Dbfetch
LOCUS NM_077135 4443 bp mRNA linear INV 09-APR-2019 DEFINITION Caenorhabditis elegans Apical junction molecule (ajm-1), partial mRNA. ACCESSION NM_077135 VERSION NM_077135.1 DBLINK BioProject: PRJNA158 BioSample: SAMEA3138177 KEYWORDS RefSeq. SOURCE Caenorhabditis elegans ORGANISM Caenorhabditis elegans Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis. REFERENCE 1 (bases 1 to 4443) AUTHORS Sulson,J.E. and Waterston,R. CONSRTM Caenorhabditis elegans Sequencing Consortium TITLE Genome sequence of the nematode C. elegans: a platform for investigating biology JOURNAL Science 282 (5396), 2012-2018 (1998) PUBMED 9851916 REMARK Erratum:[Science 1999 Jan 1;283(5398):35] REFERENCE 2 (bases 1 to 4443) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (09-APR-2019) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 4443) AUTHORS WormBase. CONSRTM WormBase Consortium TITLE Direct Submission JOURNAL Submitted (16-JAN-2019) WormBase Group, European Bioinformatics Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org REFERENCE 4 (bases 1 to 4443) AUTHORS Sulson,J.E. and Waterston,R. TITLE Direct Submission JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute at Washington University, St. Louis, MO 63110, USA COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This record is derived from an annotated genomic sequence (NC_003284). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..4443 /organism="Caenorhabditis elegans" /mol_type="mRNA" /strain="Bristol N2" /db_xref="taxon:6239" /chromosome="X" gene <1..>4443 /gene="ajm-1" /locus_tag="CELE_C25A11.4" /db_xref="GeneID:181148" /db_xref="WormBase:WBGene00000100" CDS 1..4443 /gene="ajm-1" /locus_tag="CELE_C25A11.4" /standard_name="C25A11.4a" /note="Confirmed by transcript evidence" /codon_start=1 /product="Apical junction molecule" /protein_id="NP_509536.1" /db_xref="EnsemblGenomes-Gn:WBGene00000100" /db_xref="EnsemblGenomes-Tr:C25A11.4a" /db_xref="GeneID:181148" /db_xref="GOA:A0A1C3NSL9" /db_xref="InterPro:IPR002893" /db_xref="InterPro:IPR038825" /db_xref="UniProtKB/Swiss-Prot:A0A1C3NSL9" /db_xref="WormBase:WBGene00000100" /translation="MDATSERPRSPLDLPPPPASVVLHPSAPPPPPPPLSSTEVVGNT TTTTTTHYAPKTWNDPSITTAPKIPVSLLSGAQPLPSVLTQRTTTSSYSAPNYSASSM SGVPSDVAPPPPLPIPNQSSSSAASYQHHHASSISKSISSSREDLLSEHATSRSTVRE IPVHRAPSTAPSHSSVFEYHMMPTTTSTYHHVETPSDEYYRREVMTRTIITRSTEALS QTPLGRPASPLDRYLPYPTTTTTTSGDGRTREEKTVDYKVTYHRDIEEQERRIREDQA RRQQEEQDRRDREDNARRILAQREHQEMERLREQQNLSERALAERERADKERLQQERL LRQQREKKRREEWDRLESIRLAEEEAELARRRALEKERIDREKAEEERKTMERLERER ARLERERLEEERRQKEKAETERIERERREHERIEIERIERIKRERIERERREREEKKA EEDRLLRERLELERIERERRELEARERQELELQRREAEDRERQRLEDEAREMRRREEE RREAELVADVHRQAEERERLRKRQEREEAERLERIRLEQQKIDMERIDAERRERERKE EERREFELIEAARRKKEARDRDRLDEMERERVREEEERREKERREQERRIAAEKERKR RQEEEEEIARLNELQRAAAARQAQRNAELDRQRQRDELDRKAQELSEREMREKERRDR ERANEEAQLADLLERERHNQLIRENERREAVERANNRRLEDRRSRDKLDHIVRERSEK EQFELEKRRLLAEKEAMNRKKNHLLSSETLAKLTQPMYYTTREPEVTTKVERQVIERI