Dbfetch
LOCUS NM_171332 2046 bp mRNA linear INV 22-NOV-2023 DEFINITION Caenorhabditis elegans Leucine-rich repeat protein soc-2 (soc-2), mRNA. ACCESSION NM_171332 VERSION NM_171332.5 DBLINK BioProject: PRJNA158 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 2046) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 2046) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2046) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 2046) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003282). On Apr 15, 2020 this sequence version replaced NM_171332.4. FEATURES Location/Qualifiers source 1..2046 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="IV" gene 1..2046 /gene="soc-2" /locus_tag="CELE_AC7.2" /db_xref="GeneID:177286" /db_xref="WormBase:WBGene00004929" CDS 9..1685 /gene="soc-2" /locus_tag="CELE_AC7.2" /standard_name="AC7.2b" /note="Confirmed by transcript evidence" /codon_start=1 /product="Leucine-rich repeat protein soc-2" /protein_id="NP_741391.2" /db_xref="EnsemblGenomes-Gn:WBGene00004929" /db_xref="EnsemblGenomes-Tr:AC7.2a.1" /db_xref="EnsemblGenomes-Tr:AC7.2a.2" /db_xref="GeneID:177286" /db_xref="WormBase:WBGene00004929" /translation="MRVLQKLGFCLEKQKRETPPTTANTGVSATKRVSVIATDRDRAY FLRQKNMRNNKGHAEKDLLKEFHKCKEAQDQRLDLSSIEITSIPSPIKELTQLTELFL YKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPSVI YKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSAIGKLTSLVVCLVS YNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRYNKIRCIPSELE SCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINM EHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQLKVLPED IEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQHLTKLWV QSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFE LALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYLKMQGPYRGVVMNSQ" ORIGIN 1 aaaaaataat gcgtgtactt caaaaattgg gattctgcct tgagaaacag aaacgggaaa 61 cacctccaac tacagcaaat acgggagtat cggcgacgaa gcgtgtttcc gtgattgcca 121 ctgacagaga tagagcctat tttttgaggc agaagaatat gaggaacaat aagggccacg 181 ctgaaaagga cctcctaaaa gaatttcaca aatgcaaaga ggcgcaggat cagagattag 241 atttgagctc aatcgagatc acgagcattc cgtcgccgat caaagagctc acacagctga 301 cagaattgtt cttgtacaag aacaagttga cgtgcttgcc aacggaaata ggtcaactgg 361 tgaatctcaa gaaacttggt ctctctgaaa atgcgcttac atctcttccg gattcacttg 421 cttctctgga atcactggaa acattggatt tacggcacaa caagttgaca gaggttccat 481 cggtcattta caaaatcggg tcgctcgaaa cattatggct gaggtacaat cgaattgtgg 541 cagttgacga acaaattgga aatctgtcaa aattgaaaat gttggatgtt cgtgagaata 601 agattcgaga gttaccatct gcaattggaa aactgacgtc actggttgtg tgtcttgtct 661 cttataatca tttaacacgg gttcctgaag aaatcggtga ctgccattcc ctgactcaac 721 tcgatcttca acacaacgac ctctcagaac taccgtactc aataggaaaa ctcgtgaatc 781 ttgttcgaat cggaattcga tacaataaga ttcgatgtat tccaagtgaa ttggaaagtt 841 gtcagcagct cgaggaattt attgtagaga gcaatcattt gcaattacta ccgccaaacc 901 tgctcacaat gcttccaaaa atccacacag tgaatctctc acggaacgag ttgactgcat 961 tcccggcagg cggacctcaa caatttgtgt ccacagtcac aattaatatg gaacacaatc 1021 agatttcaaa gattccaatc ggaatattct cgaaagcaac acgattaaca aaactgaatt 1081 tgaaggaaaa tgagctggtc tcgttgcctt tggacatggg atcttggaca tcaatcaccg 1141 agctcaatct ctccacaaat caattgaaag ttttgccaga agatatcgaa aaacttgtga 1201 atctggaaat ccttgtgctg tccaacaatc aactgaaaaa gcttccaaat caaataggaa 1261 atctcaataa actccgcgag ctggatctcg aggaaaatga attggagacc gttccaactg 1321 aaatcggatt tttacaacat cttacgaaac tgtgggttca gtcaaacaag attttgactc 1381 taccaagatc cattggaaat ttgtgttcgc ttcaagattt gcgattggga gagaacaatt 1441 tgacagcgat tcccgaggaa attggccacc tcgactcatt gaaatctcta tacctcaacg 1501 acaactcctc tcttcacaat ttgccatttg agttggcact gtgccaatcg cttgaaataa 1561 tgtcaatcga aaactctcca ctttctcaga ttccacctga aatcactgct ggtggtcctt 1621 cacttgtgat acaatatctt aaaatgcaag gtccctatcg aggagttgtg atgaattctc 1681 aataattccc ccaatattct acttcaattc aaaaaaccat gtttcttgtc ttctacgggt 1741 tgcaaaactt gttttcgctc caaaatgttt tttttaatgt tttatttttt tgaaactgaa 1801 aagtcacttt ttcttctcaa aatatcatat taatatggta cttttccaat tcaattgtgt 1861 cttcccgatt ttttctctca aaaaaggttt tgtttattaa ttattttcaa attgtgaatt 1921 ccaaaaactt tctctcgtcc agtttcccag ctcccccgtt gcatttcccc cttcttccaa 1981 aaattttttt ataatttttt gttccaaaat tcttgtttct tttaatgaat tctaacaaaa 2041 tcagaa //