhang,Q., Zheng,X.H., Nusskern,D.R.,
            Lai,Z., Lei,Y., Zhong,W., Yao,A., Guan,P., Ji,R.R., Gu,Z.,
            Wang,Z.Y., Zhong,F., Xiao,C., Chiang,C.C., Yandell,M.,
            Wortman,J.R., Amanatides,P.G., Hladun,S.L., Pratts,E.C.,
            Johnson,J.E., Dodson,K.L., Woodford,K.J., Evans,C.A., Gropman,B.,
            Rusch,D.B., Venter,E., Wang,M., Smith,T.J., Houck,J.T.,
            Tompkins,D.E., Haynes,C., Jacob,D., Chin,S.H., Allen,D.R.,
            Dahlke,C.E., Sanders,R., Li,K., Liu,X., Levitsky,A.A.,
            Majoros,W.H., Chen,Q., Xia,A.C., Lopez,J.R., Donnelly,M.T.,
            Newman,M.H., Glodek,A., Kraft,C.L., Nodell,M., Ali,F., An,H.J.,
            Baldwin-Pitts,D., Beeson,K.Y., Cai,S., Carnes,M., Carver,A.,
            Caulk,P.M., Center,A., Chen,Y.H., Cheng,M.L., Coyne,M.D.,
            Crowder,M., Danaher,S., Davenport,L.B., Desilets,R., Dietz,S.M.,
            Doup,L., Dullaghan,P., Ferriera,S., Fosler,C.R., Gire,H.C.,
            Gluecksmann,A., Gocayne,J.D., Gray,J., Hart,B., Haynes,J.,
            Hoover,J., Howland,T., Ibegwam,C., Jalali,M., Johns,D., Kline,L.,
            Ma,D.S., MacCawley,S., Magoon,A., Mann,F., May,D., McIntosh,T.C.,
            Mehta,S., Moy,L., Moy,M.C., Murphy,B.J., Murphy,S.D., Nelson,K.A.,
            Nuri,Z., Parker,K.A., Prudhomme,A.C., Puri,V.N., Qureshi,H.,
            Raley,J.C., Reardon,M.S., Regier,M.A., Rogers,Y.H., Romblad,D.L.,
            Schutz,J., Scott,J.L., Scott,R., Sitter,C.D., Smallwood,M.,
            Sprague,A.C., Stewart,E., Strong,R.V., Suh,E., Sylvester,K.,
            Thomas,R., Tint,N.N., Tsonis,C., Wang,G., Wang,G., Williams,M.S.,
            Williams,S.M., Windsor,S.M., Wolfe,K., Wu,M.M., Zaveri,J.,
            Chaturvedi,K., Gabrielian,A.E., Ke,Z., Sun,J., Subramanian,G.,
            Venter,J.C., Pfannkoch,C.M., Barnstead,M. and Stephenson,L.D.
  TITLE     A comparison of whole-genome shotgun-derived mouse chromosome 16
            and the human genome
  JOURNAL   Science 296 (5573), 1661-1671 (2002)
   PUBMED   12040188
  REMARK    Erratum:[Science 2002 Aug 23;297(5585):1278]
COMMENT     REFSEQ INFORMATION: The reference sequence is identical to
            CH468438.1.
            Assembly Name: Mm_Celera
            The DNA sequence was generated by Celera therapeutics using a Whole
            Genome Shotgun (WGS) approach. The sequence is composed of DNA from
            five different mouse strains: A/J, DBA/2J, 129X1/SvJ, 129S1/SvImJ
            and C57BL/6J. The C57BL/6J reads were sequenced as part of a
            publicly funded sequencing effort and obtained from the NCBI Trace
            Archive. The original whole genome shotgun project has the
            accession AAHY00000000.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Mus musculus Annotation Release 105
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11833
                     /organism="Mus musculus"
                     /mol_type="genomic DNA"
                     /strain="mixed"
                     /db_xref="taxon:10090"
                     /chromosome="Unknown"
     assembly_gap    2372..10523
                     /estimated_length=8152
                     /gap_type="within scaffold"
                     /linkage_evidence="unspecified"
CONTIG      join(AAHY01199145.1:1..2371,gap(8152),AAHY01199146.1:1..1310)
//



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