DRNVWVEDVPYAPSQSAMGYLDNDENNRDRLYNPNDLNRNGSSRSRYQRAKNEKARRD FYHSSQDSADPVTERFRKSTDDLTTRSRPEYRGPLLQKFHDSEFRTTALNETDGLPYR RMGPSPYEQPFAKLLEETERRYAHYNSRASNPSIYQSSRYYYPERHGQPQHTDNTRAE SVVAYERESRRESPADQAHIRSRSADYLMDRRIREETEVPENQLQKTRVEPHDQSPRE SRISEYEMRFRKSTEKLTVPDWYRENRPQGQTAQTSTYRYGNGVEPMSTTTTTTTVIN GTSSHQQAPPPVPPQPIGNIGLPRGMFDRYKDDIEELRRSRSSLHQTGQQETSNRQGS TLSVGGIVDQGHALPGYTVSEVPNAWNLHTSRTSRVVEVADTFVGTSSHEYGNFTNRY GGRVTIEEVLDSIFQKVTPTNQRLNFDRSYPQADELFQGNVDGPGIYTNNYSVMRQVL KSPERAEHILQNEELFVRCTECHRTRELSAARLFFVSCKHCYTYYCSRECRHNNWPNH SGRCSFARINTLCKDVIMKVREDEQAQAFMSKVARDGFSVSGRGSVNIRLSSPQLAQA YVSNGWRALSAYPNDQLLYYYTVKALIAERKEPSLIALCNRYEPREKFILSVSIIADI EHCPETPPPETRELSAVQFSSPRSRYEAIQNQNAPYFSEFAHNV" ORIGIN 1 atggatgcaa ccagcgagcg tccaagatca ccattagacc ttccacctcc accagcatca 61 gttgttcttc atccgtctgc tcctccaccg ccaccgcctc cattgagctc gacagaagtt 121 gttggaaata ctaccactac aactacgacg cactacgctc caaaaacgtg gaacgatccg 181 tccatcacaa ctgctccaaa aattccagtt tccttactgt caggagcaca accactgcca 241 agtgttttaa cacaaagaac cactacaagc tcttacagtg ctccaaatta ttcagcttct 301 tcaatgagtg gtgttccgag tgatgttgcg ccgcctccac cgctaccgat cccgaatcag 361 tcgtcatcat ctgcagccag ctatcaacac catcacgcat cttctatctc aaagtcaatc 421 agttcgtccc gcgaagatct tctctcggaa cacgcgacgt ctcgatccac tgttcgcgag 481 atcccggtgc atcgcgcgcc gtcaacggca ccctcgcaca gcagcgtctt tgaataccat 541 atgatgccaa caacaacctc cacataccat catgtggaga caccatcgga cgagtactac 601 cgacgagaag tgatgacaag aacaattatt actagaagca cagaagcatt gtcacaaaca 661 cctctcggaa gacctgcatc acctctggac agatatcttc catacccgac cacaacaaca 721 actactagcg gtgacggcag aactcgcgag gagaaaaccg ttgattataa ggtcacttat 781 caccgagaca ttgaagaaca ggagcgtaga atcagagagg atcaagcacg gcgtcaacag 841 gaagagcagg atcgtcgtga tcgtgaagat aatgccagaa gaatattagc acaaagagaa 901 catcaagaaa tggaacgtct tcgtgagcag cagaaccttt ctgaaagagc acttgctgaa 961 cgagagcgcg cagacaaaga acgtcttcaa caagaacgtc ttctccgcca acaacgtgaa 1021 aagaaacgtc gtgaagaatg ggatcgcctt gagagcatac gtctagctga ggaagaagca 1081 gaacttgcac gacgcagagc actcgaaaaa gagcgcattg atcgtgaaaa agctgaagaa 1141 gagagaaaaa caatggaacg tcttgaaaga gagcgtgctc gtttggaaag agaacgtctc 1201 gaagaagaac gtcgccaaaa ggagaaagcc gagacggaga gaattgaacg tgaaagacgt 1261 gaacacgaaa gaatagaaat cgaacgtatc gaaagaatca aaagagaaag aatagaacgg 1321 gagcgtcgtg agcgtgaaga gaaaaaggca gaggaggacc gtctgcttcg agaacgtctt 1381 gaattggaac gaatcgagcg tgaacgtcgc gagctggaag ctcgagagcg tcaggaactt 1441 gagcttcaac gtcgtgaagc tgaagaccgg gaacgccaac gtctcgaaga tgaggctcgc 1501 gagatgcgcc gtcgtgaaga agagcgccga gaagcagaat tggttgcaga tgtccataga 1561 caagctgaag aacgtgaacg actccgcaag cgtcaagagc gtgaagaggc tgaacgtttg 1621 gaaagaatcc gtcttgagca gcagaagatt gacatggaaa gaattgacgc tgaacgacga 1681 gaacgggaga gaaaagaaga agagcgacga gaatttgagc ttattgaagc agcaagacgg 1741 aagaaggaag ctcgtgatcg tgatcgtctt gatgagatgg aacgcgagcg cgtaagagaa 1801 gaagaagagc gcagagaaaa ggagcgccgt gaacaagaac gtagaattgc cgctgagaaa 1861 gagcgcaaga gaagacaaga agaggaggaa gaaattgctc gtctgaatga acttcaaaga 1921 gctgctgctg ctcgccaagc