Dbfetch
LOCUS NM_064773 911 bp mRNA linear INV 22-NOV-2023
DEFINITION Caenorhabditis elegans E2 ubiquitin-conjugating enzyme (ubc-20),
mRNA.
ACCESSION NM_064773
VERSION NM_064773.6
DBLINK BioProject: PRJNA158
KEYWORDS RefSeq.
SOURCE Caenorhabditis elegans
ORGANISM Caenorhabditis elegans
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
Caenorhabditis.
REFERENCE 1 (bases 1 to 911)
AUTHORS Sulson,J.E. and Waterston,R.
CONSRTM Caenorhabditis elegans Sequencing Consortium
TITLE Genome sequence of the nematode C. elegans: a platform for
investigating biology
JOURNAL Science 282 (5396), 2012-2018 (1998)
PUBMED 9851916
REMARK Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE 2 (bases 1 to 911)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (22-NOV-2023) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 911)
AUTHORS WormBase.
CONSRTM WormBase Consortium
TITLE Direct Submission
JOURNAL Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE 4 (bases 1 to 911)
AUTHORS Sulson,J.E. and Waterston,R.
TITLE Direct Submission
JOURNAL Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
at Washington University, St. Louis, MO 63110, USA
COMMENT REVIEWED REFSEQ: This record has been curated by WormBase. This
record is derived from an annotated genomic sequence (NC_003281).
On Feb 2, 2021 this sequence version replaced NM_064773.5.
FEATURES Location/Qualifiers
source 1..911
/organism="Caenorhabditis elegans"
/mol_type="mRNA"
/strain="Bristol N2"
/db_xref="taxon:6239"
/chromosome="III"
gene 1..911
/gene="ubc-20"
/locus_tag="CELE_F40G9.3"
/db_xref="GeneID:175185"
/db_xref="WormBase:WBGene00006715"
CDS 4..603
/gene="ubc-20"
/locus_tag="CELE_F40G9.3"
/standard_name="F40G9.3"
/note="Partially confirmed by transcript evidence"
/codon_start=1
/product="E2 ubiquitin-conjugating enzyme"
/protein_id="NP_497174.1"
/db_xref="EnsemblGenomes-Gn:WBGene00006715"
/db_xref="EnsemblGenomes-Tr:F40G9.3"
/db_xref="GeneID:175185"
/db_xref="GOA:Q9TZ69"
/db_xref="InterPro:IPR000608"
/db_xref="InterPro:IPR009060"
/db_xref="InterPro:IPR016135"
/db_xref="InterPro:IPR023313"
/db_xref="UniProtKB/TrEMBL:Q9TZ69"
/db_xref="WormBase:WBGene00006715"
/translation="MSNIAFNRLQRECKEVVTNSEISETGIMIEILNENLTEIKGHIR
GPPDTPYAGGMFDLDIKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAA
SLTLRTVLLSIQALMCTPEPKDPQDAVVAKQYMEKPAVFKATAEYWTTKFAKGAVKNA
GYQALVDKLKDMGVREEEAVSVLSCNNWDINRSTVYIFS"
ORIGIN
1 accatgtcga acatagcatt caacagactc caacgagaat gcaaagaggt cgtcacaaac
61 tcggaaatca gcgaaaccgg aattatgatc gagatattga acgagaatct caccgaaatc
121 aagggacaca tccgcggtcc accagacact ccatacgccg gtggaatgtt cgatttggat
181 attaagattc cagaccaata tccattctcg ccaccaaatg tcaagttcag cacaaaaatc
241 tggcacccga atgtcagctc gcagaccggc gtcatttgcc tcgatattct taaggatcaa
301 tgggccgctt cgctgactct tcgcacggtt ctcctgtcga ttcaggcgtt gatgtgcaca
361 ccggagccca aggatcctca agatgccgtc gtcgccaagc aatacatgga gaagccagca
421 gttttcaagg ccaccgccga gtactggacg acaaaattcg caaagggagc cgtgaaaaac
481 gccggatacc aggctctcgt cgacaagctc aaggatatgg gagtccgtga ggaagaggct
541 gtcagcgtgc tcagctgcaa caattgggac atcaatcgct cgacggtcta cattttctct
601 taaattcttt tttattcgat ttttttgaat tttttctgtg agcctcttgt cttgaagttt
661 gtgtcctaaa aatcccttat ttcttccatt tttttccgag aaattttcgt ccccaacccc
721 ccgcaccact ggtatttctt tttaccaatt cgtaccatcc tcaccccaaa aaaaccgatc
781 agaatagtag attttccgcc tgatttgtgt gtgttttgcc tatttattat cgatattatt
841 cattgaaatt tccccccttt gacccccatt ttttttgcaa cgatactctt tccatgaatt
901 atattgacgg a
//