Dbfetch
LOCUS NM_181972 3111 bp mRNA linear INV 15-APR-2020 DEFINITION Caenorhabditis elegans Nuclear Pore complex Protein (npp-9), mRNA. ACCESSION NM_181972 VERSION NM_181972.6 DBLINK BioProject: PRJNA158 BioSample: SAMEA3138177 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 3111) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 3111) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (14-APR-2020) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 3111) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (14-FEB-2020) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 3111) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003281). On Apr 15, 2020 this sequence version replaced NM_181972.5. FEATURES Location/Qualifiers source 1..3111 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="III" gene 1..3111 /gene="npp-9" /locus_tag="CELE_F59A2.1" /db_xref="GeneID:175443" /db_xref="WormBase:WBGene00003795" CDS 106..2760 /gene="npp-9" /locus_tag="CELE_F59A2.1" /standard_name="F59A2.1b" /note="Product from WormBase gene class npp; Partially confirmed by transcript evidence" /codon_start=1 /product="Nuclear Pore complex Protein" /protein_id="NP_871701.1" /db_xref="EnsemblGenomes-Gn:WBGene00003795" /db_xref="EnsemblGenomes-Tr:F59A2.1b.1" /db_xref="EnsemblGenomes-Tr:F59A2.1b.2" /db_xref="EnsemblGenomes-Tr:F59A2.1b.3" /db_xref="GeneID:175443" /db_xref="GOA:Q86G90" /db_xref="InterPro:IPR000156" /db_xref="InterPro:IPR001876" /db_xref="InterPro:IPR011993" /db_xref="UniProtKB/TrEMBL:Q86G90" /db_xref="WormBase:WBGene00003795" /translation="MSDQKPNMGRIVASVVDVQQLMTMQFDSLIKSMDSLKIEHQTGV TQLRDDIRRSEDRFQKQLSDLSTNHGKELERLHQIIHTLLARDANPLGSMIPPQQLQQ QQQMLILQRQMEMAHVQAAQAQAHAHAQAQAQAQAQSQVMANLLNAAKPAIPVTQPLV ATTAQAKSTVPASGVIAPKTSPPEVVIPPAKPTFSTPTPAVVPKPATTGFSFGGTNPA TSIFGKKPETASPVVVPAAKDDEDEEHDEDYEPEGEFKPVIPLPDLVEVKTGEEGEQT MFCNRSKLYIYANETKEWKERGTGELKVLYNKDKKSWRVVMRRDQVTISEETLPSNIE NGTEELCWNIQVLKVCANFPILGSMTIQQMKSNEKAYTWFCEDFSEDQPAHVKLSARF ANVDIAGEFKTLFEKAVAEAKSSSNAGKTIDKEIKPAAEVKKEVKQEVVIPSNNKPEE TGFGDQFKPKPGSWECPGCYVTCKADEIECACCGTSKDGSVKEKNIFSKPSILQPAPG TPKVTFGFGASAPAKEPLAQTSQFGGSLSGSPSTSSSIFGGGTPKGTSVFGGGAANTP TFSFNKPAAAVNATTPSFNFNNPAASTASPATSTTPGNSLFGGGLSKTESTASSTTTP SFMFAKNSESAFPKPTFSFGKQQTPSTTAPAKQEENKQSETPKSVFGSGFTSGGATFA ALSANSAKSGSIFDAANVKKAQEELAAQKKASIFGSKNTTLNTTSATSHDGDETNEDG DGEYEPEVEFKPVIPLPDLVEVKTGEEDEEVMFSARCKLYKYYSDLKENKERGLGDIK LLKSNDNKYRIVMRREQVHKLCANFRIEKSMKLSPKPNLPNVLTFMCQDFSEDASNAD PAIFTAKFKDEATAGAFKTAVQDAQSKM" ORIGIN 1 catagttttt ccgtattttt acgaaaaata gctggaaaac attttttgtg cgtttaaaag 61 catattttat acagaaaaga ctagttttaa agctctcctt tcgcaatgag cgatcagaag 121 ccgaatatgg ggcgcattgt cgccagcgtc gtggatgtgc agcagttgat gacaatgcag 181 tttgactcgc ttatcaaaag catggactcg ttgaagattg agcaccagac cggcgtcacc 241 cagcttcgcg atgatattcg tcgatccgag gatcggtttc agaagcagtt gtccgatttg 301 agcactaatc acggaaaaga gctcgagaga cttcatcaaa ttatacacac tcttcttgct 361 cgtgatgcga atcctctcgg ctcaatgatt cctccacagc agcttcagca acaacagcaa 421 atgttgattc ttcagcgaca aatggagatg gctcatgtgc aggcagcaca agctcaagct 481 catgctcacg ctcaagctca agcccaagca