Dbfetch
LOCUS NM_182305 938 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Nematode cuticle collagen N-terminal domain-containing protein (col-107), mRNA. ACCESSION NM_182305 VERSION NM_182305.4 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 938) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 938) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 938) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 938) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Sep 4, 2019 this sequence version replaced NM_182305.3. FEATURES Location/Qualifiers source 1..938 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="IV" gene 1..938 /gene="col-107" /locus_tag="CELE_C34H4.4" /db_xref="GeneID:176961" /db_xref="WormBase:WBGene00000681" CDS 14..898 /gene="col-107" /locus_tag="CELE_C34H4.4" /standard_name="C34H4.4" /note="Confirmed by transcript evidence" /codon_start=1 /product="Nematode cuticle collagen N-terminal domain-containing protein" /protein_id="NP_872105.1" /db_xref="EnsemblGenomes-Gn:WBGene00000681" /db_xref="EnsemblGenomes-Tr:C34H4.4b" /db_xref="GeneID:176961" /db_xref="GOA:Q86S35" /db_xref="InterPro:IPR002486" /db_xref="InterPro:IPR008160" /db_xref="UniProtKB/TrEMBL:Q86S35" /db_xref="WormBase:WBGene00000681" /translation="MSTKAIVIGASFFSGVTIIVSLVAAGMLLQDINDLYYDVMDDMT EFRNTANEAWKDMIVPSGAVDASLIFGRNKRSGGTCGCGAQPNNCPAGPAGPPGAPGA PGEDGTPGQAGKNGGNGIGIVNSADAGGCIKCPAGEPGPAGPDGPAGAPGADGQPGAP GNAGQDGAPGAAGEQGDAGAAGQDGEAGAPGGPGKNGQRGSGAPGPAGPEGPAGPAGQ DGAPGQDGAPGNAGSEGPAGAPGKDGEAGAPGQDGEAGGEGIPGQDAAYCPCPPRTAA VEATPASQGGYRRRFSHV" ORIGIN 1 gtcacattca gcaatgagta ccaaagccat cgttattgga gcgtctttct tctccggagt 61 cacgattatc gtgtctctgg ttgccgccgg tatgctcctt caggacatca atgacttgta 121 ctacgatgtg atggatgaca tgactgagtt cagaaacacc gccaatgaag cctggaagga 181 catgatcgtt ccatcaggag ccgtcgacgc cagccttatc ttcggacgta acaagagatc 241 cggcggaact tgcggatgcg gagcacagcc aaacaactgc ccagctggac cagccggacc 301 accaggagcc ccaggagctc caggagagga cggaacccca ggacaagccg gaaagaacgg 361 aggaaacgga atcggaatcg tcaactccgc cgacgccgga ggttgcatca agtgcccagc 421 cggagagcca ggaccagccg gaccagacgg accagccgga gccccaggag ccgacggaca 481 gccaggagcc ccaggaaacg ccggacaaga cggagcccca ggagccgctg gtgagcaagg 541 agacgccgga gccgccggac aagacggaga agccggagca ccaggaggcc caggaaagaa 601 cggacaacgc ggatccggag ccccaggacc agccggacca gaaggaccag ccggaccagc 661 cggacaagac ggagcaccag gacaagacgg agccccagga aacgccggat cagaaggacc 721 agccggagcc ccaggaaagg acggagaagc cggagctcca ggacaagacg gagaggccgg 781 aggcgaggga attccaggcc aagacgctgc ctactgccca tgcccaccac gtaccgccgc 841 tgtcgaggcc accccagctt cccagggagg atacagacgt cgtttctctc acgtctaagg 901 attttaacat tctcaaaaat aaacgatttt tcattcac //