Dbfetch
LOCUS NM_171636 1862 bp mRNA linear INV 04-SEP-2019
DEFINITION Caenorhabditis elegans Nuclear hormone receptor family member
nhr-40 (nhr-40), mRNA.
ACCESSION NM_171636
VERSION NM_171636.6
DBLINK BioProject: PRJNA158
BioSample: SAMEA3138177
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 1862)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 1862)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (04-SEP-2019) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 1862)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (30-MAY-2019) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 1862)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003284).
On Sep 4, 2019 this sequence version replaced NM_171636.5.
FEATURES Location/Qualifiers
source 1..1862
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="X"
gene 1..1862
/gene="nhr-40"
/locus_tag="CELE_T03G6.2"
/db_xref="GeneID:180560"
/db_xref="WormBase:WBGene00003630"
CDS 95..1414
/gene="nhr-40"
/locus_tag="CELE_T03G6.2"
/standard_name="T03G6.2a"
/note="Confirmed by transcript evidence"
/codon_start=1
/product="Nuclear hormone receptor family member nhr-40"
/protein_id="NP_741729.1"
/db_xref="GeneID:180560"
/db_xref="WormBase:WBGene00003630"
/translation="MPNNKREKIPEGTLCVVCSDFASGIHYSVASCNGCKTFFRRALV
NKQTFTCQFSGDCVVGKSVRCVCRSCRLKKCFDMGMDPKAIQHDRDKIRYTKALKKKR
EEEKRLKEMVIKEDIGSPQSIASDTYINTSTPSSSTMINILENDHHSYDPEAQNDVKA
VIEDLLRLESRVKSLRNSYRFESQVSATSCMYSSFLFFSCLLDDITYMAENTHENEGT
IEPFECSVEKLREWFVRDLSLMLEWGKCLPIMERLLLNDKLALMKAFAPIFPLIQLAF
YTRNEFECDIVIKLEPDCTPKPIPERLNYPDGSFIEKGNKPANTWEEMHTMLIDGCYK
MMRQLKIKESTFVLYKMLLFHNPDADGLSSLGKKTIENERMRLLTQLFSYLSTERGKE
AQTIFSNLLMMSATLSKTASFIKRVFDFNHIFNRTNDLIDQLIIVGL"
ORIGIN
1 aattggttct gctggattcg cgttttcgta cccccgctga tgtataggat tatgtggcaa
61 ttgtgaatga cgagacttct cgagatagtg aaaaatgccg aataacaaaa gggaaaaaat
121 cccggaagga acactttgcg tggtatgcag cgattttgcg agcggtattc attattcggt
181 ggcaagctgc aacggctgca agacattctt ccgacgtgcc ctcgtaaaca aacaaacgtt
241 tacgtgtcaa ttttctggag attgcgtagt gggaaaatcg gttcgatgcg tctgcagaag
301 ttgtcggctg aaaaaatgct tcgatatggg aatggatccc aaggcgatcc aacatgatcg
361 agacaaaatc cgatatacga aagctctcaa aaagaaacgg gaagaagaaa aacggttaaa
421 agaaatggta ataaaagagg atattggaag cccccaaagt atcgcatctg acacatatat
481 caacacatct actccatcat ctagcactat gatcaacatt ttagaaaacg atcatcattc
541 ttatgatccc gaagcacaga acgatgtaaa agctgttatc gaagatttat tacggttaga
601 gtcaagagtg aagtcactta ggaactcata tcgcttcgaa tctcaagtgt ctgccacatc
661 ttgcatgtac tccagctttt tatttttcag ctgcttactg gatgacatca catatatggc
721 agaaaacaca catgaaaacg agggcacaat tgaaccattc gagtgttctg tggagaagct
781 gagggaatgg tttgtgcgag atttgtcgtt aatgctcgaa tggggcaagt gcttaccgat
841 tatggaaagg ttactactca acgacaagct tgccctgatg aaagctttcg caccaatatt
901 tccattgatt caactagcat tctacacgag aaacgaattt gaatgtgata ttgtgataaa
961 actcgaaccg gattgtacgc ctaaaccaat tccagaacgg ctcaattatc cagatggctc
1021 atttatcgaa aagggcaata agccagcgaa tacttgggaa gagatgcaca cgatgctaat
1081 tgacgggtgc tacaaaatga tgaggcagct caagatcaaa gaatcaacat ttgtgcttta
1141 caagatgctg ctcttccata atccagatgc tgatggacta tcctcacttg gaaaaaagac
1201 gattgagaat gagaggatgc gtttgctgac tcaattgttc agctatctgt caacggaacg
1261 aggaaaagaa gctcaaacaa ttttctccaa tctgctgatg atgtcagcaa cgttgagtaa
1321 aacagcatca ttcatcaaac gtgtattcga cttcaatcat atcttcaatc gaaccaatga
1381 cttgatagat cagctcatta tcgttggctt gtagatcttc cattgttgtt ctccctccct
1441 gttgcaaagt attcacatct cgaaataccg atattctctt acatttccat gtttttaaac
1501 aaagatctca agaaaattac attggaatag ttctcaaata gctgaaataa taataatgga
1561 attttctagt tgagacggtt tcactgtatg tttctctctc atgtagtcac aaatttttgt
1621 ccatatgcat tttcattttt cattctggag ttccacgtgc ttctcatttt gtcatcctag
1681 tgttttgttt tacagtcctg tttccaaata tctcttttct tccatccagt ttgcatgaag
1741 aataatacga ttggtattcg ggtaagctag agagtctatt ttttagttca agcagatttc
1801 tattgaaaaa agaccgcccc atttatttgt tgacttgcca taaatttatt gggataaaga
1861 ca
//