caggcccaaa gccaagttat ggctaatttg 541 ctcaatgctg cgaagccagc tattcccgtt acacagccac tggtcgccac tacagcacaa 601 gcaaaatcga cagttccagc ttctggagtt attgcaccaa agacatctcc accagaagtt 661 gtaattccac ctgctaagcc aacattctct actccaacgc ctgcagttgt tccaaagcca 721 gccaccaccg gattctcatt cggcgggacc aatccagcta cttcaatctt cggtaaaaag 781 cctgaaactg cttccccagt cgtggttcca gcagctaaag atgatgaaga cgaagaacat 841 gatgaggatt acgagccaga gggcgagttc aagccagtca ttccactgcc agatcttgtc 901 gaggtgaaaa ctggagaaga aggagagcaa accatgttct gcaatcgttc aaaactctac 961 atttatgcca acgagacgaa ggaatggaag gagcgaggaa ccggcgagct gaaggttctc 1021 tacaacaagg acaagaagtc gtggagagtt gttatgcgac gagaccaggt gaccatttcg 1081 gaggagacac tcccttcaaa tattgagaat ggaaccgaag aattgtgttg gaatattcag 1141 gttctcaaag tctgtgccaa tttcccaatt ctcggctcga tgaccattca acaaatgaaa 1201 tccaacgaga aggcctacac atggttctgc gaggactttt ccgaagatca gccagctcac 1261 gtgaagcttt ccgctcgttt cgctaacgtc gatatcgctg gagagtttaa gactttgttc 1321 gagaaggctg tcgctgaggc aaaatcatcg agcaacgctg gaaagaccat cgacaaggaa 1381 atcaagccgg cggctgaggt gaagaaggaa gtcaagcaag aagttgtgat tccatcaaac 1441 aacaaaccgg aagagactgg atttggagat cagttcaagc caaaaccagg atcttgggaa 1501 tgccctggat gctatgttac ttgcaaagct gacgagattg aatgtgcctg ttgtgggaca 1561 tcgaaagacg gatctgtcaa agagaaaaat atattctcta aaccttcgat cctccagcct 1621 gccccaggaa ctccaaaagt gacattcgga ttcggagcat ctgctccagc caaggaacct 1681 cttgctcaaa catctcagtt cggtggatca ctcagcggat ctccaagcac tagcagtagc 1741 attttcggtg gtggaacacc aaagggaaca agcgttttcg gtggaggtgc tgctaatact 1801 ccaactttct cattcaacaa gccagctgcc gctgtcaatg caactacccc atcgttcaat 1861 ttcaacaatc ctgcagcttc aactgcttct ccggcaacct ctacgactcc aggaaattca 1921 ttgttcggag gtggactctc caagactgaa tctacagctt cttcaactac tactccgtcg 1981 tttatgttcg ccaagaattc tgaaagtgcc ttcccaaagc caactttctc attcggaaag 2041 caacagactc catcaacgac tgcaccagct aaacaagaag aaaataaaca gtccgagacg 2101 ccaaaatccg tgttcggtag tggattcacg tctggaggtg caacattcgc tgccctttca 2161 gccaactctg ccaaatctgg ctccattttc gacgcagcaa atgtcaagaa ggcccaagaa 2221 gaacttgctg ctcagaagaa ggcaagcatt ttcgggagca agaacaccac gttgaacacg 2281 acttctgcaa cttcacacga tggtgatgag acgaatgagg atggagatgg ggagtatgag 2341 ccagaagtcg agtttaagcc agttattcct cttccggatt tggttgaggt gaaaactggt 2401 gaagaggacg aggaggtcat gttctccgcc agatgcaagc tttataagta ctattcggat 2461 ctcaaggaga ataaggaacg tggactcgga gatattaagc tcctgaaaag caatgacaac 2521 aaatatcgaa tcgtgatgcg tcgtgagcaa gtccataagc tctgtgccaa tttccgtatc 2581 gaaaagtcga tgaagctcag tccgaagcca aacttgccaa atgtgctcac atttatgtgc 2641 caggacttct cagaagacgc ctccaacgct gatccagcca tcttcaccgc caaattcaag 2701 gacgaggcga ccgccggagc attcaagacg gctgttcagg atgctcaatc gaagatgtaa 2761 tcctctgctg attatttaaa ttattttatt attgttattc ctccccaccc agcactctgt 2821 gttagtattc cccaccacca attttattta tgaacctagt tttattcatc cccatctgct 2881 gtcatctata gtcctttaag tgtagtttat atttgtctgg taaggttttt aaaaaaataa 2941 tttccttatt tcccccccat ctctctcaaa atcccattgt tctcataagt accccccaca 3001 cactatcatt cataattttt gtctttaaaa cttaactata ttgttcacat tgtcccggca 3061 tcgatttttc cccactggtg acaatccaat aaattgtgaa tgcattgaag a //