ccaacgtaac gcagaacttg accgccaaag acagcgtgat 1981 gagctggacc gaaaggccca agagctttcg gagcgggaaa tgcgagaaaa ggaacgtcgt 2041 gatcgtgaac gagccaatga agaggctcaa ctagctgatc ttttggaacg tgaacgccac 2101 aatcaactca ttcgtgaaaa cgagcgaaga gaagctgttg agcgtgccaa caatcgtcgt 2161 ctggaagaca gaagatcacg cgacaagttg gatcacattg tacgtgaaag atccgaaaag 2221 gagcaatttg aactcgagaa gcgcagactt cttgccgaga aggaggcaat gaacagaaag 2281 aaaaaccatc tgttgagcag tgaaactctt gcaaaactta ctcagccaat gtactacacg 2341 actcgcgaac cagaagtcac cactaaagtg gaaagacaag ttatcgagcg tattgaccgt 2401 aacgtatggg ttgaggatgt gccatatgct ccaagccaga gtgccatggg ttatttggat 2461 aatgacgaga acaaccgtga tcgtctttac aacccgaatg atttgaatag aaacggatcc 2521 agcagaagcc gctaccaacg tgccaaaaat gagaaagccc gccgcgactt ctaccattca 2581 tcacaggatt ccgcagatcc agttactgag cgttttcgta aatccactga tgacttaaca 2641 actcgttctc gcccagaata tcgtggccca ttgcttcaaa agttccatga ctctgaattc 2701 cgaaccaccg ctctaaatga aaccgacggt ttgccatatc gcagaatggg gccaagtcca 2761 tatgagcagc cgttcgcgaa acttctcgaa gaaaccgaaa gacgctacgc tcattacaac 2821 agccgtgcca gcaacccgtc tatttaccag tcaagccgtt attactatcc ggagaggcat 2881 ggacagccac agcacacgga caatactcgt gccgagtccg tagttgccta cgaacgtgag 2941 agccgccgtg aatcaccagc agaccaagct cacatcagaa gccgttctgc agattatctc 3001 atggatagaa gaatccgtga agaaaccgag gttccagaga accaacttca aaaaactcgc 3061 gtggaacctc atgatcagtc accacgggaa tctcgtattt cagaatatga aatgcgcttc 3121 cgcaaatcaa ccgagaagct aaccgttcct gactggtacc gtgaaaacag accacagggt 3181 caaactgctc aaacttcaac ctaccgatat ggaaatggag ttgagccaat gagcaccaca 3241 acaacaacca ctactgttat taatggaaca tcttctcatc agcaagcacc ccctccagta 3301 ccaccacaac caattggaaa cattggactg ccgcgtggca tgtttgatag atacaaggat 3361 gacattgaag agctccgacg ctcccgctca tcacttcatc aaactggtca acaggaaacg 3421 tcgaaccgac agggatcaac gctgagtgtg ggtggcattg tcgatcaagg acacgctctc 3481 ccaggctaca cagtgtcaga agtgccgaat gcgtggaacc tgcatactag ccgcacttct 3541 cgtgtcgtcg aggtcgccga cacgtttgtc ggtacttctt cacatgaata cggaaacttc 3601 acaaatcgtt acggaggccg agttacaata gaagaagtgc tcgactcaat cttccagaag 3661 gtgactccaa cgaatcagag actaaatttt gacaggagtt acccacaagc tgacgagtta 3721 ttccaaggaa acgttgatgg cccaggaatt tatacgaaca actatagcgt gatgcgtcaa 3781 gtgctcaaat cgccagaaag agctgagcac attctacaaa atgaggagtt attcgttaga 3841 tgtactgaat gtcacagaac cagagaacta tccgcagcta gactcttttt tgtgtcctgc 3901 aagcactgct acacatacta ctgctctaga gaatgcaggc ataacaattg gccaaaccac 3961 tcgggaagat gttcttttgc acgaattaat acattatgta aagatgttat catgaaagtt 4021 cgagaggatg aacaggctca agctttcatg tcgaaagtcg ccagagacgg tttttcagtt 4081 agtgggagag gaagtgtgaa tattcgtctg tcatccccac aactcgcaca ggcatacgtc 4141 agcaacggat ggagagcact ttccgcttat ccaaatgacc aacttctcta ttactacact 4201 gtcaaagctt tgattgctga aaggaaagaa ccttctttga ttgccctttg taatcggtat 4261 gaaccaagag aaaagttcat tctttccgtg tctatcattg ctgacatcga gcactgccca 4321 gagactccac ctccagagac acgcgaactc tcagccgtcc aattctcctc tcctagatcc 4381 cgctacgaag ccattcagaa tcaaaatgct ccatacttct cagaatttgc acacaatgtc 4441 tag //